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The map label for this gene is yhfR [C]

Identifier: 21911150

GI number: 21911150

Start: 1615701

End: 1616459

Strand: Direct

Name: yhfR [C]

Synonym: SpyM3_1614

Alternate gene names: 21911150

Gene position: 1615701-1616459 (Clockwise)

Preceding gene: 21911146

Following gene: 21911151

Centisome position: 85.01

GC content: 36.36

Gene sequence:

>759_bases
ATGTCTACTAACGACTTAACCAAAAAACTCAAAAAACTTAAACATGTGCAAGTATATAATACTATTTTTCAACTTATTCA
AGATGGTACATATAGTCCTGGCATGCAACTGCCATCAGAACCTGAACTTGCTAGACAGCTCAATGTCAGTCGGATGACAC
TGCGTAAATCCCTAGCCCTCCTCCAAGAGGATCATCTCATAAAAAATATCAGAGGAAAGGGAAATTTTATACTCAAGACT
CCTGAAACTAAATATCACCAAGGTTTCGAATATCTTCAACACCCCATATATGCAAGCCTATCATCTGACATCACAAAGGT
TGAATTGGAATATCGGATTGAAGTGCCCACTGTTGCCATTACAGCATCCCTAAAACAAGAAACTCCTGTTGTGATTATTG
TTGATCGCTGGTATCATAGCCAAAATAAAGCTATTGCTTATAGTTTATCTTTTATCCCTATTGAGGTTATTTCCAAATAT
GCTATAAATCTCAATCAAGAAGAGCCCCTTCTTACTTTCTTAGAAGAGAAAATCTATGAATCTGGTAAAGCTTCTCATTC
CTGCAACCAAATCGGCTATACCAAGACTGGCAATTACACAGCAACTAAGTATACTCTATCAGAAAATAGTGCTTTTATTT
TAATCCAAGAAACTCTCTACAATGGTAAAGACATCTTGGTCTCAACCAAACACTACGTTCCTGCTGATTTATTTGACTTA
AAAGTTCAATCTCAAAGTTGCCAAAGCGACACTCATTAA

Upstream 100 bases:

>100_bases
CTATAGATGGGTACAATTCTAATCAAGGAATACTGTTAGTGCTAAAATAGTTTTTAGACAAGTTAAACTCCACTAAAGAT
TATTAAATGAGGTAAGTGAT

Downstream 100 bases:

>100_bases
ACACCTTTAAACAGTTATTAATACCTGACTCCCACACTTAGATGGGGAGTTTTTTGATATTATGGCTAAAAAAGATAACT
AGTTAATTTTTTTATTTGCT

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; Transcriptional Regulatory Protein; GntR Family Transcriptional Regulator; Transcription Regulator; Regulatory Protein GntR HTH

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MSTNDLTKKLKKLKHVQVYNTIFQLIQDGTYSPGMQLPSEPELARQLNVSRMTLRKSLALLQEDHLIKNIRGKGNFILKT
PETKYHQGFEYLQHPIYASLSSDITKVELEYRIEVPTVAITASLKQETPVVIIVDRWYHSQNKAIAYSLSFIPIEVISKY
AINLNQEEPLLTFLEEKIYESGKASHSCNQIGYTKTGNYTATKYTLSENSAFILIQETLYNGKDILVSTKHYVPADLFDL
KVQSQSCQSDTH

Sequences:

>Translated_252_residues
MSTNDLTKKLKKLKHVQVYNTIFQLIQDGTYSPGMQLPSEPELARQLNVSRMTLRKSLALLQEDHLIKNIRGKGNFILKT
PETKYHQGFEYLQHPIYASLSSDITKVELEYRIEVPTVAITASLKQETPVVIIVDRWYHSQNKAIAYSLSFIPIEVISKY
AINLNQEEPLLTFLEEKIYESGKASHSCNQIGYTKTGNYTATKYTLSENSAFILIQETLYNGKDILVSTKHYVPADLFDL
KVQSQSCQSDTH
>Mature_251_residues
STNDLTKKLKKLKHVQVYNTIFQLIQDGTYSPGMQLPSEPELARQLNVSRMTLRKSLALLQEDHLIKNIRGKGNFILKTP
ETKYHQGFEYLQHPIYASLSSDITKVELEYRIEVPTVAITASLKQETPVVIIVDRWYHSQNKAIAYSLSFIPIEVISKYA
INLNQEEPLLTFLEEKIYESGKASHSCNQIGYTKTGNYTATKYTLSENSAFILIQETLYNGKDILVSTKHYVPADLFDLK
VQSQSCQSDTH

Specific function: Unknown

COG id: COG2188

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28767; Mature: 28636

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTNDLTKKLKKLKHVQVYNTIFQLIQDGTYSPGMQLPSEPELARQLNVSRMTLRKSLAL
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHH
LQEDHLIKNIRGKGNFILKTPETKYHQGFEYLQHPIYASLSSDITKVELEYRIEVPTVAI
HHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCHHHHHHCCCCEEEEEEEEEECCEEEE
TASLKQETPVVIIVDRWYHSQNKAIAYSLSFIPIEVISKYAINLNQEEPLLTFLEEKIYE
EEECCCCCCEEEEEECEECCCCCEEEEEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHH
SGKASHSCNQIGYTKTGNYTATKYTLSENSAFILIQETLYNGKDILVSTKHYVPADLFDL
CCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEHHHCCCCEEEEECCCCCCCCCEEE
KVQSQSCQSDTH
EECCCCCCCCCC
>Mature Secondary Structure 
STNDLTKKLKKLKHVQVYNTIFQLIQDGTYSPGMQLPSEPELARQLNVSRMTLRKSLAL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHH
LQEDHLIKNIRGKGNFILKTPETKYHQGFEYLQHPIYASLSSDITKVELEYRIEVPTVAI
HHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCHHHHHHCCCCEEEEEEEEEECCEEEE
TASLKQETPVVIIVDRWYHSQNKAIAYSLSFIPIEVISKYAINLNQEEPLLTFLEEKIYE
EEECCCCCCEEEEEECEECCCCCEEEEEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHH
SGKASHSCNQIGYTKTGNYTATKYTLSENSAFILIQETLYNGKDILVSTKHYVPADLFDL
CCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEHHHCCCCEEEEECCCCCCCCCEEE
KVQSQSCQSDTH
EECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA