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The map label for this gene is obgE [H]

Identifier: 21910546

GI number: 21910546

Start: 1049345

End: 1050652

Strand: Reverse

Name: obgE [H]

Synonym: SpyM3_1010

Alternate gene names: 21910546

Gene position: 1050652-1049345 (Counterclockwise)

Preceding gene: 21910549

Following gene: 21910545

Centisome position: 55.28

GC content: 44.27

Gene sequence:

>1308_bases
ATGTTTTTAGATACGGCAAAAATCAGTGTCCAAGCAGGCCGTGGTGGCGATGGTATGGTAGCTTTTCGTCGTGAAAAGTA
CGTCCCAAATGGCGGTCCTTGGGGAGGAGACGGCGGTAAAGGTGGCTCAGTTATCTTCCGAGTGGACGAAGGTTTGCGTA
CCTTGATGGATTTCCGCTATAATCGTAAATTCAAGGCGAAATCTGGTGAAAAAGGTATGACCAAAGGCATGCACGGCCGT
GGTGCAGAAGATTTGATTGTTTTTGTTCCTCAAGGGACAACGGTTCGTGATGCTGAAACTGGAAAAGTAATTACAGACTT
AGTAGAACATGGTCAAGAAGTGGTCATTGCTAAGGGTGGTCGTGGTGGCCGTGGGAATATCCGTTTTGCAACTCCTCGTA
ATCCTGCGCCAGAGATTGCTGAAAATGGTGAGCCAGGTGAGGAACGTCAGTTAGAGTTAGAACTCAAAATCTTAGCTGAC
GTTGGCTTGGTCGGATTCCCATCTGTTGGGAAATCAACCTTGTTAAGTGTTGTGTCATCAGCTAAACCGAAAATTGGTGC
CTATCATTTTACCACTATTGTTCCTAATCTTGGAATGGTTCGTACAAAGTCAGGTGATAGCTTTGCTATGGCAGATCTGC
CAGGTTTGATTGAAGGTGCTAGCCAAGGGGTTGGTTTGGGAACTCAATTCCTCCGTCATATCGAGCGGACACGGGTTATT
CTTCATGTGATTGACATGTCTGCTAGTGAGGGTCGTGATCCTTACGAAGATTATGTTTCTATTAATAACGAGCTGGAAAC
CTATAATTTGCGATTGATGGAGCGCCCACAGATTATTGTGGCTAATAAAATGGACATGCCAGAGGCTCAAGATAACTTGA
AAGCCTTCAAGAAAAAATTGGCTACCCAATATGACGAGTTTAATGATTTGCCAATGATTTTCTCTATTTCAAGCCTAGCA
CATCAAGGCTTAGAGAACTTGTTAGAAGCAACGGCAGAATTACTTGCTAAGACGGATGAATTCTTATTGTATGATGAATC
TGATCTGGTGGACGAGGAAGCTTACTATGGTTTTGCTGAGGCTGAGAAAGAATTTGAGATCACACGTGACGATGACGCTA
CTTGGGTCTTGTCTGGTGAGAAGTTAGAACGTCTCTTTGTCATGACCAATATGGAACGTGACGAATCCATCATGAAATTT
GCCCGTCAATTGCGCGGTATGGGGGTTGACGAAGCCCTTCGTGAACGTGGAGCAAAAGACGGGGATCTTGTTCGTATTGG
CAAATTTGAATTTGAATTTGTGGATTAA

Upstream 100 bases:

>100_bases
GCGGGCTTATTGCGAGTGCCCTATCAGTATTAATGTAAGGAAACGCTGAAAGGCGTTTTTTTAAAGTAAAAGAAAGTTAG
AGAATAAAAAAAGTATGAGT

Downstream 100 bases:

>100_bases
TGTGGTCTTTAGAAATGGCATTGCCATAGCAACCTTGTGTTTTATCTTTAAGATGGAGGTTTCTGATTATGGGTGATAAA
CCGATATCCTTTAAGGATAA

Product: GTPase ObgE

Products: NA

Alternate protein names: GTP-binding protein obg [H]

Number of amino acids: Translated: 435; Mature: 435

Protein sequence:

