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The map label for this gene is ybhK [C]

Identifier: 21909999

GI number: 21909999

Start: 509760

End: 510593

Strand: Direct

Name: ybhK [C]

Synonym: SpyM3_0463

Alternate gene names: 21909999

Gene position: 509760-510593 (Clockwise)

Preceding gene: 21909998

Following gene: 21910000

Centisome position: 26.82

GC content: 41.97

Gene sequence:

>834_bases
ATGCAATTAGCCCCGCCAGGAGACTTACGGAATGTCTTGTTAGCGATGAGTGACATGCCAAAATTTTATGAGCGGGTTTT
CCAATACCGTTTTAACGAGAGTGATGGAGCCTTGGCTGGTCACCCTCTAGGCAATCTCATTATTGCTGGTATCTCTGAAA
TGCAAGGCTCAACCTACAATGCCATTCAAATTTTAACCAAATTTTTCCATATTACAGGTAAAATTTACCCCTCTAGCGAG
CAGGCCTTGACCCTTCATGCTGTTTTTAAAGATGGGCATGAAGTAGCAGGAGAAAGTTCTATTGCCAAATACCAAGGCAT
GATTGACCATGTCTATGTGACCAACACCTACAACGACCAAAAGCCTCAGGCCAGTCGTAAGGTGGTTGAGGCTATTCTAG
AAAGTGACATGATTGTCTTGGGACCAGGCTCACTGTTTACCTCTATTTTACCTAATTTGGTCATTCCAGAAATTAAAGAA
GCTTTGCGCCAGACTAAAGCAGAAGTGGTGTATATTTGTAATATCATGACCCAGTATGGTGAAACAGAACAATTTTCAGA
TGCAGATCATGTGGCTGTTTTAAATCAGCACTTAGGAAGAGATTTGATTGATACGGTTTTGGTAAATGTGGCTAAGGTGC
CGCAGGCTTACATGAATTCTAACAAATTTGATGAATACCTCGTTCAGGTTGATCACGACTTTGCTGGCCTTTGCAGGGCT
GCTAAGCGTGTGATTTCGTCTTATTTTTTACGGTTGGAGAATGGCGGAGCTTTTCACGATGGCAACTTAGTGGTGGAAGA
ATTAATGAATTTAGTGAGGATAGTCAAGCAATGA

Upstream 100 bases:

>100_bases
CTCCATTATCCTAAAAAGCCTTCGTAATGAAGCAGTTGATATTACTGCTGTGGTCACTGTTGCAGATGATGGTGGTTCCT
CAGGAGAACTTCGTAATGCC

Downstream 100 bases:

>100_bases
GTTTTACAACCAAGGTCAAAGAGGAATTAATTCACTTGTCCACAGGTGACAACAATGAATTGGCCGCCATTATCAAATTA
TCAGGCAGCTTGGGCTTAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MQLAPPGDLRNVLLAMSDMPKFYERVFQYRFNESDGALAGHPLGNLIIAGISEMQGSTYNAIQILTKFFHITGKIYPSSE
QALTLHAVFKDGHEVAGESSIAKYQGMIDHVYVTNTYNDQKPQASRKVVEAILESDMIVLGPGSLFTSILPNLVIPEIKE
ALRQTKAEVVYICNIMTQYGETEQFSDADHVAVLNQHLGRDLIDTVLVNVAKVPQAYMNSNKFDEYLVQVDHDFAGLCRA
AKRVISSYFLRLENGGAFHDGNLVVEELMNLVRIVKQ

Sequences:

