| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is trxA [H]
Identifier: 220903403
GI number: 220903403
Start: 151657
End: 151974
Strand: Direct
Name: trxA [H]
Synonym: Ddes_0117
Alternate gene names: 220903403
Gene position: 151657-151974 (Clockwise)
Preceding gene: 220903402
Following gene: 220903404
Centisome position: 5.28
GC content: 60.38
Gene sequence:
>318_bases ATGATTATTGTCGACAAGGAAAACTTTGAAGCCGAAGTGCAGCAGAGCGCCATGCCCTGCGTGGTGGACCTGTGGGGTCC GCAGTGCGGTCCCTGCCTGGCCCTTATGCCCGCTGTGGAAGAGCTGGCCGCAACCTATGAAGGCAAGGTCAAGTTCTGCA AGCTCAATGTGGCGGAAAACCGCCGCCTGGTCATCGGCCTGCGCGTCATGGCCGTGCCGACCATCCTGTTTTACAAGGGT GGCGAGTGCGTGGCCCGCCTGACCGGCGATGCCGTGTCCGTTGAATCCATCAAGGCTGAAGCGGACAAGCTGCTGTAG
Upstream 100 bases:
>100_bases CCGGCAGGCGGGCCGCCCTGAGTCGGAGCCGTCCGGCACAGGCCCCGGCCCGCCTTTATCTATAAAGTTTCAACCATCCG CAAGCAAAGCGAGGTGCATG
Downstream 100 bases:
>100_bases CAGTTTCGCGTCGGGGCGGGCCGGTACGGCCTGCCCGGCGCCTGGATGAGGATGACGGGCCGCCGCATGGCCCGTATTGG CAGAACGCCCATAATCTCAA
Product: Thioredoxin domain-containing protein
Products: NA
Alternate protein names: Trx [H]
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MIIVDKENFEAEVQQSAMPCVVDLWGPQCGPCLALMPAVEELAATYEGKVKFCKLNVAENRRLVIGLRVMAVPTILFYKG GECVARLTGDAVSVESIKAEADKLL
Sequences:
>Translated_105_residues MIIVDKENFEAEVQQSAMPCVVDLWGPQCGPCLALMPAVEELAATYEGKVKFCKLNVAENRRLVIGLRVMAVPTILFYKG GECVARLTGDAVSVESIKAEADKLL >Mature_105_residues MIIVDKENFEAEVQQSAMPCVVDLWGPQCGPCLALMPAVEELAATYEGKVKFCKLNVAENRRLVIGLRVMAVPTILFYKG GECVARLTGDAVSVESIKAEADKLL
Specific function: Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions [H]
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI21361403, Length=87, Percent_Identity=37.9310344827586, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1788936, Length=75, Percent_Identity=37.3333333333333, Blast_Score=69, Evalue=8e-14, Organism=Escherichia coli, GI87082331, Length=89, Percent_Identity=31.4606741573034, Blast_Score=65, Evalue=8e-13, Organism=Caenorhabditis elegans, GI212646193, Length=83, Percent_Identity=37.3493975903614, Blast_Score=65, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005746 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR013766 - InterPro: IPR012335 [H]
Pfam domain/function: PF00085 Thioredoxin [H]
EC number: 1.8.1.8 [C]
Molecular weight: Translated: 11415; Mature: 11415
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIVDKENFEAEVQQSAMPCVVDLWGPQCGPCLALMPAVEELAATYEGKVKFCKLNVAEN CEEECCCCCHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCC RRLVIGLRVMAVPTILFYKGGECVARLTGDAVSVESIKAEADKLL CEEEEEEEHHHHCEEEEECCCCEEEEECCCEECHHHHHHHHHHCC >Mature Secondary Structure MIIVDKENFEAEVQQSAMPCVVDLWGPQCGPCLALMPAVEELAATYEGKVKFCKLNVAEN CEEECCCCCHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCC RRLVIGLRVMAVPTILFYKGGECVARLTGDAVSVESIKAEADKLL CEEEEEEEHHHHCEEEEECCCCEEEEECCCEECHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8223622; 1995593 [H]