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The map label for this gene is dppB [H]

Identifier: 21911255

GI number: 21911255

Start: 1735099

End: 1735962

Strand: Direct

Name: dppB [H]

Synonym: SpyM3_1719

Alternate gene names: 21911255

Gene position: 1735099-1735962 (Clockwise)

Preceding gene: 21911254

Following gene: 21911256

Centisome position: 91.3

GC content: 40.28

Gene sequence:

>864_bases
ATGGCAAGTGTCAATTATGACACATCACTAACCCCGGCTCAGTACAAAGCGATTGCTCACCACTATGGCTTGGATAAGCC
AGCTCTAGTCCAATATTTTATTTGGTTGAAAAATGTGATACAGGGACATTTAGGGACCTCGCTCGTTTATCGGCAACCTG
TTAGTGATATTATTAGATCACGGGCAGGTGCTTCTTTCATACTTATGGGACTCTCTTGGATCTTATCGGGTCTTATTGGA
TTTATCTTAGGAACGTTATCCGCTTTCCATCAAGGGAAATTACTTGATCGAGTTATCAGGTGGTTTTCATACCTTCAGAT
ATCAGTACCAACGTTTTGGATTGGACTCATTTTTTTATTAATCTTTTCTGTCCAGCTGGGGTGGTTCCCGATTGGTATTT
CTTCCCCGATTGGGACTTTAAGTCAAGATATTACGTTAGCTGATCGGATTAAGCACCTTATGTTACCTGTTTTCACGCTA
AGTATTCTAGGCATTGCCAATGTCACTCTTCATACGAGAACTAAAATGATATCGGTGCTTTCTAGTGAATATGTCTTATT
TGCCAGAGCGCGTGGGGAAACACAGTGGCAAATTTTTAAACATCATTGCCTTAGAAATGCTATCGTACCAGCTATTACAC
TGCATTTTTCCTATTTTGGAGAATTGTTTGGAGGATCTGTTCTTGCTGAGCAAGTTTTCTCATATCCTGGCTTAGGGTCT
ACCCTCACTGAAGCAGGACTTAAAAGTGATACACCGCTACTTCTAGCTATCGTGATGATAGGGACATTATTTGTTTTTGC
GGGCAATCTTATTGCGGACATTTTAAATAGCATCATCAATCCACAGTTAAGGAGAAAAGTATGA

Upstream 100 bases:

>100_bases
CATTATTATCATCTGGAAAATCATCAGATGTGTCACGCTTATTTTTGGGGTATCTGTTTTGACCTTCGTTTTGTTAAAAC
AATCTCCAGTAGATCCCGTC

Downstream 100 bases:

>100_bases
TATTGAAACGTCGAACGATGGTTTTATGGCAACTAGGTATCGCCATTTCTCTCATTCTTAGTATTCTAGCCTTAAACCTT
TATTTCTATAGGACGCCTTT

Product: putative dipeptide ABC transporter permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MASVNYDTSLTPAQYKAIAHHYGLDKPALVQYFIWLKNVIQGHLGTSLVYRQPVSDIIRSRAGASFILMGLSWILSGLIG
FILGTLSAFHQGKLLDRVIRWFSYLQISVPTFWIGLIFLLIFSVQLGWFPIGISSPIGTLSQDITLADRIKHLMLPVFTL
SILGIANVTLHTRTKMISVLSSEYVLFARARGETQWQIFKHHCLRNAIVPAITLHFSYFGELFGGSVLAEQVFSYPGLGS
TLTEAGLKSDTPLLLAIVMIGTLFVFAGNLIADILNSIINPQLRRKV

Sequences:

>Translated_287_residues
MASVNYDTSLTPAQYKAIAHHYGLDKPALVQYFIWLKNVIQGHLGTSLVYRQPVSDIIRSRAGASFILMGLSWILSGLIG
FILGTLSAFHQGKLLDRVIRWFSYLQISVPTFWIGLIFLLIFSVQLGWFPIGISSPIGTLSQDITLADRIKHLMLPVFTL
SILGIANVTLHTRTKMISVLSSEYVLFARARGETQWQIFKHHCLRNAIVPAITLHFSYFGELFGGSVLAEQVFSYPGLGS
TLTEAGLKSDTPLLLAIVMIGTLFVFAGNLIADILNSIINPQLRRKV
>Mature_286_residues
ASVNYDTSLTPAQYKAIAHHYGLDKPALVQYFIWLKNVIQGHLGTSLVYRQPVSDIIRSRAGASFILMGLSWILSGLIGF
ILGTLSAFHQGKLLDRVIRWFSYLQISVPTFWIGLIFLLIFSVQLGWFPIGISSPIGTLSQDITLADRIKHLMLPVFTLS
ILGIANVTLHTRTKMISVLSSEYVLFARARGETQWQIFKHHCLRNAIVPAITLHFSYFGELFGGSVLAEQVFSYPGLGST
LTEAGLKSDTPLLLAIVMIGTLFVFAGNLIADILNSIINPQLRRKV

Specific function: This protein is a component of an oligopeptide permease, a binding protein-dependent transport system. This APP system can completely substitute for the OPP system in both sporulation and genetic competence, though, unlike OPP, is incapable of transportin

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787053, Length=269, Percent_Identity=33.457249070632, Blast_Score=153, Evalue=1e-38,
Organism=Escherichia coli, GI1789965, Length=298, Percent_Identity=28.5234899328859, Blast_Score=143, Evalue=1e-35,
Organism=Escherichia coli, GI1789888, Length=276, Percent_Identity=30.0724637681159, Blast_Score=142, Evalue=3e-35,
Organism=Escherichia coli, GI1787497, Length=280, Percent_Identity=27.5, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1787761, Length=266, Percent_Identity=30.8270676691729, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1787550, Length=268, Percent_Identity=28.3582089552239, Blast_Score=110, Evalue=8e-26,
Organism=Escherichia coli, GI1788504, Length=279, Percent_Identity=27.9569892473118, Blast_Score=102, Evalue=4e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31849; Mature: 31718

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASVNYDTSLTPAQYKAIAHHYGLDKPALVQYFIWLKNVIQGHLGTSLVYRQPVSDIIRS
CCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHH
RAGASFILMGLSWILSGLIGFILGTLSAFHQGKLLDRVIRWFSYLQISVPTFWIGLIFLL
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFSVQLGWFPIGISSPIGTLSQDITLADRIKHLMLPVFTLSILGIANVTLHTRTKMISVL
HHHHHHCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSEYVLFARARGETQWQIFKHHCLRNAIVPAITLHFSYFGELFGGSVLAEQVFSYPGLGS
HCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCH
TLTEAGLKSDTPLLLAIVMIGTLFVFAGNLIADILNSIINPQLRRKV
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCC
>Mature Secondary Structure 
ASVNYDTSLTPAQYKAIAHHYGLDKPALVQYFIWLKNVIQGHLGTSLVYRQPVSDIIRS
CCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHH
RAGASFILMGLSWILSGLIGFILGTLSAFHQGKLLDRVIRWFSYLQISVPTFWIGLIFLL
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFSVQLGWFPIGISSPIGTLSQDITLADRIKHLMLPVFTLSILGIANVTLHTRTKMISVL
HHHHHHCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSEYVLFARARGETQWQIFKHHCLRNAIVPAITLHFSYFGELFGGSVLAEQVFSYPGLGS
HCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCH
TLTEAGLKSDTPLLLAIVMIGTLFVFAGNLIADILNSIINPQLRRKV
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7997159; 9384377 [H]