Click here to switch to the map view.

The map label for this gene is kdgK [H]

Identifier: 21909986

GI number: 21909986

Start: 493653

End: 494654

Strand: Direct

Name: kdgK [H]

Synonym: SpyM3_0450

Alternate gene names: 21909986

Gene position: 493653-494654 (Clockwise)

Preceding gene: 21909985

Following gene: 21909987

Centisome position: 25.97

GC content: 43.31

Gene sequence:

>1002_bases
ATGTTTAAGTTATTATTGGTTGGTGAACCGCTGATTCGCGTTAGCCCCAATCAGTTTCAGCCTTTAACCAATGCCTGCGA
CGCTCAGCTTTTTTTTGGCGGTTCAGAAGTTAATATTGCAAGAACTCTAGGCGGTTTTGGCTTAGAAACAAGGCTATTTA
CGGCCCTACCAGATAATTCTGTTGGTCACGCTTTTCATCAGTTTTTGAAGCAAATCGGTGTGGATATGACCTTGACGGCT
TGGCAAGGCAACCGTGTTGGGTTGTATTACCTTGAAAATGGCTTTGGCTGTCGGGCTAGTCAGGTTTATTATGACCGCTG
TGGCTCTAGCTTTTCGGCCTTAGATAAGGATAGTCTTGATTTAGCTGCCATTTTTGAAGGCATTCGTCACTTTCATTTTA
GTGGGATCAGTTTGGCGCTGGGCAAAAAAACTCAGGATCTGATTGAGATACTAGCGAGAGAAGCTAGGAAAAGGCAAGTT
TGTGTTTCTTTTGATCTTAACTTTAGATCTAATATGATTGCGGTAGCTGATGCTAAACGACTCTTTTCTCACTTTGCTCA
ATACGCGGATATTATTTTTGGCATGGAACCTTTGCTGTTAGACAGTGACGATTTTGACATGTTTGATAGGAATAAGGCAG
ATGCTACGATGATTAGAGAACGTCTGGCAGGACTTTATCAGCGCTATCAGTTACAAGCTATTTACCATACGGAGCGTTCA
AATGATGCCCAAGGCAGTAATCGTTTCAAGGCTTATGCCTATGATGGGCAGTTTTACGAATCCTGTGAAGTGACGACCCC
AGTCTTGCAACGGGTTGGAAGTGGAGATGCTTTTGTGGCGGGTTTACTTTATCAGTTGTTAGAAGGTAACGAAAAGCAGC
GCAACCTTGATTTTGCTGTGGCAACAGCTAGCCTAAAATGTACAGTAGCTGAAGATCAGCTCTATCACAGCGTCCAACAA
GTAGAAGCAGTCTTAGCTAATCAACGAGATGTCCAGAGGTGA

Upstream 100 bases:

>100_bases
AAAGAGTACTTCTTTGCCAATGCGGAGCCGTCAGAATTAGTTACTTATTTGAAATCAGTACTTGAACAGTAATTCCATTT
TGACGAGGAAAGGAGGTCAC

Downstream 100 bases:

>100_bases
TGATATGGGAAAAATAGAAATCTTAACCAAACTTAAGGCTAATCGGCTTGTCCTGGTTGTACGAGGAGAGTCTAGTGAGG
AAGCTTTAGCTTGCAGCCTG

Product: 2-dehydro-3-deoxygluconokinase

Products: NA

Alternate protein names: 2-deoxy-5-keto-D-gluconate kinase; DKG kinase [H]

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MFKLLLVGEPLIRVSPNQFQPLTNACDAQLFFGGSEVNIARTLGGFGLETRLFTALPDNSVGHAFHQFLKQIGVDMTLTA
WQGNRVGLYYLENGFGCRASQVYYDRCGSSFSALDKDSLDLAAIFEGIRHFHFSGISLALGKKTQDLIEILAREARKRQV
CVSFDLNFRSNMIAVADAKRLFSHFAQYADIIFGMEPLLLDSDDFDMFDRNKADATMIRERLAGLYQRYQLQAIYHTERS
NDAQGSNRFKAYAYDGQFYESCEVTTPVLQRVGSGDAFVAGLLYQLLEGNEKQRNLDFAVATASLKCTVAEDQLYHSVQQ
VEAVLANQRDVQR

Sequences:

>Translated_333_residues
MFKLLLVGEPLIRVSPNQFQPLTNACDAQLFFGGSEVNIARTLGGFGLETRLFTALPDNSVGHAFHQFLKQIGVDMTLTA
WQGNRVGLYYLENGFGCRASQVYYDRCGSSFSALDKDSLDLAAIFEGIRHFHFSGISLALGKKTQDLIEILAREARKRQV
CVSFDLNFRSNMIAVADAKRLFSHFAQYADIIFGMEPLLLDSDDFDMFDRNKADATMIRERLAGLYQRYQLQAIYHTERS
NDAQGSNRFKAYAYDGQFYESCEVTTPVLQRVGSGDAFVAGLLYQLLEGNEKQRNLDFAVATASLKCTVAEDQLYHSVQQ
VEAVLANQRDVQR
>Mature_333_residues
MFKLLLVGEPLIRVSPNQFQPLTNACDAQLFFGGSEVNIARTLGGFGLETRLFTALPDNSVGHAFHQFLKQIGVDMTLTA
WQGNRVGLYYLENGFGCRASQVYYDRCGSSFSALDKDSLDLAAIFEGIRHFHFSGISLALGKKTQDLIEILAREARKRQV
CVSFDLNFRSNMIAVADAKRLFSHFAQYADIIFGMEPLLLDSDDFDMFDRNKADATMIRERLAGLYQRYQLQAIYHTERS
NDAQGSNRFKAYAYDGQFYESCEVTTPVLQRVGSGDAFVAGLLYQLLEGNEKQRNLDFAVATASLKCTVAEDQLYHSVQQ
VEAVLANQRDVQR

Specific function: Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D- gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5- dehydro-2-deoxy-D-gluconate (DKGP) [H]

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173
- InterPro:   IPR022841 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: =2.7.1.92 [H]

Molecular weight: Translated: 37435; Mature: 37435

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKLLLVGEPLIRVSPNQFQPLTNACDAQLFFGGSEVNIARTLGGFGLETRLFTALPDNS
CEEEEEECCCCEEECCCCCCCHHHCCCCEEEECCCCEEHHHHHCCCCCHHEEEEECCCCC
VGHAFHQFLKQIGVDMTLTAWQGNRVGLYYLENGFGCRASQVYYDRCGSSFSALDKDSLD
HHHHHHHHHHHHCCCEEEEEECCCEEEEEEEECCCCCCHHHHHHHHCCCCHHHCCCCCCH
LAAIFEGIRHFHFSGISLALGKKTQDLIEILAREARKRQVCVSFDLNFRSNMIAVADAKR
HHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCEEEEEEECCCCCCEEEEHHHHH
LFSHFAQYADIIFGMEPLLLDSDDFDMFDRNKADATMIRERLAGLYQRYQLQAIYHTERS
HHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCC
NDAQGSNRFKAYAYDGQFYESCEVTTPVLQRVGSGDAFVAGLLYQLLEGNEKQRNLDFAV
CCCCCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEEE
ATASLKCTVAEDQLYHSVQQVEAVLANQRDVQR
EEEEEEEEEEHHHHHHHHHHHHHHHHCHHCCCC
>Mature Secondary Structure
MFKLLLVGEPLIRVSPNQFQPLTNACDAQLFFGGSEVNIARTLGGFGLETRLFTALPDNS
CEEEEEECCCCEEECCCCCCCHHHCCCCEEEECCCCEEHHHHHCCCCCHHEEEEECCCCC
VGHAFHQFLKQIGVDMTLTAWQGNRVGLYYLENGFGCRASQVYYDRCGSSFSALDKDSLD
HHHHHHHHHHHHCCCEEEEEECCCEEEEEEEECCCCCCHHHHHHHHCCCCHHHCCCCCCH
LAAIFEGIRHFHFSGISLALGKKTQDLIEILAREARKRQVCVSFDLNFRSNMIAVADAKR
HHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCEEEEEEECCCCCCEEEEHHHHH
LFSHFAQYADIIFGMEPLLLDSDDFDMFDRNKADATMIRERLAGLYQRYQLQAIYHTERS
HHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCC
NDAQGSNRFKAYAYDGQFYESCEVTTPVLQRVGSGDAFVAGLLYQLLEGNEKQRNLDFAV
CCCCCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEEE
ATASLKCTVAEDQLYHSVQQVEAVLANQRDVQR
EEEEEEEEEEHHHHHHHHHHHHHHHHCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA