Click here to switch to the map view.

The map label for this gene is pblB

Identifier: 21910638

GI number: 21910638

Start: 1144785

End: 1146758

Strand: Reverse

Name: pblB

Synonym: SpyM3_1102

Alternate gene names: NA

Gene position: 1146758-1144785 (Counterclockwise)

Preceding gene: 21910639

Following gene: 21910637

Centisome position: 60.34

GC content: 40.02

Gene sequence:

>1974_bases
GTGGAGGTACAAGGTTTGATATCGATTAAAGATGATAATACACCTCTTGTAGCAGCCTTTGAAGATGAGATTACACAGGA
AGCGAATAGCGATTATAAATTAAGTTTTAAGTATCCAGCTAAACATGAGTATCGCCCCTTGATCAAAAAAGGAATAATCC
TAGAAGCTGATGACCTACATGGAACTCAGCTTTTTAGGGTTTTTGAGATTACTAAGCGACATGGCTATATCAATGTTTAT
GGTAATCAGGTCGCCGATGATTTAAATGGCTATGCAATTGACTCTATCAGTGTTGATAGGGTGCAAGGTATGACAGTAAT
GTCAGAGTTAGCAGGTAATATCAAGCGTGAGCATCCTTTTAGCTTTTTTAGTGATATTGACGGTCGTCACACATTTAATC
AATCAGACGTATCTGTTATGGACGCTTTAGCTAATGGCAAGCACTCAATCATGGGGCAGTGGGGTGGCGAGCTTGTACGT
GATAAGTATCAGGTTAATTTGCTCAAAAAAGCTGGTAAAGACACTGAGACCTTATTTATGTATAAGAAAAACCTCAAATC
TTATGAGGAGACAGATACTATAAAAGGTCTCATCTCGATACTGCATCTCGTTGCAGAAGTTGAGGAGCAGCGGGAAGAGG
AATCTAGAGAAGTTTCTGATGCAGACATTGGCCACAATGAAGTTAGCAAAAAGAAAACGATTAGGGTAACTGTTGAGAGC
AAGCTCAAAGACACTCATCCGATAATTGTTGAAAAGACTATCAAGGTGCAGGATCAAGATGTCAAAACAGAAGAGGACTT
GCTTGCATATGGTAAGAAATACTTTGAAAAAACTCTTTGCGACATACCAGGTAATAGTTTAAAAATTGATGTTACTAATA
ACTACGAGGGCGCTGTTAGGCTATTTGACACAGCAATTGTCTTCCACGAGCTCTATGACAGAGACTTACGAATGCAAATC
ACTGGCTATCGGTTCGCCCCTATGGCCAATCGGTTAAAATCCATCATCTTTGGAGAGATTAAGACCAACTTAGCAAAACA
AATTAGCAATCAAATTGACAATAAGGTAGCTGAATCAACTGCTCAACATGACGCAGCATTTGAAGCAAAATTACAAAAGC
AGATTGATAATGCTAATCGTATTTTTGACACAAAAGAAGCTAAACTCCGTGAAGAGATTGAAGATGGCATCAAAAAAGCT
GAAGCTAATGCAGAGGTCAAAGTTGCTGAGGTTAACGCTAAAGTGCTGGAAGCTGAGGAGCTAGCCAAGGCAGTCGATGA
GCGACTCAAAAAATTTTTATCTGATGCTGACACTAAAGAGCAAGATTTTGATAAAAAACTTGAAGAATTTAGAACGTCTC
TTAAAGACCTTGAAGTTGATGAAAAGCAGATTGATGATGCTTTGGCCAAAGCCGGTTTTAGCAAGGATAGCTTAGCTGAC
ATTAAAGCTAAACTGGAAGACACGTCTGAAACTGCCACAGTTACAGCTAACATTGTTGGATCAACTGGCGGCACGTTTTA
CAATCGCAACAGACTGGATGGTGATACTGACAAAGTTATCACTTTTGAACAAGGTTATATTGACATTGCCCATAATGGTG
AAGGTTTTGAAGAAGGCAAGACATACACTATCAGCTTTGAGGCAACCTGCGAGCTACTGCGTAAAGTAGGAATCACAGTG
ACACAGGCTAACATGAAAGGTGCTCGCTTAGTGTTAACACCTAAAAATCCCAAATTAGTTGTCGAGAGTTTTGGCTTGAC
TAAGGATACTGAGACTATCAATGTCTATCCGTTTAGCTACACAGTGCTTGTAACCAGCGACTGGTATAAATCTAAGCAAA
TAGATTTAAACGCGTCGGAGGTGCAGGAATTGGCCCTTGAGATGGCTTATAAAGATGTGGTTGACGGTAATAATGCCACG
ATAGCAGGGCAGTGGTCAGACAGCCCGCAAATGATTTTAGATGGAGGTAGTTAA

Upstream 100 bases:

