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The map label for this gene is sepF [H]

Identifier: 21910706

GI number: 21910706

Start: 1196373

End: 1197029

Strand: Reverse

Name: sepF [H]

Synonym: SpyM3_1170

Alternate gene names: 21910706

Gene position: 1197029-1196373 (Counterclockwise)

Preceding gene: 21910707

Following gene: 21910705

Centisome position: 62.98

GC content: 37.75

Gene sequence:

>657_bases
ATGGCTTTTAAAGATACATTTAACAAGATGATTTCTTATTTTGACACGGATGAGGTTAACGAAGTTGAAGAAGATGTTGC
AGCATCAACTGATAACGTTATTCCAAGATCACAACAATCAGTCAGAGCAAGTAGTCATCCAAAACAAGAACCTAGAAACA
ATCACGTACAACAAGATCATCAAGCGAGATCCCAAGAACAGACAAGGTCACAAATGCATCCAAAACATGGTACTTCTGAA
CGCTATTATCAGCAGTCTCAGCCAAAAGAAGGCCATGAAATGGTTGACAGAAGAAAACGGATGAGCACTTCTGGTATTGC
AAATCGCCGTGAGCAGTATCAACAATCAACTTGTTCAGATCAAACAACTATTGCCTTAAAGTATCCTCGTAAATATGAGG
ATGCTCAAGAAATTGTGGATCTTTTAATAGTTAATGAATGCGTTTTGATTGATTTTCAGTTTATGCTAGATGCTCAGGCT
AGACGGTGTTTAGATTTTATTGATGGTGCTAGTAAAGTGCTCTATGGTAGCTTACAAAAGGTCGGCTCTTCAATGTACTT
ACTGGCTCCGTCAAATGTATCCGTCAATATAGAAGAAATGACTATCCCACATACTACACAAGATATTGGCTTTGATTTTG
ATATGAAAAGGCGGTAA

Upstream 100 bases:

>100_bases
AATTGAGCATGGGCATGAGTAACGATTATCCAATTGCTATTCAAGAAGGCTCAACTTTTATTCGGATTGGTAGAGCTTTC
TTTCACTAATGGAGAATAAG

Downstream 100 bases:

>100_bases
ATAAATGATATTAATACTATCTATTCTTCTTCGTCTGATCAAAGTTTACACTTATTTATTGATTGCTTACGCACTAATGT
CATGGTTTCCTGGGGCATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MAFKDTFNKMISYFDTDEVNEVEEDVAASTDNVIPRSQQSVRASSHPKQEPRNNHVQQDHQARSQEQTRSQMHPKHGTSE
RYYQQSQPKEGHEMVDRRKRMSTSGIANRREQYQQSTCSDQTTIALKYPRKYEDAQEIVDLLIVNECVLIDFQFMLDAQA
RRCLDFIDGASKVLYGSLQKVGSSMYLLAPSNVSVNIEEMTIPHTTQDIGFDFDMKRR

Sequences:

>Translated_218_residues
MAFKDTFNKMISYFDTDEVNEVEEDVAASTDNVIPRSQQSVRASSHPKQEPRNNHVQQDHQARSQEQTRSQMHPKHGTSE
RYYQQSQPKEGHEMVDRRKRMSTSGIANRREQYQQSTCSDQTTIALKYPRKYEDAQEIVDLLIVNECVLIDFQFMLDAQA
RRCLDFIDGASKVLYGSLQKVGSSMYLLAPSNVSVNIEEMTIPHTTQDIGFDFDMKRR
>Mature_217_residues
AFKDTFNKMISYFDTDEVNEVEEDVAASTDNVIPRSQQSVRASSHPKQEPRNNHVQQDHQARSQEQTRSQMHPKHGTSER
YYQQSQPKEGHEMVDRRKRMSTSGIANRREQYQQSTCSDQTTIALKYPRKYEDAQEIVDLLIVNECVLIDFQFMLDAQAR
RCLDFIDGASKVLYGSLQKVGSSMYLLAPSNVSVNIEEMTIPHTTQDIGFDFDMKRR

Specific function: Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of ftsZ protofilaments. Its function overlaps with ftsA [H]

COG id: COG1799

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm. Note=Localizes to the division site, in a ftsZ-dependent manner (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sepF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023052
- InterPro:   IPR007561 [H]

Pfam domain/function: PF04472 DUF552 [H]

EC number: NA

Molecular weight: Translated: 25219; Mature: 25088

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFKDTFNKMISYFDTDEVNEVEEDVAASTDNVIPRSQQSVRASSHPKQEPRNNHVQQDH
CCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHH
QARSQEQTRSQMHPKHGTSERYYQQSQPKEGHEMVDRRKRMSTSGIANRREQYQQSTCSD
HHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QTTIALKYPRKYEDAQEIVDLLIVNECVLIDFQFMLDAQARRCLDFIDGASKVLYGSLQK
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
VGSSMYLLAPSNVSVNIEEMTIPHTTQDIGFDFDMKRR
HCCCEEEEECCCCEEEEEEEECCCCHHHCCCCCCCCCC
>Mature Secondary Structure 
AFKDTFNKMISYFDTDEVNEVEEDVAASTDNVIPRSQQSVRASSHPKQEPRNNHVQQDH
CHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHH
QARSQEQTRSQMHPKHGTSERYYQQSQPKEGHEMVDRRKRMSTSGIANRREQYQQSTCSD
HHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QTTIALKYPRKYEDAQEIVDLLIVNECVLIDFQFMLDAQARRCLDFIDGASKVLYGSLQK
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
VGSSMYLLAPSNVSVNIEEMTIPHTTQDIGFDFDMKRR
HCCCEEEEECCCCEEEEEEEECCCCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11296296 [H]