>435_residues
MFLDTAKISVQAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFRVDEGLRTLMDFRYNRKFKAKSGEKGMTKGMHGR
GAEDLIVFVPQGTTVRDAETGKVITDLVEHGQEVVIAKGGRGGRGNIRFATPRNPAPEIAENGEPGEERQLELELKILAD
VGLVGFPSVGKSTLLSVVSSAKPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGVGLGTQFLRHIERTRVI
LHVIDMSASEGRDPYEDYVSINNELETYNLRLMERPQIIVANKMDMPEAQDNLKAFKKKLATQYDEFNDLPMIFSISSLA
HQGLENLLEATAELLAKTDEFLLYDESDLVDEEAYYGFAEAEKEFEITRDDDATWVLSGEKLERLFVMTNMERDESIMKF
ARQLRGMGVDEALRERGAKDGDLVRIGKFEFEFVD

Sequences:

>Translated_435_residues
MFLDTAKISVQAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFRVDEGLRTLMDFRYNRKFKAKSGEKGMTKGMHGR
GAEDLIVFVPQGTTVRDAETGKVITDLVEHGQEVVIAKGGRGGRGNIRFATPRNPAPEIAENGEPGEERQLELELKILAD
VGLVGFPSVGKSTLLSVVSSAKPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGVGLGTQFLRHIERTRVI
LHVIDMSASEGRDPYEDYVSINNELETYNLRLMERPQIIVANKMDMPEAQDNLKAFKKKLATQYDEFNDLPMIFSISSLA
HQGLENLLEATAELLAKTDEFLLYDESDLVDEEAYYGFAEAEKEFEITRDDDATWVLSGEKLERLFVMTNMERDESIMKF
ARQLRGMGVDEALRERGAKDGDLVRIGKFEFEFVD
>Mature_435_residues
MFLDTAKISVQAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFRVDEGLRTLMDFRYNRKFKAKSGEKGMTKGMHGR
GAEDLIVFVPQGTTVRDAETGKVITDLVEHGQEVVIAKGGRGGRGNIRFATPRNPAPEIAENGEPGEERQLELELKILAD
VGLVGFPSVGKSTLLSVVSSAKPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGVGLGTQFLRHIERTRVI
LHVIDMSASEGRDPYEDYVSINNELETYNLRLMERPQIIVANKMDMPEAQDNLKAFKKKLATQYDEFNDLPMIFSISSLA
HQGLENLLEATAELLAKTDEFLLYDESDLVDEEAYYGFAEAEKEFEITRDDDATWVLSGEKLERLFVMTNMERDESIMKF
ARQLRGMGVDEALRERGAKDGDLVRIGKFEFEFVD

Specific function: An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. It may play a role in control of the cell cycle, stress response, ribosome biogenesis and in t

COG id: COG0536

COG function: function code R; Predicted GTPase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI24308117, Length=327, Percent_Identity=42.2018348623853, Blast_Score=202, Evalue=5e-52,
Organism=Homo sapiens, GI111955139, Length=295, Percent_Identity=37.9661016949153, Blast_Score=179, Evalue=6e-45,
Organism=Homo sapiens, GI111955063, Length=180, Percent_Identity=40, Blast_Score=127, Evalue=1e-29,
Organism=Homo sapiens, GI4758796, Length=127, Percent_Identity=40.9448818897638, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI4557537, Length=121, Percent_Identity=38.0165289256198, Blast_Score=75, Evalue=9e-14,
Organism=Escherichia coli, GI1789574, Length=330, Percent_Identity=46.0606060606061, Blast_Score=261, Evalue=6e-71,
Organism=Escherichia coli, GI1787454, Length=138, Percent_Identity=34.7826086956522, Blast_Score=71, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17508313, Length=332, Percent_Identity=38.855421686747, Blast_Score=162, Evalue=3e-40,
Organism=Caenorhabditis elegans, GI17552324, Length=322, Percent_Identity=31.055900621118, Blast_Score=139, Evalue=3e-33,
Organism=Caenorhabditis elegans, GI71981008, Length=118, Percent_Identity=38.9830508474576, Blast_Score=78, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17555344, Length=169, Percent_Identity=32.5443786982249, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17509631, Length=140, Percent_Identity=31.4285714285714, Blast_Score=70, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6321962, Length=162, Percent_Identity=40.7407407407407, Blast_Score=120, Evalue=4e-28,
Organism=Saccharomyces cerevisiae, GI6321612, Length=203, Percent_Identity=30.5418719211823, Blast_Score=78, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6319281, Length=126, Percent_Identity=38.0952380952381, Blast_Score=77, Evalue=7e-15,
Organism=Drosophila melanogaster, GI20129375, Length=299, Percent_Identity=41.1371237458194, Blast_Score=194, Evalue=1e-49,
Organism=Drosophila melanogaster, GI24585318, Length=290, Percent_Identity=38.6206896551724, Blast_Score=177, Evalue=1e-44,
Organism=Drosophila melanogaster, GI17981711, Length=127, Percent_Identity=37.7952755905512, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI21356473, Length=126, Percent_Identity=35.7142857142857, Blast_Score=72, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014100
- InterPro:   IPR015349
- InterPro:   IPR006074
- InterPro:   IPR006073
- InterPro:   IPR006169
- InterPro:   IPR002917
- InterPro:   IPR005225 [H]

