Click here to switch to the map view.

The map label for this gene is 21910991

Identifier: 21910991

GI number: 21910991

Start: 1447861

End: 1448235

Strand: Direct

Name: 21910991

Synonym: SpyM3_1455

Alternate gene names: NA

Gene position: 1447861-1448235 (Clockwise)

Preceding gene: 21910945

Following gene: 21910992

Centisome position: 76.18

GC content: 38.93

Gene sequence:

>375_bases
ATGCTCGGAAAGGTTGATATATCAATGTTTTCAACATTCGAAAAAATAAAGGAACTGGCAAAGAAACAAGGTAAATCGCT
CGGACAGGTAGAAGAGGACTTAAACTACGGCAGAAATACGCTGTATAAAATAAAGAACTCAACTCCGAACGCAGAGAGGC
TAGGAGAAATAGCTAACTACTTTAATGTTTCTACCGACTATTTACTTGGCAGGACAGATAATCCTAAGATTGCGCAAGAT
GGGCACACTTCGGTCGCAATTGATCTAAAAAAAGATGCAGAAGAAACTTTCTTCTTCGACGGACACGAACTCAACGACGA
GGATATAGACCTTATCACATCTATATTGGAAACGCGCATCAAAAATAGAAAATAG

Upstream 100 bases:

>100_bases
TTAACTTCGTTTTTTACTAACTATCTTACAAAAACTATTTTACACCAAATTTGGTAAAAGTCAATAATTTTACACCAAAT
TTTCTAAAATATTTTTTGTC

Downstream 100 bases:

>100_bases
AGAGGACAGCTCTATGATGACACCAGAAACAGTCTGTCAGGAAAAAGGCATCGATTTAGTGTATTTTGATGGTAGGGGTA
CAAACACCCCTGGAATGTTT

Product: putative repressor - phage associated

Products: NA

Alternate protein names: Phage Transcriptional Regulator; Transcriptional Regulator; Cro/CI Family Phage Transcriptional Regulator; Cro/CI Family Transcriptional Regulator; Repressor; XRE Family Transcriptional Regulator; Phage Transcriptional Regulator Cro/CI Family; Xin-Antitoxin System Antitoxin Component Xre Family; Rep Protein; Phage Associated Repressor; Prophage Ps1 Protein; Phage Repressor; Helix-Turn-Helix Domain Protein

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MLGKVDISMFSTFEKIKELAKKQGKSLGQVEEDLNYGRNTLYKIKNSTPNAERLGEIANYFNVSTDYLLGRTDNPKIAQD
GHTSVAIDLKKDAEETFFFDGHELNDEDIDLITSILETRIKNRK

Sequences:

>Translated_124_residues
MLGKVDISMFSTFEKIKELAKKQGKSLGQVEEDLNYGRNTLYKIKNSTPNAERLGEIANYFNVSTDYLLGRTDNPKIAQD
GHTSVAIDLKKDAEETFFFDGHELNDEDIDLITSILETRIKNRK
>Mature_124_residues
MLGKVDISMFSTFEKIKELAKKQGKSLGQVEEDLNYGRNTLYKIKNSTPNAERLGEIANYFNVSTDYLLGRTDNPKIAQD
GHTSVAIDLKKDAEETFFFDGHELNDEDIDLITSILETRIKNRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14118; Mature: 14118

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGKVDISMFSTFEKIKELAKKQGKSLGQVEEDLNYGRNTLYKIKNSTPNAERLGEIANY
CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHEEEECCCCCCHHHHHHHHHH
FNVSTDYLLGRTDNPKIAQDGHTSVAIDLKKDAEETFFFDGHELNDEDIDLITSILETRI
HCCCCCEEECCCCCCCCCCCCCCEEEEEECCCCCCCEEECCCCCCCHHHHHHHHHHHHHH
KNRK
CCCC
>Mature Secondary Structure
MLGKVDISMFSTFEKIKELAKKQGKSLGQVEEDLNYGRNTLYKIKNSTPNAERLGEIANY
CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHEEEECCCCCCHHHHHHHHHH
FNVSTDYLLGRTDNPKIAQDGHTSVAIDLKKDAEETFFFDGHELNDEDIDLITSILETRI
HCCCCCEEECCCCCCCCCCCCCCEEEEEECCCCCCCEEECCCCCCCHHHHHHHHHHHHHH
KNRK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA