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The map label for this gene is ypmR [H]

Identifier: 21910684

GI number: 21910684

Start: 1172895

End: 1173737

Strand: Reverse

Name: ypmR [H]

Synonym: SpyM3_1148

Alternate gene names: 21910684

Gene position: 1173737-1172895 (Counterclockwise)

Preceding gene: 21910685

Following gene: 21910683

Centisome position: 61.76

GC content: 32.62

Gene sequence:

>843_bases
ATGAATAATCGTCATTTATTTAGTGGGATATTTTTCTTTGTTATTAGTTTATGTCTGGCCTTTTTATTGCTAAATATTAT
TATCCCTAAGTCAAATTCACGTTTGAAAAAGAGTGATTTTCTGAAAAAAGAACAAGTAGCTATCCAATATGTTGCTATAG
GAGATTCATTGACAGAAGGAGTAGGTGATCTAACTCATCAAGGTGGTTTTGTTCCTTTGTTAACGAATGATCTCAGTGAA
TATTTTAAGGCTAATGTTAATCATCAAAATTACGGCGTATCTGGTGATACCAGTCAACAAATTCTTGATAGGATGATAAA
ACAAAAGCAGATACAGTTATCTTTAAAAAAAGCAGATATAATGACGTTAACCGTTGGTGGTAATGATGTTATGGCAGTTA
TTCGGAAGAATTTAGCGGATTTGCAAGTTTCTAGTTTTAGAAAGCCAGCTCGTCAGTATCAAAAACGATTAAGACAGATT
ATCGAGTTAGCCAGAAAAGATAATAAAGATCTTCCTATTTTTATTTTAGGCATCTATAATCCGTTTTATTTGAATTTTCC
AGAACTAACTGATATGCAAAAAGTGATTGATGACTGGAATACCAAAACTAAGGAGGTTGTTGGAGAATACGATCGTGTGT
ACTTTGTGCCAATAAATGACCTCTTGTATAAAGGGATAAATGGACAAGAAGGAATTGTCCATTCTTCAGGAGATCAAACT
ACAATTGTCAATGATGCCTTGTTTACTGGGGACCATTTTCACCCAAATAATACTGGCTATCAAATCATGTCAAATGCAGT
AATGGAGAAAATAAAAAAGCATGAAAAAAAAATCAAACCTTAA

Upstream 100 bases:

>100_bases
AGAATCGCAGCTTATTACAACCACTCTATTTCGGTTTTAGAAACAGGCTCTATCATCCAAACACATACAGGAGAAGGAGC
TTTTGCGGTTATGGTTCGTT

Downstream 100 bases:

>100_bases
TTGGTGGAAGTGGAGCTTCTTATGTCTGCTTGCTTTTAATACTGCCTTTTTGATGGTTATTGCAAGTCGTCTCATTCAAG
TAAGAGAACCTGAGTCAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MNNRHLFSGIFFFVISLCLAFLLLNIIIPKSNSRLKKSDFLKKEQVAIQYVAIGDSLTEGVGDLTHQGGFVPLLTNDLSE
YFKANVNHQNYGVSGDTSQQILDRMIKQKQIQLSLKKADIMTLTVGGNDVMAVIRKNLADLQVSSFRKPARQYQKRLRQI
IELARKDNKDLPIFILGIYNPFYLNFPELTDMQKVIDDWNTKTKEVVGEYDRVYFVPINDLLYKGINGQEGIVHSSGDQT
TIVNDALFTGDHFHPNNTGYQIMSNAVMEKIKKHEKKIKP

Sequences:

>Translated_280_residues
MNNRHLFSGIFFFVISLCLAFLLLNIIIPKSNSRLKKSDFLKKEQVAIQYVAIGDSLTEGVGDLTHQGGFVPLLTNDLSE
YFKANVNHQNYGVSGDTSQQILDRMIKQKQIQLSLKKADIMTLTVGGNDVMAVIRKNLADLQVSSFRKPARQYQKRLRQI
IELARKDNKDLPIFILGIYNPFYLNFPELTDMQKVIDDWNTKTKEVVGEYDRVYFVPINDLLYKGINGQEGIVHSSGDQT
TIVNDALFTGDHFHPNNTGYQIMSNAVMEKIKKHEKKIKP
>Mature_280_residues
MNNRHLFSGIFFFVISLCLAFLLLNIIIPKSNSRLKKSDFLKKEQVAIQYVAIGDSLTEGVGDLTHQGGFVPLLTNDLSE
YFKANVNHQNYGVSGDTSQQILDRMIKQKQIQLSLKKADIMTLTVGGNDVMAVIRKNLADLQVSSFRKPARQYQKRLRQI
IELARKDNKDLPIFILGIYNPFYLNFPELTDMQKVIDDWNTKTKEVVGEYDRVYFVPINDLLYKGINGQEGIVHSSGDQT
TIVNDALFTGDHFHPNNTGYQIMSNAVMEKIKKHEKKIKP

Specific function: Unknown

COG id: COG2755

COG function: function code E; Lysophospholipase L1 and related esterases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013830
- InterPro:   IPR013831
- InterPro:   IPR001087 [H]

Pfam domain/function: PF00657 Lipase_GDSL [H]

EC number: NA

Molecular weight: Translated: 31914; Mature: 31914

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNRHLFSGIFFFVISLCLAFLLLNIIIPKSNSRLKKSDFLKKEQVAIQYVAIGDSLTEG
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEEEEEEECCHHHHH
VGDLTHQGGFVPLLTNDLSEYFKANVNHQNYGVSGDTSQQILDRMIKQKQIQLSLKKADI
HHHHHHCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEECEE
MTLTVGGNDVMAVIRKNLADLQVSSFRKPARQYQKRLRQIIELARKDNKDLPIFILGIYN
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC
PFYLNFPELTDMQKVIDDWNTKTKEVVGEYDRVYFVPINDLLYKGINGQEGIVHSSGDQT
CEEECCCCHHHHHHHHHHCCCHHHHHHCCCCCEEEEEHHHHHHCCCCCCCCCEECCCCCE
TIVNDALFTGDHFHPNNTGYQIMSNAVMEKIKKHEKKIKP
EEECCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNNRHLFSGIFFFVISLCLAFLLLNIIIPKSNSRLKKSDFLKKEQVAIQYVAIGDSLTEG
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEEEEEEECCHHHHH
VGDLTHQGGFVPLLTNDLSEYFKANVNHQNYGVSGDTSQQILDRMIKQKQIQLSLKKADI
HHHHHHCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEECEE
MTLTVGGNDVMAVIRKNLADLQVSSFRKPARQYQKRLRQIIELARKDNKDLPIFILGIYN
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC
PFYLNFPELTDMQKVIDDWNTKTKEVVGEYDRVYFVPINDLLYKGINGQEGIVHSSGDQT
CEEECCCCHHHHHHHHHHCCCHHHHHHCCCCCEEEEEHHHHHHCCCCCCCCCEECCCCCE
TIVNDALFTGDHFHPNNTGYQIMSNAVMEKIKKHEKKIKP
EEECCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 3145906 [H]