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The map label for this gene is ytqB [H]

Identifier: 21909811

GI number: 21909811

Start: 312340

End: 312894

Strand: Direct

Name: ytqB [H]

Synonym: SpyM3_0275

Alternate gene names: 21909811

Gene position: 312340-312894 (Clockwise)

Preceding gene: 21909810

Following gene: 21909812

Centisome position: 16.43

GC content: 40.54

Gene sequence:

>555_bases
ATGCTAAAACGCCCCATTCATCTCTCGCATGATTTTTTAGCGGAGGTTGTGGATAAGTCTAGTGTGGTTGTTGATGCCAC
GATGGGTAATGGAAATGATACTGCCTTTTTGGCACAATTAGCTAAAAAGGTTTATGCTTTTGATGTGCAAGAACAAGCTA
TTAGAAAAACAAGTGAGCGGTTAGCGCAGCTAGGATTATCGAACGCTGAGCTGATTTTAGCGGGTCATGAAGCGGTTGAT
CAGTATGTGACAGAGCCGGTGCGCGCAGCGATTTTTAACCTTGGTTATTTGCCCAGCGCAGATAAATCTATTATTACCTT
ACCAAATACCACACTCCAAGCTTTATCAAAACTACTAACGTTATTAATGGTAGGTGGGCGTATTGCTATTATGGTCTATT
ATGGGCATGATGGAGGCAGTTTGGAAAAAGATGCTTTATTAGATTTTGTCAAGCAATTAGACCAAAGAAAGGTTTCTGCA
ATGCTTTATCAGCCTCTTAATCAGGTGAATACCCCACCTTTTTTAATCATGTTGGAGAAATTAGCAGACGTTTAG

Upstream 100 bases:

>100_bases
TGAATGCCATTGATAAAGAAATGGAAAGACGAGGAAGCTTTCAGGGCTGTAAAGTTGACTAATTTGTCTCATTTTGACGG
ATTTGGATAGGAGAAAAGTG

Downstream 100 bases:

>100_bases
CCCTTATCCCTGTGTCAAGTCTACTAGAAGTTCTGCGATTATTTCGGTGGAAAAAGAAGAAATCCCATAGGCTTTGGCTA
TAAATGTGATATAATGAAGT

Product: SAM-dependent methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MLKRPIHLSHDFLAEVVDKSSVVVDATMGNGNDTAFLAQLAKKVYAFDVQEQAIRKTSERLAQLGLSNAELILAGHEAVD
QYVTEPVRAAIFNLGYLPSADKSIITLPNTTLQALSKLLTLLMVGGRIAIMVYYGHDGGSLEKDALLDFVKQLDQRKVSA
MLYQPLNQVNTPPFLIMLEKLADV

Sequences:

>Translated_184_residues
MLKRPIHLSHDFLAEVVDKSSVVVDATMGNGNDTAFLAQLAKKVYAFDVQEQAIRKTSERLAQLGLSNAELILAGHEAVD
QYVTEPVRAAIFNLGYLPSADKSIITLPNTTLQALSKLLTLLMVGGRIAIMVYYGHDGGSLEKDALLDFVKQLDQRKVSA
MLYQPLNQVNTPPFLIMLEKLADV
>Mature_184_residues
MLKRPIHLSHDFLAEVVDKSSVVVDATMGNGNDTAFLAQLAKKVYAFDVQEQAIRKTSERLAQLGLSNAELILAGHEAVD
QYVTEPVRAAIFNLGYLPSADKSIITLPNTTLQALSKLLTLLMVGGRIAIMVYYGHDGGSLEKDALLDFVKQLDQRKVSA
MLYQPLNQVNTPPFLIMLEKLADV

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010719 [H]

Pfam domain/function: PF06962 rRNA_methylase [H]

EC number: NA

Molecular weight: Translated: 20212; Mature: 20212

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKRPIHLSHDFLAEVVDKSSVVVDATMGNGNDTAFLAQLAKKVYAFDVQEQAIRKTSER
CCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHH
LAQLGLSNAELILAGHEAVDQYVTEPVRAAIFNLGYLPSADKSIITLPNTTLQALSKLLT
HHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHH
LLMVGGRIAIMVYYGHDGGSLEKDALLDFVKQLDQRKVSAMLYQPLNQVNTPPFLIMLEK
HHHHCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LADV
HHCC
>Mature Secondary Structure
MLKRPIHLSHDFLAEVVDKSSVVVDATMGNGNDTAFLAQLAKKVYAFDVQEQAIRKTSER
CCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHH
LAQLGLSNAELILAGHEAVDQYVTEPVRAAIFNLGYLPSADKSIITLPNTTLQALSKLLT
HHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHH
LLMVGGRIAIMVYYGHDGGSLEKDALLDFVKQLDQRKVSAMLYQPLNQVNTPPFLIMLEK
HHHHCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LADV
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]