>Translated_277_residues
MQLAPPGDLRNVLLAMSDMPKFYERVFQYRFNESDGALAGHPLGNLIIAGISEMQGSTYNAIQILTKFFHITGKIYPSSE
QALTLHAVFKDGHEVAGESSIAKYQGMIDHVYVTNTYNDQKPQASRKVVEAILESDMIVLGPGSLFTSILPNLVIPEIKE
ALRQTKAEVVYICNIMTQYGETEQFSDADHVAVLNQHLGRDLIDTVLVNVAKVPQAYMNSNKFDEYLVQVDHDFAGLCRA
AKRVISSYFLRLENGGAFHDGNLVVEELMNLVRIVKQ
>Mature_277_residues
MQLAPPGDLRNVLLAMSDMPKFYERVFQYRFNESDGALAGHPLGNLIIAGISEMQGSTYNAIQILTKFFHITGKIYPSSE
QALTLHAVFKDGHEVAGESSIAKYQGMIDHVYVTNTYNDQKPQASRKVVEAILESDMIVLGPGSLFTSILPNLVIPEIKE
ALRQTKAEVVYICNIMTQYGETEQFSDADHVAVLNQHLGRDLIDTVLVNVAKVPQAYMNSNKFDEYLVQVDHDFAGLCRA
AKRVISSYFLRLENGGAFHDGNLVVEELMNLVRIVKQ

Specific function: Unknown

COG id: COG0391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0052 family

Homologues:

Organism=Escherichia coli, GI1786997, Length=203, Percent_Identity=33.4975369458128, Blast_Score=120, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y463_STRP3 (Q8K850)

Other databases:

- EMBL:   AE014074
- EMBL:   BA000034
- RefSeq:   NP_664267.1
- RefSeq:   NP_802654.1
- ProteinModelPortal:   Q8K850
- SMR:   Q8K850
- EnsemblBacteria:   EBSTRT00000034530
- EnsemblBacteria:   EBSTRT00000036987
- GeneID:   1008777
- GeneID:   1066604
- GenomeReviews:   AE014074_GR
- GenomeReviews:   BA000034_GR
- KEGG:   spg:SpyM3_0463
- KEGG:   sps:SPs1392
- GeneTree:   EBGT00050000028089
- HOGENOM:   HBG321904
- OMA:   FEYRFSG
- ProtClustDB:   CLSK698418
- BioCyc:   SPYO193567:SPS1392-MONOMER
- BioCyc:   SPYO198466:SPYM3_0463-MONOMER
- InterPro:   IPR002882
- InterPro:   IPR010119
- TIGRFAMs:   TIGR01826

Pfam domain/function: PF01933 UPF0052

EC number: NA

Molecular weight: Translated: 30898; Mature: 30898

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLAPPGDLRNVLLAMSDMPKFYERVFQYRFNESDGALAGHPLGNLIIAGISEMQGSTYN
CCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHH
AIQILTKFFHITGKIYPSSEQALTLHAVFKDGHEVAGESSIAKYQGMIDHVYVTNTYNDQ
HHHHHHHHHHHHCCCCCCCCCCEEEHHHHHCCHHHCCCHHHHHHHCCHHEEEEECCCCCC
KPQASRKVVEAILESDMIVLGPGSLFTSILPNLVIPEIKEALRQTKAEVVYICNIMTQYG
CCHHHHHHHHHHHHCCEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
ETEQFSDADHVAVLNQHLGRDLIDTVLVNVAKVPQAYMNSNKFDEYLVQVDHDFAGLCRA
CCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHH
AKRVISSYFLRLENGGAFHDGNLVVEELMNLVRIVKQ
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQLAPPGDLRNVLLAMSDMPKFYERVFQYRFNESDGALAGHPLGNLIIAGISEMQGSTYN
CCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHH
AIQILTKFFHITGKIYPSSEQALTLHAVFKDGHEVAGESSIAKYQGMIDHVYVTNTYNDQ
HHHHHHHHHHHHCCCCCCCCCCEEEHHHHHCCHHHCCCHHHHHHHCCHHEEEEECCCCCC
KPQASRKVVEAILESDMIVLGPGSLFTSILPNLVIPEIKEALRQTKAEVVYICNIMTQYG
CCHHHHHHHHHHHHCCEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
ETEQFSDADHVAVLNQHLGRDLIDTVLVNVAKVPQAYMNSNKFDEYLVQVDHDFAGLCRA
CCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHH
AKRVISSYFLRLENGGAFHDGNLVVEELMNLVRIVKQ
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12122206; 12799345