Click here to switch to the map view.

The map label for this gene is yknZ [H]

Identifier: 21910101

GI number: 21910101

Start: 621122

End: 622342

Strand: Direct

Name: yknZ [H]

Synonym: SpyM3_0565

Alternate gene names: 21910101

Gene position: 621122-622342 (Clockwise)

Preceding gene: 21910100

Following gene: 21910102

Centisome position: 32.68

GC content: 35.63

Gene sequence:

>1221_bases
ATGGAAAATTGGAAATTCGCTCTTAGCTCAATTTGGGGGCATAAGATGCGCTCAATCCTGACAATGTTGGGAATTATCAT
CGGTGTAGCAGCAGTTGTGATTATTATGGGGTTGGGAAATGCTATGAAAAATAGTGTAACAAGCACATTTTCTAGCAAGC
AAAAAGACATTCAACTCTATTTTCAAGAAAAAGGAGAAGAAGAAGACCTGTATGCCGGATTGCACACGCATGAAAATAAT
CACGAAGTGAAGCCAGAGTGGTTAGAACAAATTGTTAAAGATATCGATGGTATTGATTCTTATTACTTTACCAATTCTGC
TACTTCTACTATTTCGTATGAAAAAAAGAAAGTAGACAATGCTTCGATCATAGGGGTAAGTAAAGATTATTTTAATATAA
AAAACTATGATATCGTAGCTGGTCGTACACTAACAGATAATGATTATTCTAATTTTTCGCGTATCATTCTTTTAGATACA
GTATTAGCCGATGACCTATTTGGCGAAGGTAATTATAAGTCAGCTTTAAATAAAGTGGTAAGTTTATCTGATAAAGATTA
TTTAGTTATTGGTGTTTATAAAACTGATCAGACGCCAGTTTCTTTTGATGGATTATCAGGCGGCGCTGTCATGGCAAATA
CTCAGGTAGCTTCAGAGTTTGGCACCAAAGAAATAGGATCTATCTACATTCATGTGAACGATATTCAAAACAGTATGAAC
TTAGGAAATCAAGCAGCTGATATGCTAACCAACATATCGCATATTAAAGATGGACAGTACGCTGTTCCTGATAATAGCAA
AATCGTTGAAGAAATCAATAGTCAGTTCAGTATCATGACAACAGTCATAGGTTCAATTGCAGCGATCTCTCTTTTAGTGG
GAGGAATTGGTGTTATGAATATTATGTTGGTATCTGTCACAGAGCGAACTAGGGAAATTGGTTTACGTAAAGCACTTGGT
GCAACACGCCTGAAAATTTTATCACAATTTTTGATTGAATCCGTTGTTCTAACAGTTCTTGGAGGCTTGATAGGATTATT
ATTAGCTCAATTAAGTGTAGGGGCTTTAGGAAATGCGATGACATTAAAAGGAGCTTGTATTTCTCTTGATGTGGCCTTAA
TAGCAGTTTTATTTTCTGCCTCAATAGGTGTCTTTTTTGGAATGTTGCCAGCTAATAAAGCTAGTAAGTTAGATCCAATT
GAGGCATTACGTTATGAATAG

Upstream 100 bases:

>100_bases
CAGAAATTGCTGATTTTGCAACTCGGAAAATTATTATTCGTGATGGTGATATCACAACGGATACTACAGCTAGTGTTGTT
ATTGACTAGGAGGAAAAATA

Downstream 100 bases:

>100_bases
AATAGTTCGTATCAATTAATCTATAGACGCTGACTAGTTTAACGTCTGATTATATCTATTTTTTGTATTAGCACAGTAGT
TATATCATTGAAGTGTTAGT

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MENWKFALSSIWGHKMRSILTMLGIIIGVAAVVIIMGLGNAMKNSVTSTFSSKQKDIQLYFQEKGEEEDLYAGLHTHENN
HEVKPEWLEQIVKDIDGIDSYYFTNSATSTISYEKKKVDNASIIGVSKDYFNIKNYDIVAGRTLTDNDYSNFSRIILLDT
VLADDLFGEGNYKSALNKVVSLSDKDYLVIGVYKTDQTPVSFDGLSGGAVMANTQVASEFGTKEIGSIYIHVNDIQNSMN
LGNQAADMLTNISHIKDGQYAVPDNSKIVEEINSQFSIMTTVIGSIAAISLLVGGIGVMNIMLVSVTERTREIGLRKALG
ATRLKILSQFLIESVVLTVLGGLIGLLLAQLSVGALGNAMTLKGACISLDVALIAVLFSASIGVFFGMLPANKASKLDPI
EALRYE

Sequences:

