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The map label for this gene is rsmI [H]

Identifier: 21909828

GI number: 21909828

Start: 329409

End: 330272

Strand: Direct

Name: rsmI [H]

Synonym: SpyM3_0292

Alternate gene names: 21909828

Gene position: 329409-330272 (Clockwise)

Preceding gene: 21909827

Following gene: 21909829

Centisome position: 17.33

GC content: 42.25

Gene sequence:

>864_bases
ATGCAGGTTCAAAAAAGTTTTAAAGACAAAAAAACAAGCGGAACCTTGTATTTGGTTCCAACCCCAATTGGCAATCTGCA
GGACATGACCTTTAGAGCAGTGGCAACGTTAAAAGAGGTTGATTTTATTTGTGCAGAAGACACAAGAAACACAGGTCTTT
TGCTAAAACACTTTGACATTGCTACCAAGCAAATCAGCTTTCATGAGCACAACGCCTATGAGAAGATTCCTGATTTAATT
GATTTATTAATATCAGGACGGTCACTAGCTCAGGTGTCTGATGCAGGAATGCCATCGATTTCTGATCCTGGGCATGATTT
GGTCAAGGCTGCTATTGATAGTGATATCACAGTCGTTGCTTTACCAGGTGCCTCAGCAGGGATTACAGCTTTGATTGCTA
GTGGACTGGCTCCTCAACCCCATGTTTTTTATGGGTTTTTACCCAGAAAAGCAGGGCAACAAAAGGCTTTCTTTGAGGAC
AAACACCATTACCCAGAGACACAAATGTTTTATGAATCACCCTATCGCATCAAAGATACCCTGACCAATATGTTGGCTTG
TTATGGTGATCGTCAAGTGGTGCTTGTCAGAGAATTAACCAAGCTTTTTGAGGAGTACCAACGGGGGTCGATTTCAGAAA
TCTTGTCCTACCTTGAGGAAACATCCCTAAAAGGGGAGTGTCTGCTGATTGTGGCTGGAGCCCAAGTAGACAGTGAGGTT
GAGCTGACAGCTGATGTTGACTTAGTGTCTCTAGTGCAAAAAGAAATCCAAGCAGGAGCCAAGCCAAATCAGGCTATTAA
AACAATTGCTAAAGCTTACCAGGTAAATCGCCAAGAGCTTTACCAACAATTTCATGACTTATAA

Upstream 100 bases:

>100_bases
GATGAAGGGTTTCATATCTGCAATTTTTTTTATGGACAACGTCGTGAAAATGATGAAGAATGTATGTTTTGCAGAGAATT
ATTAGATAGAAAGTAAGGGC

Downstream 100 bases:

>100_bases
GTCATCGTAGATTAGGAGAAAAACAAATGACAGAAGATCAAGCAACTATCCTTATTTTAGGAGTATACGGAATCATATTG
GCTGTATTCTTATTATCAGC

Product: putative tetrapyrrole methylase family protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MQVQKSFKDKKTSGTLYLVPTPIGNLQDMTFRAVATLKEVDFICAEDTRNTGLLLKHFDIATKQISFHEHNAYEKIPDLI
DLLISGRSLAQVSDAGMPSISDPGHDLVKAAIDSDITVVALPGASAGITALIASGLAPQPHVFYGFLPRKAGQQKAFFED
KHHYPETQMFYESPYRIKDTLTNMLACYGDRQVVLVRELTKLFEEYQRGSISEILSYLEETSLKGECLLIVAGAQVDSEV
ELTADVDLVSLVQKEIQAGAKPNQAIKTIAKAYQVNRQELYQQFHDL

Sequences:

>Translated_287_residues
MQVQKSFKDKKTSGTLYLVPTPIGNLQDMTFRAVATLKEVDFICAEDTRNTGLLLKHFDIATKQISFHEHNAYEKIPDLI
DLLISGRSLAQVSDAGMPSISDPGHDLVKAAIDSDITVVALPGASAGITALIASGLAPQPHVFYGFLPRKAGQQKAFFED
KHHYPETQMFYESPYRIKDTLTNMLACYGDRQVVLVRELTKLFEEYQRGSISEILSYLEETSLKGECLLIVAGAQVDSEV
ELTADVDLVSLVQKEIQAGAKPNQAIKTIAKAYQVNRQELYQQFHDL
>Mature_287_residues
MQVQKSFKDKKTSGTLYLVPTPIGNLQDMTFRAVATLKEVDFICAEDTRNTGLLLKHFDIATKQISFHEHNAYEKIPDLI
DLLISGRSLAQVSDAGMPSISDPGHDLVKAAIDSDITVVALPGASAGITALIASGLAPQPHVFYGFLPRKAGQQKAFFED
KHHYPETQMFYESPYRIKDTLTNMLACYGDRQVVLVRELTKLFEEYQRGSISEILSYLEETSLKGECLLIVAGAQVDSEV
ELTADVDLVSLVQKEIQAGAKPNQAIKTIAKAYQVNRQELYQQFHDL

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=250, Percent_Identity=43.6, Blast_Score=195, Evalue=3e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 31867; Mature: 31867

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVQKSFKDKKTSGTLYLVPTPIGNLQDMTFRAVATLKEVDFICAEDTRNTGLLLKHFDI
CCCCHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEEHH
ATKQISFHEHNAYEKIPDLIDLLISGRSLAQVSDAGMPSISDPGHDLVKAAIDSDITVVA
HHHEECCHHCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEE
LPGASAGITALIASGLAPQPHVFYGFLPRKAGQQKAFFEDKHHYPETQMFYESPYRIKDT
ECCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHCCCCCHHHHHCCCCHHHHH
LTNMLACYGDRQVVLVRELTKLFEEYQRGSISEILSYLEETSLKGECLLIVAGAQVDSEV
HHHHHHHCCCCEEEHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCE
ELTADVDLVSLVQKEIQAGAKPNQAIKTIAKAYQVNRQELYQQFHDL
EEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHCC
>Mature Secondary Structure
MQVQKSFKDKKTSGTLYLVPTPIGNLQDMTFRAVATLKEVDFICAEDTRNTGLLLKHFDI
CCCCHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEEHH
ATKQISFHEHNAYEKIPDLIDLLISGRSLAQVSDAGMPSISDPGHDLVKAAIDSDITVVA
HHHEECCHHCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEE
LPGASAGITALIASGLAPQPHVFYGFLPRKAGQQKAFFEDKHHYPETQMFYESPYRIKDT
ECCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHCCCCCHHHHHCCCCHHHHH
LTNMLACYGDRQVVLVRELTKLFEEYQRGSISEILSYLEETSLKGECLLIVAGAQVDSEV
HHHHHHHCCCCEEEHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCE
ELTADVDLVSLVQKEIQAGAKPNQAIKTIAKAYQVNRQELYQQFHDL
EEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11296296 [H]