>100_bases
AAAACTCAATCCGAATAAGAGGAAGATTTTTTGAAATACAACCTGGCACACAAGGTATTGCCGTAAGCGGAGGCATTGCC
AGGTTAACAATTAGTCCAAG

Downstream 100 bases:

>100_bases
TGACTGAAAATATACCATTAAGAGTCCAATTTAAGCGCATGAGCGCTGATGAGTGGGCTCGTAGTGATGTCATCTTGCTT
GAGGGTGAGATAGGTTTTGA

Product: putative platelet-binding protein - phage associated

Products: NA

Alternate protein names: Phage Protein; Truncated Phage Endopeptidase; Hocificity Protein; Gp14 Protein; Phage Infection Protein; Prophage; Minor Protein; Prophage LambdaSa2 PblB

Number of amino acids: Translated: 657; Mature: 657

Protein sequence:

>657_residues
MEVQGLISIKDDNTPLVAAFEDEITQEANSDYKLSFKYPAKHEYRPLIKKGIILEADDLHGTQLFRVFEITKRHGYINVY
GNQVADDLNGYAIDSISVDRVQGMTVMSELAGNIKREHPFSFFSDIDGRHTFNQSDVSVMDALANGKHSIMGQWGGELVR
DKYQVNLLKKAGKDTETLFMYKKNLKSYEETDTIKGLISILHLVAEVEEQREEESREVSDADIGHNEVSKKKTIRVTVES
KLKDTHPIIVEKTIKVQDQDVKTEEDLLAYGKKYFEKTLCDIPGNSLKIDVTNNYEGAVRLFDTAIVFHELYDRDLRMQI
TGYRFAPMANRLKSIIFGEIKTNLAKQISNQIDNKVAESTAQHDAAFEAKLQKQIDNANRIFDTKEAKLREEIEDGIKKA
EANAEVKVAEVNAKVLEAEELAKAVDERLKKFLSDADTKEQDFDKKLEEFRTSLKDLEVDEKQIDDALAKAGFSKDSLAD
IKAKLEDTSETATVTANIVGSTGGTFYNRNRLDGDTDKVITFEQGYIDIAHNGEGFEEGKTYTISFEATCELLRKVGITV
TQANMKGARLVLTPKNPKLVVESFGLTKDTETINVYPFSYTVLVTSDWYKSKQIDLNASEVQELALEMAYKDVVDGNNAT
IAGQWSDSPQMILDGGS

Sequences:

>Translated_657_residues
MEVQGLISIKDDNTPLVAAFEDEITQEANSDYKLSFKYPAKHEYRPLIKKGIILEADDLHGTQLFRVFEITKRHGYINVY
GNQVADDLNGYAIDSISVDRVQGMTVMSELAGNIKREHPFSFFSDIDGRHTFNQSDVSVMDALANGKHSIMGQWGGELVR
DKYQVNLLKKAGKDTETLFMYKKNLKSYEETDTIKGLISILHLVAEVEEQREEESREVSDADIGHNEVSKKKTIRVTVES
KLKDTHPIIVEKTIKVQDQDVKTEEDLLAYGKKYFEKTLCDIPGNSLKIDVTNNYEGAVRLFDTAIVFHELYDRDLRMQI
TGYRFAPMANRLKSIIFGEIKTNLAKQISNQIDNKVAESTAQHDAAFEAKLQKQIDNANRIFDTKEAKLREEIEDGIKKA
EANAEVKVAEVNAKVLEAEELAKAVDERLKKFLSDADTKEQDFDKKLEEFRTSLKDLEVDEKQIDDALAKAGFSKDSLAD
IKAKLEDTSETATVTANIVGSTGGTFYNRNRLDGDTDKVITFEQGYIDIAHNGEGFEEGKTYTISFEATCELLRKVGITV
TQANMKGARLVLTPKNPKLVVESFGLTKDTETINVYPFSYTVLVTSDWYKSKQIDLNASEVQELALEMAYKDVVDGNNAT
IAGQWSDSPQMILDGGS
>Mature_657_residues
MEVQGLISIKDDNTPLVAAFEDEITQEANSDYKLSFKYPAKHEYRPLIKKGIILEADDLHGTQLFRVFEITKRHGYINVY
GNQVADDLNGYAIDSISVDRVQGMTVMSELAGNIKREHPFSFFSDIDGRHTFNQSDVSVMDALANGKHSIMGQWGGELVR
DKYQVNLLKKAGKDTETLFMYKKNLKSYEETDTIKGLISILHLVAEVEEQREEESREVSDADIGHNEVSKKKTIRVTVES
KLKDTHPIIVEKTIKVQDQDVKTEEDLLAYGKKYFEKTLCDIPGNSLKIDVTNNYEGAVRLFDTAIVFHELYDRDLRMQI
TGYRFAPMANRLKSIIFGEIKTNLAKQISNQIDNKVAESTAQHDAAFEAKLQKQIDNANRIFDTKEAKLREEIEDGIKKA
EANAEVKVAEVNAKVLEAEELAKAVDERLKKFLSDADTKEQDFDKKLEEFRTSLKDLEVDEKQIDDALAKAGFSKDSLAD
IKAKLEDTSETATVTANIVGSTGGTFYNRNRLDGDTDKVITFEQGYIDIAHNGEGFEEGKTYTISFEATCELLRKVGITV
TQANMKGARLVLTPKNPKLVVESFGLTKDTETINVYPFSYTVLVTSDWYKSKQIDLNASEVQELALEMAYKDVVDGNNAT
IAGQWSDSPQMILDGGS