>Translated_406_residues
MENWKFALSSIWGHKMRSILTMLGIIIGVAAVVIIMGLGNAMKNSVTSTFSSKQKDIQLYFQEKGEEEDLYAGLHTHENN
HEVKPEWLEQIVKDIDGIDSYYFTNSATSTISYEKKKVDNASIIGVSKDYFNIKNYDIVAGRTLTDNDYSNFSRIILLDT
VLADDLFGEGNYKSALNKVVSLSDKDYLVIGVYKTDQTPVSFDGLSGGAVMANTQVASEFGTKEIGSIYIHVNDIQNSMN
LGNQAADMLTNISHIKDGQYAVPDNSKIVEEINSQFSIMTTVIGSIAAISLLVGGIGVMNIMLVSVTERTREIGLRKALG
ATRLKILSQFLIESVVLTVLGGLIGLLLAQLSVGALGNAMTLKGACISLDVALIAVLFSASIGVFFGMLPANKASKLDPI
EALRYE
>Mature_406_residues
MENWKFALSSIWGHKMRSILTMLGIIIGVAAVVIIMGLGNAMKNSVTSTFSSKQKDIQLYFQEKGEEEDLYAGLHTHENN
HEVKPEWLEQIVKDIDGIDSYYFTNSATSTISYEKKKVDNASIIGVSKDYFNIKNYDIVAGRTLTDNDYSNFSRIILLDT
VLADDLFGEGNYKSALNKVVSLSDKDYLVIGVYKTDQTPVSFDGLSGGAVMANTQVASEFGTKEIGSIYIHVNDIQNSMN
LGNQAADMLTNISHIKDGQYAVPDNSKIVEEINSQFSIMTTVIGSIAAISLLVGGIGVMNIMLVSVTERTREIGLRKALG
ATRLKILSQFLIESVVLTVLGGLIGLLLAQLSVGALGNAMTLKGACISLDVALIAVLFSASIGVFFGMLPANKASKLDPI
EALRYE

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

Organism=Escherichia coli, GI1787105, Length=418, Percent_Identity=32.2966507177034, Blast_Score=149, Evalue=3e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 44081; Mature: 44081

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENWKFALSSIWGHKMRSILTMLGIIIGVAAVVIIMGLGNAMKNSVTSTFSSKQKDIQLY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHEEEE
FQEKGEEEDLYAGLHTHENNHEVKPEWLEQIVKDIDGIDSYYFTNSATSTISYEKKKVDN
ECCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCEEHHHHHCCC
ASIIGVSKDYFNIKNYDIVAGRTLTDNDYSNFSRIILLDTVLADDLFGEGNYKSALNKVV
CEEEEECCCCCCCCCEEEEECCEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
SLSDKDYLVIGVYKTDQTPVSFDGLSGGAVMANTQVASEFGTKEIGSIYIHVNDIQNSMN
HCCCCCEEEEEEEECCCCCCEECCCCCCEEEECCHHHHHCCCCCCCEEEEEEECHHHHHC
LGNQAADMLTNISHIKDGQYAVPDNSKIVEEINSQFSIMTTVIGSIAAISLLVGGIGVMN
CCHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IMLVSVTERTREIGLRKALGATRLKILSQFLIESVVLTVLGGLIGLLLAQLSVGALGNAM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
TLKGACISLDVALIAVLFSASIGVFFGMLPANKASKLDPIEALRYE
EECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCC
>Mature Secondary Structure
MENWKFALSSIWGHKMRSILTMLGIIIGVAAVVIIMGLGNAMKNSVTSTFSSKQKDIQLY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHEEEE
FQEKGEEEDLYAGLHTHENNHEVKPEWLEQIVKDIDGIDSYYFTNSATSTISYEKKKVDN
ECCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCEEHHHHHCCC
ASIIGVSKDYFNIKNYDIVAGRTLTDNDYSNFSRIILLDTVLADDLFGEGNYKSALNKVV
CEEEEECCCCCCCCCEEEEECCEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
SLSDKDYLVIGVYKTDQTPVSFDGLSGGAVMANTQVASEFGTKEIGSIYIHVNDIQNSMN
HCCCCCEEEEEEEECCCCCCEECCCCCCEEEECCHHHHHCCCCCCCEEEEEEECHHHHHC
LGNQAADMLTNISHIKDGQYAVPDNSKIVEEINSQFSIMTTVIGSIAAISLLVGGIGVMN
CCHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IMLVSVTERTREIGLRKALGATRLKILSQFLIESVVLTVLGGLIGLLLAQLSVGALGNAM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
TLKGACISLDVALIAVLFSASIGVFFGMLPANKASKLDPIEALRYE
EECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]