| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
Click here to switch to the map view.
The map label for this gene is yceG [C]
Identifier: 220903316
GI number: 220903316
Start: 41453
End: 42502
Strand: Reverse
Name: yceG [C]
Synonym: Ddes_0030
Alternate gene names: 220903316
Gene position: 42502-41453 (Counterclockwise)
Preceding gene: 220903317
Following gene: 220903315
Centisome position: 1.48
GC content: 60.95
Gene sequence:
>1050_bases ATGAAAACACTGCTGCGCCTGCTCGGACTGCTGTTGCTGCTGGCCCTGGCCGGTGGCGGCTGGCTTGCTTACGAGGCTCA TACCTTCCTGAATACCCCGGCGCAAAGCGAGGGGCAGGATGTTTTTTTTGATGTGCCGCCCGGCGCGCGCTTTGCCCAGG TGGCGGCAGGGCTTGAGCAGAAAGGCATTATCACCGACGCCCGCAGGTTCGCCCTGCTCGCCCGCTATAAGGAATGGGAC AGCCGCCTTCAGGCCGGGCGCTTTGCCCTCAATTCCGGCTGGCTGCCCGAAAAGGTGCTGGACACGCTCGTCAACGGCCA GCCAGTGCTTTTCCGCATTACTGTCCCCGAAGGACTCACCTGGTGGCAGACCGGCAAACTGCTGGAAGAAGCCGGACTTG TGCGCTTTGACGATTTCCGTCAGGTCGTCACGGACCCGGCCTTTCTGCGCCACTATGGCATCCCCTTTGCCACGGCCGAG GGTTTTCTCATGCCGGATACCTATCTGCTGAAAAAAGCTGACGAGCCGGATATGGCTCAGGCCCGCAGCGTTGCCGGGCG TATGGTGGACAATTTTTGGCGCAAGGCTGCCCCTGTGTGGCCCGATGGCAGAAAACCCGCCGTGGACCAGCTGAAAACCT GGATGATCCTGGCCTCGGTGGTGGAAAAGGAAACAGGCATCGACGCCGAGCGCCCGCGTGTGGCCGGGGTGTATCAGAAC CGCCTGGCCCGTAACATGATCCTTCAGGCCGACCCCACGGTCATCTACGGCCTTGGTCCCGGCTTTGACGGCAATCTGCG CCGCAATCACCTGGACGATCCCAACAACCTGTACAATACCTACCAGCGGCCGGGGCTGCCGCCCGGTCCCATATGCTCGT TCGGCATGGCGGCGCTCAAGGCGGCCATCAATCCGGAAAAACATGACTTTCTCTATTTTGTGGCCGTCACTGACGGCGGT GAACATGCGTTTTCCACCAATCTTGCGGACCATAACAAGGCCGTGCGCCAGTACCTGCAAAACAGGCGCAAAGCCCAGCA GAGCCGCTAA
Upstream 100 bases:
>100_bases GGCTCAAAATGCGCAAGCGCAAGGCCGTACTTGACCAGCAGGCTGCCGTGCGCATTCTTTCGTCCTTTCTAGCCCTTGCC CCGCAAGAGCGGAGTCCCGC
Downstream 100 bases:
>100_bases GGAGGCCCCGTGAAATACCTCATCGTTGAAGATTTTTCCGGCCAGCCCGTCCCCTTTGTCTTTCCCCGCCGCGTTGACCA CAGCGACATGCGCGAACAAC
Product: aminodeoxychorismate lyase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MKTLLRLLGLLLLLALAGGGWLAYEAHTFLNTPAQSEGQDVFFDVPPGARFAQVAAGLEQKGIITDARRFALLARYKEWD SRLQAGRFALNSGWLPEKVLDTLVNGQPVLFRITVPEGLTWWQTGKLLEEAGLVRFDDFRQVVTDPAFLRHYGIPFATAE GFLMPDTYLLKKADEPDMAQARSVAGRMVDNFWRKAAPVWPDGRKPAVDQLKTWMILASVVEKETGIDAERPRVAGVYQN RLARNMILQADPTVIYGLGPGFDGNLRRNHLDDPNNLYNTYQRPGLPPGPICSFGMAALKAAINPEKHDFLYFVAVTDGG EHAFSTNLADHNKAVRQYLQNRRKAQQSR
Sequences:
>Translated_349_residues MKTLLRLLGLLLLLALAGGGWLAYEAHTFLNTPAQSEGQDVFFDVPPGARFAQVAAGLEQKGIITDARRFALLARYKEWD SRLQAGRFALNSGWLPEKVLDTLVNGQPVLFRITVPEGLTWWQTGKLLEEAGLVRFDDFRQVVTDPAFLRHYGIPFATAE GFLMPDTYLLKKADEPDMAQARSVAGRMVDNFWRKAAPVWPDGRKPAVDQLKTWMILASVVEKETGIDAERPRVAGVYQN RLARNMILQADPTVIYGLGPGFDGNLRRNHLDDPNNLYNTYQRPGLPPGPICSFGMAALKAAINPEKHDFLYFVAVTDGG EHAFSTNLADHNKAVRQYLQNRRKAQQSR >Mature_349_residues MKTLLRLLGLLLLLALAGGGWLAYEAHTFLNTPAQSEGQDVFFDVPPGARFAQVAAGLEQKGIITDARRFALLARYKEWD SRLQAGRFALNSGWLPEKVLDTLVNGQPVLFRITVPEGLTWWQTGKLLEEAGLVRFDDFRQVVTDPAFLRHYGIPFATAE GFLMPDTYLLKKADEPDMAQARSVAGRMVDNFWRKAAPVWPDGRKPAVDQLKTWMILASVVEKETGIDAERPRVAGVYQN RLARNMILQADPTVIYGLGPGFDGNLRRNHLDDPNNLYNTYQRPGLPPGPICSFGMAALKAAINPEKHDFLYFVAVTDGG EHAFSTNLADHNKAVRQYLQNRRKAQQSR
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=308, Percent_Identity=36.038961038961, Blast_Score=149, Evalue=2e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 39019; Mature: 39019
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLLRLLGLLLLLALAGGGWLAYEAHTFLNTPAQSEGQDVFFDVPPGARFAQVAAGLEQ CHHHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHCCHH KGIITDARRFALLARYKEWDSRLQAGRFALNSGWLPEKVLDTLVNGQPVLFRITVPEGLT CCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCC WWQTGKLLEEAGLVRFDDFRQVVTDPAFLRHYGIPFATAEGFLMPDTYLLKKADEPDMAQ HHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCHHHH ARSVAGRMVDNFWRKAAPVWPDGRKPAVDQLKTWMILASVVEKETGIDAERPRVAGVYQN HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH RLARNMILQADPTVIYGLGPGFDGNLRRNHLDDPNNLYNTYQRPGLPPGPICSFGMAALK HHHHHHEEECCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHH AAINPEKHDFLYFVAVTDGGEHAFSTNLADHNKAVRQYLQNRRKAQQSR HHCCCCCCCEEEEEEEECCCCCHHCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKTLLRLLGLLLLLALAGGGWLAYEAHTFLNTPAQSEGQDVFFDVPPGARFAQVAAGLEQ CHHHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHCCHH KGIITDARRFALLARYKEWDSRLQAGRFALNSGWLPEKVLDTLVNGQPVLFRITVPEGLT CCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCC WWQTGKLLEEAGLVRFDDFRQVVTDPAFLRHYGIPFATAEGFLMPDTYLLKKADEPDMAQ HHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCHHHH ARSVAGRMVDNFWRKAAPVWPDGRKPAVDQLKTWMILASVVEKETGIDAERPRVAGVYQN HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH RLARNMILQADPTVIYGLGPGFDGNLRRNHLDDPNNLYNTYQRPGLPPGPICSFGMAALK HHHHHHEEECCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHH AAINPEKHDFLYFVAVTDGGEHAFSTNLADHNKAVRQYLQNRRKAQQSR HHCCCCCCCEEEEEEEECCCCCHHCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]