Specific function: Unknown

COG id: COG4926

COG function: function code S; Phage-related protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73835; Mature: 73835

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVQGLISIKDDNTPLVAAFEDEITQEANSDYKLSFKYPAKHEYRPLIKKGIILEADDLH
CCCCEEEEEECCCCCEEEEEHHHHHHHCCCCEEEEEECCCCCCCCHHHHCCCEEEECCCC
GTQLFRVFEITKRHGYINVYGNQVADDLNGYAIDSISVDRVQGMTVMSELAGNIKREHPF
CHHHHHHHHHHHHCCEEEEECCHHHHCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCC
SFFSDIDGRHTFNQSDVSVMDALANGKHSIMGQWGGELVRDKYQVNLLKKAGKDTETLFM
HHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHH
YKKNLKSYEETDTIKGLISILHLVAEVEEQREEESREVSDADIGHNEVSKKKTIRVTVES
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEC
KLKDTHPIIVEKTIKVQDQDVKTEEDLLAYGKKYFEKTLCDIPGNSLKIDVTNNYEGAVR
CCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHH
LFDTAIVFHELYDRDLRMQITGYRFAPMANRLKSIIFGEIKTNLAKQISNQIDNKVAEST
HHHHHHHHHHHHCCCEEEEEECEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQHDAAFEAKLQKQIDNANRIFDTKEAKLREEIEDGIKKAEANAEVKVAEVNAKVLEAEE
HHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHH
LAKAVDERLKKFLSDADTKEQDFDKKLEEFRTSLKDLEVDEKQIDDALAKAGFSKDSLAD
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHH
IKAKLEDTSETATVTANIVGSTGGTFYNRNRLDGDTDKVITFEQGYIDIAHNGEGFEEGK
HHHHHCCCCCCEEEEEEEEECCCCCEEECCCCCCCCCCEEEEECCEEEEEECCCCCCCCC
TYTISFEATCELLRKVGITVTQANMKGARLVLTPKNPKLVVESFGLTKDTETINVYPFSY
EEEEEHHHHHHHHHHCCCEEEEECCCCCEEEEECCCCCEEEEECCCCCCCCEEEEEEEEE
TVLVTSDWYKSKQIDLNASEVQELALEMAYKDVVDGNNATIAGQWSDSPQMILDGGS
EEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEECCC
>Mature Secondary Structure
MEVQGLISIKDDNTPLVAAFEDEITQEANSDYKLSFKYPAKHEYRPLIKKGIILEADDLH
CCCCEEEEEECCCCCEEEEEHHHHHHHCCCCEEEEEECCCCCCCCHHHHCCCEEEECCCC
GTQLFRVFEITKRHGYINVYGNQVADDLNGYAIDSISVDRVQGMTVMSELAGNIKREHPF
CHHHHHHHHHHHHCCEEEEECCHHHHCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCC
SFFSDIDGRHTFNQSDVSVMDALANGKHSIMGQWGGELVRDKYQVNLLKKAGKDTETLFM
HHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHH
YKKNLKSYEETDTIKGLISILHLVAEVEEQREEESREVSDADIGHNEVSKKKTIRVTVES
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEC
KLKDTHPIIVEKTIKVQDQDVKTEEDLLAYGKKYFEKTLCDIPGNSLKIDVTNNYEGAVR
CCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHH
LFDTAIVFHELYDRDLRMQITGYRFAPMANRLKSIIFGEIKTNLAKQISNQIDNKVAEST
HHHHHHHHHHHHCCCEEEEEECEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQHDAAFEAKLQKQIDNANRIFDTKEAKLREEIEDGIKKAEANAEVKVAEVNAKVLEAEE
HHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHH
LAKAVDERLKKFLSDADTKEQDFDKKLEEFRTSLKDLEVDEKQIDDALAKAGFSKDSLAD
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHH
IKAKLEDTSETATVTANIVGSTGGTFYNRNRLDGDTDKVITFEQGYIDIAHNGEGFEEGK
HHHHHCCCCCCEEEEEEEEECCCCCEEECCCCCCCCCCEEEEECCEEEEEECCCCCCCCC
TYTISFEATCELLRKVGITVTQANMKGARLVLTPKNPKLVVESFGLTKDTETINVYPFSY
EEEEEHHHHHHHHHHCCCEEEEECCCCCEEEEECCCCCEEEEECCCCCCCCEEEEEEEEE
TVLVTSDWYKSKQIDLNASEVQELALEMAYKDVVDGNNATIAGQWSDSPQMILDGGS
EEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA