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The map label for this gene is licR [H]

Identifier: 21910541

GI number: 21910541

Start: 1043710

End: 1045584

Strand: Reverse

Name: licR [H]

Synonym: SpyM3_1005

Alternate gene names: 21910541

Gene position: 1045584-1043710 (Counterclockwise)

Preceding gene: 21910542

Following gene: 21910540

Centisome position: 55.02

GC content: 38.45

Gene sequence:

>1875_bases
ATGTTATCAAAAAAAGAACTGGCCATCATAACATTTCTAATCCATCACAAAGAGCAGTTTGTCTCTAGTGCAACTCTGGC
TGAGGTTATTGGTATGAGTGACCGTACGGTTAGGAAATACCTCAAAGAACTGATCAGTAGCCTTCCTGAACACGGAGCTC
ACATCATTTCTAAACAAGGTCGAGGTTACTGCTTAGAAATTGACCATTCTATGGCATTTGACATCTTTTGGCAAGAAAGT
GTGACGTCTAAAAAACGTTTGGCAGATGTGACTCAAGTGGAAGAATCGGTTGATCGAGAAGATTATGTGCTTCATAAATT
CTTTTTTGAAGATGCCGTTCAGGATTTTGAAGAGCTTTGTCAAGAATTGTATATCAGTCGGACAACTTTAAAACATGTTT
TAGCAGGCATTAAGGAGCGCATAATACCTTACCAGTTAGAGCTTGAAATAACTCACCAACATATTCAAATAAAGGGTAAA
GAAGAGGACATTAGGCATTTTATCATGGACTATTTTTTTGTTACTAGTTTTGATAATACCTTGTCCACCATGGTAGGTAA
TACCTTTCTTGAAGGTATTAATTTTGCAGAAATCATGATTATTGTCTTGGATGAATGTCGGGATGCTAAGTTGAAACTTT
CTGATTTTGTCATGAATAATCTAGTCTTGCATATTGCCCTAATGGTTCAGCGTATTCGATCGGGGTGTCCATTAGAACTG
TTTTCCATTCCAATAGCTATTCGTCAGTCTGATGAGTATCAAGTAGCTCTGCGCATTTTGTATCGAGTGGAAGAAGTGAT
GGGGATACGTTTTCCTAAAGAGGAGGCTAATTATATTGCACTGCATCTAAAGGTCAAACATTCTGTTGGTAAGCATTGGC
AAGATGATAATACCGATGAAAAGTTGCAGGACCATTTAAAAGCATGTATTGCCAAGATTAGTCAATTGACAGACATGACT
TTAGAAACAGATACCAATTTATTTCAAGGTTTATTAGCCCACATGATGCCCTTGACCACACGTCTTGAAAACCATATTCA
GCTGACTAATCCTTTAACTGAGGAAATTAAAAGCCAGTATCCTGAAATATTTACCCTTACCAAGCAGACCTTTTCGGATT
TGCTTGTATGTCAAAAGAATGATGTCTCAGATGATGAATGGGCTTATATTAGTTTGCATTTAATGGCGGCCATTGAGCGT
TATTCAAACCGTCATAAATTGAGGGTTCTAGTAGTTTGTGCCACAGGTTATGGTAGTGCCATGATGTTGAAAAATCGCTT
GGAAAAGGAATTTGAAGGACGTTTGCGTATTGTCGATGTTATCAGTTACTATGAAATAACCGAAGAGCGACTGAAAACCG
TTGATTTGATTATTTCCTCTATCAGCCTTGCCAATCTGATGTTTTTAACACCAGTGATTACTGTCAGTGTTTTTTTGTCA
AATCAGGATATTGAAACTATTCGACAATTTATTGGAGAACAAGAAGGTATCAAGAAAGAGGTCAGTTTACCGTCACAGAT
GAGTTTAGCAAAAGCAGAGCAGCTTCTAACAGGTGTTTTTAGCCCTAATCGTTTTCTTTATTTAGACGAGAAAATCTCAA
AGGAAGACTTGCTTTTACGGATGATTGCTTGTCTTGACGAGGCGGGAACAGAAACGTTTGTAGAGGACTTCTATCATCAA
ATGGTACTGAGGGAAAATTACAGCCCAGTCATCTATGGAGAAGTGCTTGCCTTTCCGCATCCTGCTAATCCCATGACTTA
TTCTGAACAGGTAGTAGTGGCTATTTGCCGAGAGCTCTTGAGTGGGACAAGGCGCATCAAGCTGTTCATTTTGTCTTTCT
ATTATCCCCGTCTAAAGGGCATAATCATAGGTTAA

Upstream 100 bases:

>100_bases
TTTCACAATCAATGCGGAAAATGATGGTCACCTTTTTCAGGAAATATTTGGTACACTAAAAGAGGGTAGAAAGCGTTTTC
TAAAGTAGTAAGGAGGACTA

Downstream 100 bases:

>100_bases
AATATGTATCACCAGGTTTGGCATCTTTTGTCAATCAGGTGGAGCTTCAGCAAGCGTTACTAGAAGAACCAAATTATTCC
AAATTCATGACAGTGTTTAC

Product: putative transcriptional antiterminator

Products: NA

Alternate protein names: Putative phosphotransferase enzyme IIB component; Putative PTS system EIIB component; Putative phosphotransferase enzyme IIA component; Putative PTS system EIIA component [H]

Number of amino acids: Translated: 624; Mature: 624

Protein sequence:

>624_residues
MLSKKELAIITFLIHHKEQFVSSATLAEVIGMSDRTVRKYLKELISSLPEHGAHIISKQGRGYCLEIDHSMAFDIFWQES
VTSKKRLADVTQVEESVDREDYVLHKFFFEDAVQDFEELCQELYISRTTLKHVLAGIKERIIPYQLELEITHQHIQIKGK
EEDIRHFIMDYFFVTSFDNTLSTMVGNTFLEGINFAEIMIIVLDECRDAKLKLSDFVMNNLVLHIALMVQRIRSGCPLEL
FSIPIAIRQSDEYQVALRILYRVEEVMGIRFPKEEANYIALHLKVKHSVGKHWQDDNTDEKLQDHLKACIAKISQLTDMT
LETDTNLFQGLLAHMMPLTTRLENHIQLTNPLTEEIKSQYPEIFTLTKQTFSDLLVCQKNDVSDDEWAYISLHLMAAIER
YSNRHKLRVLVVCATGYGSAMMLKNRLEKEFEGRLRIVDVISYYEITEERLKTVDLIISSISLANLMFLTPVITVSVFLS
NQDIETIRQFIGEQEGIKKEVSLPSQMSLAKAEQLLTGVFSPNRFLYLDEKISKEDLLLRMIACLDEAGTETFVEDFYHQ
MVLRENYSPVIYGEVLAFPHPANPMTYSEQVVVAICRELLSGTRRIKLFILSFYYPRLKGIIIG

Sequences:

>Translated_624_residues
MLSKKELAIITFLIHHKEQFVSSATLAEVIGMSDRTVRKYLKELISSLPEHGAHIISKQGRGYCLEIDHSMAFDIFWQES
VTSKKRLADVTQVEESVDREDYVLHKFFFEDAVQDFEELCQELYISRTTLKHVLAGIKERIIPYQLELEITHQHIQIKGK
EEDIRHFIMDYFFVTSFDNTLSTMVGNTFLEGINFAEIMIIVLDECRDAKLKLSDFVMNNLVLHIALMVQRIRSGCPLEL
FSIPIAIRQSDEYQVALRILYRVEEVMGIRFPKEEANYIALHLKVKHSVGKHWQDDNTDEKLQDHLKACIAKISQLTDMT
LETDTNLFQGLLAHMMPLTTRLENHIQLTNPLTEEIKSQYPEIFTLTKQTFSDLLVCQKNDVSDDEWAYISLHLMAAIER
YSNRHKLRVLVVCATGYGSAMMLKNRLEKEFEGRLRIVDVISYYEITEERLKTVDLIISSISLANLMFLTPVITVSVFLS
NQDIETIRQFIGEQEGIKKEVSLPSQMSLAKAEQLLTGVFSPNRFLYLDEKISKEDLLLRMIACLDEAGTETFVEDFYHQ
MVLRENYSPVIYGEVLAFPHPANPMTYSEQVVVAICRELLSGTRRIKLFILSFYYPRLKGIIIG
>Mature_624_residues
MLSKKELAIITFLIHHKEQFVSSATLAEVIGMSDRTVRKYLKELISSLPEHGAHIISKQGRGYCLEIDHSMAFDIFWQES
VTSKKRLADVTQVEESVDREDYVLHKFFFEDAVQDFEELCQELYISRTTLKHVLAGIKERIIPYQLELEITHQHIQIKGK
EEDIRHFIMDYFFVTSFDNTLSTMVGNTFLEGINFAEIMIIVLDECRDAKLKLSDFVMNNLVLHIALMVQRIRSGCPLEL
FSIPIAIRQSDEYQVALRILYRVEEVMGIRFPKEEANYIALHLKVKHSVGKHWQDDNTDEKLQDHLKACIAKISQLTDMT
LETDTNLFQGLLAHMMPLTTRLENHIQLTNPLTEEIKSQYPEIFTLTKQTFSDLLVCQKNDVSDDEWAYISLHLMAAIER
YSNRHKLRVLVVCATGYGSAMMLKNRLEKEFEGRLRIVDVISYYEITEERLKTVDLIISSISLANLMFLTPVITVSVFLS
NQDIETIRQFIGEQEGIKKEVSLPSQMSLAKAEQLLTGVFSPNRFLYLDEKISKEDLLLRMIACLDEAGTETFVEDFYHQ
MVLRENYSPVIYGEVLAFPHPANPMTYSEQVVVAICRELLSGTRRIKLFILSFYYPRLKGIIIG

Specific function: Positive regulator of the licABCH operon [H]

COG id: COG3711

COG function: function code K; Transcriptional antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIB type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR007737
- InterPro:   IPR011608
- InterPro:   IPR016152
- InterPro:   IPR002178
- InterPro:   IPR013011
- InterPro:   IPR003501
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11; PF05043 Mga; PF00874 PRD; PF00359 PTS_EIIA_2; PF02302 PTS_IIB [H]

EC number: =2.7.1.69 [H]

Molecular weight: Translated: 72112; Mature: 72112

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: PS51099 PTS_EIIB_TYPE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSKKELAIITFLIHHKEQFVSSATLAEVIGMSDRTVRKYLKELISSLPEHGAHIISKQG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHCCC
RGYCLEIDHSMAFDIFWQESVTSKKRLADVTQVEESVDREDYVLHKFFFEDAVQDFEELC
CCEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
QELYISRTTLKHVLAGIKERIIPYQLELEITHQHIQIKGKEEDIRHFIMDYFFVTSFDNT
HHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEECCHHHHHHHHHHHHHHHCCCHH
LSTMVGNTFLEGINFAEIMIIVLDECRDAKLKLSDFVMNNLVLHIALMVQRIRSGCPLEL
HHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
FSIPIAIRQSDEYQVALRILYRVEEVMGIRFPKEEANYIALHLKVKHSVGKHWQDDNTDE
EECCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEHHHCCCCCCCCCHH
KLQDHLKACIAKISQLTDMTLETDTNLFQGLLAHMMPLTTRLENHIQLTNPLTEEIKSQY
HHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHC
PEIFTLTKQTFSDLLVCQKNDVSDDEWAYISLHLMAAIERYSNRHKLRVLVVCATGYGSA
CHHEEHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHCCCCEEEEEEEEECCCCHH
MMLKNRLEKEFEGRLRIVDVISYYEITEERLKTVDLIISSISLANLMFLTPVITVSVFLS
HHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NQDIETIRQFIGEQEGIKKEVSLPSQMSLAKAEQLLTGVFSPNRFLYLDEKISKEDLLLR
CCCHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHH
MIACLDEAGTETFVEDFYHQMVLRENYSPVIYGEVLAFPHPANPMTYSEQVVVAICRELL
HHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEHEEECCCCCCCCCCHHHHHHHHHHHHH
SGTRRIKLFILSFYYPRLKGIIIG
CCCHHEEHHHHHHHHHHHCCEECC
>Mature Secondary Structure
MLSKKELAIITFLIHHKEQFVSSATLAEVIGMSDRTVRKYLKELISSLPEHGAHIISKQG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHCCC
RGYCLEIDHSMAFDIFWQESVTSKKRLADVTQVEESVDREDYVLHKFFFEDAVQDFEELC
CCEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
QELYISRTTLKHVLAGIKERIIPYQLELEITHQHIQIKGKEEDIRHFIMDYFFVTSFDNT
HHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEECCHHHHHHHHHHHHHHHCCCHH
LSTMVGNTFLEGINFAEIMIIVLDECRDAKLKLSDFVMNNLVLHIALMVQRIRSGCPLEL
HHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
FSIPIAIRQSDEYQVALRILYRVEEVMGIRFPKEEANYIALHLKVKHSVGKHWQDDNTDE
EECCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEHHHCCCCCCCCCHH
KLQDHLKACIAKISQLTDMTLETDTNLFQGLLAHMMPLTTRLENHIQLTNPLTEEIKSQY
HHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHC
PEIFTLTKQTFSDLLVCQKNDVSDDEWAYISLHLMAAIERYSNRHKLRVLVVCATGYGSA
CHHEEHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHCCCCEEEEEEEEECCCCHH
MMLKNRLEKEFEGRLRIVDVISYYEITEERLKTVDLIISSISLANLMFLTPVITVSVFLS
HHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NQDIETIRQFIGEQEGIKKEVSLPSQMSLAKAEQLLTGVFSPNRFLYLDEKISKEDLLLR
CCCHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHH
MIACLDEAGTETFVEDFYHQMVLRENYSPVIYGEVLAFPHPANPMTYSEQVVVAICRELL
HHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEHEEECCCCCCCCCCHHHHHHHHHHHHH
SGTRRIKLFILSFYYPRLKGIIIG
CCCHHEEHHHHHHHHHHHCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8990303; 8969509; 9384377; 10438772 [H]