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The map label for this gene is atpB [H]

Identifier: 21910030

GI number: 21910030

Start: 545756

End: 546472

Strand: Direct

Name: atpB [H]

Synonym: SpyM3_0494

Alternate gene names: 21910030

Gene position: 545756-546472 (Clockwise)

Preceding gene: 21910029

Following gene: 21910031

Centisome position: 28.72

GC content: 38.35

Gene sequence:

>717_bases
ATGGAAGAAGCTAAAATACCCATGCTAAAGCTTGGTCCAATAACCTTTAATTTGACCCTACTTGCTGTTTGTATTGTCAC
AATTGCTGTTATCTTTGCCTTTGTTTTTTGGGCAAGTCGCCAAATGAAATTGAAACCAGAAGGGAAGCAAACTGCTTTAG
AATATTTAATCAGTTTTGTGGATGGTATTGGAGAAGAGCACTTAGATCATAATCTACAAAAATCTTATTCGCTGTTACTC
TTTACCATTTTTCTCTTTGTGGCTGTCGCTAATAATTTAGGGTTATTTACTAAGTTAGAGACAGTTAATGGCTATAACCT
ATGGACCTCGCCAACAGCCAATCTGGCTTTTGACCTTGCTCTATCTCTTTTTATTACCTTAATGGTACACATTGAAGGGG
TTAGACGTCGTGGCTTGGTTGCCCATTTGAAACGTTTGGCTACACCGTGGCCAATGACTCCGATGAATTTATTAGAAGAG
TTCACAAATTTCTTATCACTTGCCATTAGGTTATTCGGTAATATCTTTGCCGGGGAAGTTGTTACAGGTTTGATTGTTCA
ACTGGCCAATTATCGAGTTTATTGGTGGCCGATCGCTTTCCTAGTCAATATGGCGTGGACAGCCTTTTCAGTCTTTATTT
CCTGCATACAGGCTTTTGTTTTCACAAAACTAACAGCGACCTATCTAGGAAAGAAAGTTAATGAATCAGAAGAATAA

Upstream 100 bases:

>100_bases
TTGGGTGTTGCCTTTATCGAAGGTACTTTCTTTGTTACCCTTGTTATGGCCTTCATTCTTAAATAACAGCCTATTTGATA
ATAGAAAAGGAGGGTGTTAG

Downstream 100 bases:

>100_bases
GGAAGGAGAACAAACGAATGTCAATCACATTTGGTGAACTCGTTGGGAATTTTATTCTAGTAACAGGTTCTGTAATCGTC
TTGTTACTCTTGATCAAAAA

Product: F0F1 ATP synthase subunit A

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F0 sector subunit a; F-ATPase subunit 6 [H]

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MEEAKIPMLKLGPITFNLTLLAVCIVTIAVIFAFVFWASRQMKLKPEGKQTALEYLISFVDGIGEEHLDHNLQKSYSLLL
FTIFLFVAVANNLGLFTKLETVNGYNLWTSPTANLAFDLALSLFITLMVHIEGVRRRGLVAHLKRLATPWPMTPMNLLEE
FTNFLSLAIRLFGNIFAGEVVTGLIVQLANYRVYWWPIAFLVNMAWTAFSVFISCIQAFVFTKLTATYLGKKVNESEE

Sequences:

>Translated_238_residues
MEEAKIPMLKLGPITFNLTLLAVCIVTIAVIFAFVFWASRQMKLKPEGKQTALEYLISFVDGIGEEHLDHNLQKSYSLLL
FTIFLFVAVANNLGLFTKLETVNGYNLWTSPTANLAFDLALSLFITLMVHIEGVRRRGLVAHLKRLATPWPMTPMNLLEE
FTNFLSLAIRLFGNIFAGEVVTGLIVQLANYRVYWWPIAFLVNMAWTAFSVFISCIQAFVFTKLTATYLGKKVNESEE
>Mature_238_residues
MEEAKIPMLKLGPITFNLTLLAVCIVTIAVIFAFVFWASRQMKLKPEGKQTALEYLISFVDGIGEEHLDHNLQKSYSLLL
FTIFLFVAVANNLGLFTKLETVNGYNLWTSPTANLAFDLALSLFITLMVHIEGVRRRGLVAHLKRLATPWPMTPMNLLEE
FTNFLSLAIRLFGNIFAGEVVTGLIVQLANYRVYWWPIAFLVNMAWTAFSVFISCIQAFVFTKLTATYLGKKVNESEE

Specific function: Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane [H]

COG id: COG0356

COG function: function code C; F0F1-type ATP synthase, subunit a

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase A chain family [H]

Homologues:

Organism=Escherichia coli, GI1790176, Length=205, Percent_Identity=30.7317073170732, Blast_Score=75, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000568
- InterPro:   IPR023011 [H]

Pfam domain/function: PF00119 ATP-synt_A [H]

EC number: 3.6.3.14

Molecular weight: Translated: 26924; Mature: 26924

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: PS00449 ATPASE_A

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEAKIPMLKLGPITFNLTLLAVCIVTIAVIFAFVFWASRQMKLKPEGKQTALEYLISFV
CCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHH
DGIGEEHLDHNLQKSYSLLLFTIFLFVAVANNLGLFTKLETVNGYNLWTSPTANLAFDLA
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCCCCCCCHHHHHHHH
LSLFITLMVHIEGVRRRGLVAHLKRLATPWPMTPMNLLEEFTNFLSLAIRLFGNIFAGEV
HHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTGLIVQLANYRVYWWPIAFLVNMAWTAFSVFISCIQAFVFTKLTATYLGKKVNESEE
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MEEAKIPMLKLGPITFNLTLLAVCIVTIAVIFAFVFWASRQMKLKPEGKQTALEYLISFV
CCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHH
DGIGEEHLDHNLQKSYSLLLFTIFLFVAVANNLGLFTKLETVNGYNLWTSPTANLAFDLA
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCCCCCCCHHHHHHHH
LSLFITLMVHIEGVRRRGLVAHLKRLATPWPMTPMNLLEEFTNFLSLAIRLFGNIFAGEV
HHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTGLIVQLANYRVYWWPIAFLVNMAWTAFSVFISCIQAFVFTKLTATYLGKKVNESEE
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11296296 [H]