Pfam domain/function: PF09269 DUF1967; PF01018 GTP1_OBG; PF01926 MMR_HSR1 [H]

EC number: NA

Molecular weight: Translated: 48138; Mature: 48138

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS00905 GTP1_OBG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLDTAKISVQAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFRVDEGLRTLMDFRY
CCCCCEEEEEEECCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHC
NRKFKAKSGEKGMTKGMHGRGAEDLIVFVPQGTTVRDAETGKVITDLVEHGQEVVIAKGG
CCEECCCCCCCCCCCCCCCCCCCCEEEEECCCCEECCCCCCHHHHHHHHCCCEEEEEECC
RGGRGNIRFATPRNPAPEIAENGEPGEERQLELELKILADVGLVGFPSVGKSTLLSVVSS
CCCCCCEEEECCCCCCCHHHCCCCCCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHH
AKPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGVGLGTQFLRHIERTRVI
CCCCCCEEEEEECCCCCCEEEECCCCCEEECCCCHHHHCCCCCCCHHHHHHHHHHHHHEE
LHVIDMSASEGRDPYEDYVSINNELETYNLRLMERPQIIVANKMDMPEAQDNLKAFKKKL
EEEEECCCCCCCCCHHHHHHCCCCEEEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHH
ATQYDEFNDLPMIFSISSLAHQGLENLLEATAELLAKTDEFLLYDESDLVDEEAYYGFAE
HHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHCCHHH
AEKEFEITRDDDATWVLSGEKLERLFVMTNMERDESIMKFARQLRGMGVDEALRERGAKD
CCCCEEEECCCCCEEEEECHHHHEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHCCCCC
GDLVRIGKFEFEFVD
CCEEEEECEEEEECC
>Mature Secondary Structure
MFLDTAKISVQAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFRVDEGLRTLMDFRY
CCCCCEEEEEEECCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHC
NRKFKAKSGEKGMTKGMHGRGAEDLIVFVPQGTTVRDAETGKVITDLVEHGQEVVIAKGG
CCEECCCCCCCCCCCCCCCCCCCCEEEEECCCCEECCCCCCHHHHHHHHCCCEEEEEECC
RGGRGNIRFATPRNPAPEIAENGEPGEERQLELELKILADVGLVGFPSVGKSTLLSVVSS
CCCCCCEEEECCCCCCCHHHCCCCCCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHH
AKPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGVGLGTQFLRHIERTRVI
CCCCCCEEEEEECCCCCCEEEECCCCCEEECCCCHHHHCCCCCCCHHHHHHHHHHHHHEE
LHVIDMSASEGRDPYEDYVSINNELETYNLRLMERPQIIVANKMDMPEAQDNLKAFKKKL
EEEEECCCCCCCCCHHHHHHCCCCEEEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHH
ATQYDEFNDLPMIFSISSLAHQGLENLLEATAELLAKTDEFLLYDESDLVDEEAYYGFAE
HHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHCCHHH
AEKEFEITRDDDATWVLSGEKLERLFVMTNMERDESIMKFARQLRGMGVDEALRERGAKD
CCCCEEEECCCCCEEEEECHHHHEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHCCCCC
GDLVRIGKFEFEFVD
CCEEEEECEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA