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The map label for this gene is ropB [H]

Identifier: 21911280

GI number: 21911280

Start: 1763535

End: 1764377

Strand: Direct

Name: ropB [H]

Synonym: SpyM3_1744

Alternate gene names: 21911280

Gene position: 1763535-1764377 (Clockwise)

Preceding gene: 21911275

Following gene: 21911282

Centisome position: 92.79

GC content: 32.15

Gene sequence:

>843_bases
ATGGAAATTGGTGAAACCGTTGAATTCATTAGGCATTCAAAAAACATTTCGATTAAACAAGTTTGTGGTGATTATCTCAC
TAGGCAAACCTATTATCGTTTTATTAAAAATAATCTTGACATTTCTTCGAAAAAGTTACTTTATATCTTAGACAACTTGA
ATGTCAATGTTGATGAGTTTCTCTTTATTAGTAATAACTTTAAACAATACAAAGAATTTATTGATATGGATACGGCAAAA
CATTATTTTGAATGCCGAAACATAGAAGGTTTAAATCATATCCTTGATTCTTATAAAGATAGTAAGCCAACAAAGGAAAA
GAACCTTTTTGCCTTGGTCAAGGTGTTATTAGCAACTCTTACTGAGGAAGACTGTCTGACAGAGCGGACTTATTTGTCAA
ACTATCTTATTAATATTGAAACTTGGAGTCACTATGAGACTGTGCTTTTTAATAATTGTATGTTCATTTTTGAGTCTTGC
TTTATTGAGATGGTGTTTTCAAAAGTTATTTTGAACCTCGATAAATACAATACCCTAAGGTATTATGGGAATGAATCGAT
TCGGATGTTTGTCAATATGTTGATTTTGTTTATTCAGCGACAAGAGTATGATAAAGCTTCTGAGATTTTGGCAAAAATTG
AAGATTATCAGCTAAATGATGATTGCTTATATGAACGGTGTTGTGTGTCTTTTTTTGATGGCATTATTGGCCTCATAAAT
GGTAAAGAGGGGGCTGAGCAAAAGTGTGTGCAGATCTTGGAGATCTTCCAATTACTTAATTGCAAAACGATCCATCATAT
GTTTCAAACCTACCTAGAAGCCATTAAACATAAACTGTCCTGA

Upstream 100 bases:

>100_bases
ATGTACCCATCATAACCGACTATCATCCGAAACATTCAACTTGTTACGTATTAGGTACATGCGTAACGTATTTTTGACAT
CAACTAGGAAGGCTTGACAT

Downstream 100 bases:

>100_bases
GGCTCTTTAAAAAGCTAACGCTCTTATGGTGTTAGCTTTTTGATTTGGTATCTTAATAAATGGTGTAGTTTATCTCAACA
GCTCCAGGGCGATTTTTTCA

Product: putative transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MEIGETVEFIRHSKNISIKQVCGDYLTRQTYYRFIKNNLDISSKKLLYILDNLNVNVDEFLFISNNFKQYKEFIDMDTAK
HYFECRNIEGLNHILDSYKDSKPTKEKNLFALVKVLLATLTEEDCLTERTYLSNYLINIETWSHYETVLFNNCMFIFESC
FIEMVFSKVILNLDKYNTLRYYGNESIRMFVNMLILFIQRQEYDKASEILAKIEDYQLNDDCLYERCCVSFFDGIIGLIN
GKEGAEQKCVQILEIFQLLNCKTIHHMFQTYLEAIKHKLS

Sequences:

>Translated_280_residues
MEIGETVEFIRHSKNISIKQVCGDYLTRQTYYRFIKNNLDISSKKLLYILDNLNVNVDEFLFISNNFKQYKEFIDMDTAK
HYFECRNIEGLNHILDSYKDSKPTKEKNLFALVKVLLATLTEEDCLTERTYLSNYLINIETWSHYETVLFNNCMFIFESC
FIEMVFSKVILNLDKYNTLRYYGNESIRMFVNMLILFIQRQEYDKASEILAKIEDYQLNDDCLYERCCVSFFDGIIGLIN
GKEGAEQKCVQILEIFQLLNCKTIHHMFQTYLEAIKHKLS
>Mature_280_residues
MEIGETVEFIRHSKNISIKQVCGDYLTRQTYYRFIKNNLDISSKKLLYILDNLNVNVDEFLFISNNFKQYKEFIDMDTAK
HYFECRNIEGLNHILDSYKDSKPTKEKNLFALVKVLLATLTEEDCLTERTYLSNYLINIETWSHYETVLFNNCMFIFESC
FIEMVFSKVILNLDKYNTLRYYGNESIRMFVNMLILFIQRQEYDKASEILAKIEDYQLNDDCLYERCCVSFFDGIIGLIN
GKEGAEQKCVQILEIFQLLNCKTIHHMFQTYLEAIKHKLS

Specific function: Regulates the expression of glucosyltransferase (gtfG) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982
- InterPro:   IPR010057 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 33279; Mature: 33279

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIGETVEFIRHSKNISIKQVCGDYLTRQTYYRFIKNNLDISSKKLLYILDNLNVNVDEF
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHE
LFISNNFKQYKEFIDMDTAKHYFECRNIEGLNHILDSYKDSKPTKEKNLFALVKVLLATL
EEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
TEEDCLTERTYLSNYLINIETWSHYETVLFNNCMFIFESCFIEMVFSKVILNLDKYNTLR
CHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
YYGNESIRMFVNMLILFIQRQEYDKASEILAKIEDYQLNDDCLYERCCVSFFDGIIGLIN
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC
GKEGAEQKCVQILEIFQLLNCKTIHHMFQTYLEAIKHKLS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEIGETVEFIRHSKNISIKQVCGDYLTRQTYYRFIKNNLDISSKKLLYILDNLNVNVDEF
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHE
LFISNNFKQYKEFIDMDTAKHYFECRNIEGLNHILDSYKDSKPTKEKNLFALVKVLLATL
EEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
TEEDCLTERTYLSNYLINIETWSHYETVLFNNCMFIFESCFIEMVFSKVILNLDKYNTLR
CHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
YYGNESIRMFVNMLILFIQRQEYDKASEILAKIEDYQLNDDCLYERCCVSFFDGIIGLIN
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC
GKEGAEQKCVQILEIFQLLNCKTIHHMFQTYLEAIKHKLS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1534326 [H]