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The map label for this gene is epsD [H]

Identifier: 220903394

GI number: 220903394

Start: 141243

End: 142391

Strand: Reverse

Name: epsD [H]

Synonym: Ddes_0108

Alternate gene names: 220903394

Gene position: 142391-141243 (Counterclockwise)

Preceding gene: 220903396

Following gene: 220903393

Centisome position: 4.96

GC content: 63.79

Gene sequence:

>1149_bases
ATGAAGATCATCGTTCTGGGCAACCAGGCCAGGTCCATGAGCAATTTCTGGAGCGTGCTGATCCGCCGGATGCATCGCGC
CGGACATGAGGTTGTCTGCTGCGCCCCGCCGGGAGACCCCGGTTCGGAGGCGGCGCTGGCAGCCCAGGGCGCACGCCTGC
TGCATTACCCCCTTGACCGCAAGGGCCTCAACCCCCTGCGCGATCTGCGCACCACCGGGGCCTTGCTGCGCCTGTTCAAG
GCTGAAAAGCCCGACCTGCTTTTCAGCTCTACCATCAAACCCGTCATCTACGGCTGCATTGCCGCGCGAGTGGCGGGGAT
TCCGCACGTGTACGCCACCATAACGGGCCTGGGTTACGCCTTTGAGGCCGACAGCTTTTTCAAAAAATGCGTTAACAGGC
TGAGCGCCCTGCTCTACCGCACGGCCCTGGCCGGGACTGAAGGCGTATTTTTCCAGAATGACGATGATATTGCCGTGTTT
CGGCGAGCTGGCATTCTGGGCGCGCGGGCGCGCATACTCAAGGCGCGCGGCACCGGGGTGGACACCAGCCGCTTTGCCCC
CGCCCCGCTGCCCGGGCTGGAGGCTGACGGCAGCCTTGAAGGACCGCCGGTTTTTCTGCTGGTAGCCCGGCTGCTTGAAG
CCAAAGGGCTTGAAGAATACGCCCAGGCGGCCCGTACGCTCAAGGCGGCGCACCCCCAGGCACGTTTTCTGCTGCTCGGC
CCGGCCGAACAGGGGCTTGGCAGCATAAGCCTTGAAACCGTGCGCCAGTGGCAGACCGAGGGCTGCATAGAATACCTTGG
CGAAACGCGCGATGTGCGCCCCTATGTGAGCGCCGCCCATGTGATGGTGCTGCCCTCCTGGCGCGAAGGCACGCCCACCT
CCATCATGGAGGGCATGAGCATGGGCCGCGCAGCGGTGGTGACAGATGCCCCGGGCTGCCGTGAGGTTGTGCGCGACGGC
TATAACGGCTATCTTGTACCTTTGCGCGACCCGCAGGCCCTGGCGGCGGCTATGGAAAAATTTATCCGGCAGCCGAAGCT
TATGGCTGAAATGGGGGCCAACGGCCGCCGGATGGCCGTGGACGAATTTGACGCAGAAAAGGTCGCCGTGCGCATTCTTG
AAGACATGCGCGTACCCGCGCTTGCGTAA

Upstream 100 bases:

>100_bases
CCCTTTTCACTTATCCTGCCAGGTGCTATACATTGGCGCATGCGTTCGCGAGCCGGCACAACAGCAAAACGGCGCGACGC
GCAAAGGGAGATGCAGGCAA

Downstream 100 bases:

>100_bases
GCTGACGAAAATGCACATGCCGGCAAAAATGTGCTGCGGTTCAACCGTGCACCGTGCGCGGCTGGGCCTCAGGTCCGGGT
CTCATGCAGGGCGGAGGGCT

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MKIIVLGNQARSMSNFWSVLIRRMHRAGHEVVCCAPPGDPGSEAALAAQGARLLHYPLDRKGLNPLRDLRTTGALLRLFK
AEKPDLLFSSTIKPVIYGCIAARVAGIPHVYATITGLGYAFEADSFFKKCVNRLSALLYRTALAGTEGVFFQNDDDIAVF
RRAGILGARARILKARGTGVDTSRFAPAPLPGLEADGSLEGPPVFLLVARLLEAKGLEEYAQAARTLKAAHPQARFLLLG
PAEQGLGSISLETVRQWQTEGCIEYLGETRDVRPYVSAAHVMVLPSWREGTPTSIMEGMSMGRAAVVTDAPGCREVVRDG
YNGYLVPLRDPQALAAAMEKFIRQPKLMAEMGANGRRMAVDEFDAEKVAVRILEDMRVPALA

Sequences:

>Translated_382_residues
MKIIVLGNQARSMSNFWSVLIRRMHRAGHEVVCCAPPGDPGSEAALAAQGARLLHYPLDRKGLNPLRDLRTTGALLRLFK
AEKPDLLFSSTIKPVIYGCIAARVAGIPHVYATITGLGYAFEADSFFKKCVNRLSALLYRTALAGTEGVFFQNDDDIAVF
RRAGILGARARILKARGTGVDTSRFAPAPLPGLEADGSLEGPPVFLLVARLLEAKGLEEYAQAARTLKAAHPQARFLLLG
PAEQGLGSISLETVRQWQTEGCIEYLGETRDVRPYVSAAHVMVLPSWREGTPTSIMEGMSMGRAAVVTDAPGCREVVRDG
YNGYLVPLRDPQALAAAMEKFIRQPKLMAEMGANGRRMAVDEFDAEKVAVRILEDMRVPALA
>Mature_382_residues
MKIIVLGNQARSMSNFWSVLIRRMHRAGHEVVCCAPPGDPGSEAALAAQGARLLHYPLDRKGLNPLRDLRTTGALLRLFK
AEKPDLLFSSTIKPVIYGCIAARVAGIPHVYATITGLGYAFEADSFFKKCVNRLSALLYRTALAGTEGVFFQNDDDIAVF
RRAGILGARARILKARGTGVDTSRFAPAPLPGLEADGSLEGPPVFLLVARLLEAKGLEEYAQAARTLKAAHPQARFLLLG
PAEQGLGSISLETVRQWQTEGCIEYLGETRDVRPYVSAAHVMVLPSWREGTPTSIMEGMSMGRAAVVTDAPGCREVVRDG
YNGYLVPLRDPQALAAAMEKFIRQPKLMAEMGANGRRMAVDEFDAEKVAVRILEDMRVPALA

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles. Required for biofilm maintenance [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Escherichia coli, GI1788357, Length=172, Percent_Identity=33.1395348837209, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 41502; Mature: 41502

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIVLGNQARSMSNFWSVLIRRMHRAGHEVVCCAPPGDPGSEAALAAQGARLLHYPLDR
CEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHCCCEEEECCCCC
KGLNPLRDLRTTGALLRLFKAEKPDLLFSSTIKPVIYGCIAARVAGIPHVYATITGLGYA
CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCE
FEADSFFKKCVNRLSALLYRTALAGTEGVFFQNDDDIAVFRRAGILGARARILKARGTGV
ECHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHCHHHHHHHHEECCCCCC
DTSRFAPAPLPGLEADGSLEGPPVFLLVARLLEAKGLEEYAQAARTLKAAHPQARFLLLG
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEC
PAEQGLGSISLETVRQWQTEGCIEYLGETRDVRPYVSAAHVMVLPSWREGTPTSIMEGMS
CHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCEEEEEEECCCCCCHHHHHHHHH
MGRAAVVTDAPGCREVVRDGYNGYLVPLRDPQALAAAMEKFIRQPKLMAEMGANGRRMAV
CCCEEEEECCCCHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCHHHHHHCCCCCEEEH
DEFDAEKVAVRILEDMRVPALA
HHCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKIIVLGNQARSMSNFWSVLIRRMHRAGHEVVCCAPPGDPGSEAALAAQGARLLHYPLDR
CEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHCCCEEEECCCCC
KGLNPLRDLRTTGALLRLFKAEKPDLLFSSTIKPVIYGCIAARVAGIPHVYATITGLGYA
CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCE
FEADSFFKKCVNRLSALLYRTALAGTEGVFFQNDDDIAVFRRAGILGARARILKARGTGV
ECHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHCHHHHHHHHEECCCCCC
DTSRFAPAPLPGLEADGSLEGPPVFLLVARLLEAKGLEEYAQAARTLKAAHPQARFLLLG
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEC
PAEQGLGSISLETVRQWQTEGCIEYLGETRDVRPYVSAAHVMVLPSWREGTPTSIMEGMS
CHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCEEEEEEECCCCCCHHHHHHHHH
MGRAAVVTDAPGCREVVRDGYNGYLVPLRDPQALAAAMEKFIRQPKLMAEMGANGRRMAV
CCCEEEEECCCCHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCHHHHHHCCCCCEEEH
DEFDAEKVAVRILEDMRVPALA
HHCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]