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The map label for this gene is ybhL [C]

Identifier: 21909796

GI number: 21909796

Start: 301715

End: 302404

Strand: Direct

Name: ybhL [C]

Synonym: SpyM3_0260

Alternate gene names: 21909796

Gene position: 301715-302404 (Clockwise)

Preceding gene: 21909795

Following gene: 21909797

Centisome position: 15.88

GC content: 36.81

Gene sequence:

>690_bases
ATGAACGATCACGTTATTTATACACAATCAGATGTGGGATTAAATCAGTTTTTTGCTAAAATTTATAGTCTAGTGGGAAT
GGGAGTGGGTTTGTCTGCTTTTGTTTCTTATTTGATGCTTTATCCATTTAGAGAAAATTTAATCTCTATCCTTGTTAATC
AGCCGATGATTTACTATGGTGCTGCGATTATTGAACTTATTTTAGTTTTTGTAGCAAGTGGTGCAGCACGAAAAAACACA
CCAGCTGCATTGCCCATTTTTCTTATCTATGCTGCGCTAAATGGCTTTACCCTAAGCTTTATTATTGTGGCATACGCTCA
AACGACAGTTTTTCAAGCATTTCTTTCTTCAGCAGCTGTGTTTTTTGCCATGTCAATCATTGGTGTCAAGACTAAACGGG
ATATGTCAGGTCTTAGAAAGGCTATGTTTGCTGCTTTGATTGGTGTTGTTGTGGCTAGTCTGATTAATCTTTTTATTGGT
AGTGGGATGATGAGTTATGTCATTAGTGTGATTTCCGTGCTAATTTTCTCAGGTCTCATCGCATCGGATAATCAAATGAT
TAAGCGCGTTTATCAAGCAACAAATGGCCAGGTTGGTGATGGCTGGGCTGTTGCTATGGCCTTAAGCTTGTATTTAGATT
TTATTAACTTATTTATCAGCCTTCTTCGTATTTTTGGAAGAAATGATTAA

Upstream 100 bases:

>100_bases
TCAAGGAAGCAGTGACGCCTTTAAGACAAAAATGGTCTAATCGACGGTTTCTTCGCCGCAAGACCCTCCAAAGTCATAAT
CGTTAAGTAAAGGAGTTATT

Downstream 100 bases:

>100_bases
CATTAAAAAGTGAGTATAACTACTCACTTTTTAATGTTAACAGGATAAGTAAACTGTAAGCAAGAAATTCGAGATAGATA
TAAGATGAGGCTGCTAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MNDHVIYTQSDVGLNQFFAKIYSLVGMGVGLSAFVSYLMLYPFRENLISILVNQPMIYYGAAIIELILVFVASGAARKNT
PAALPIFLIYAALNGFTLSFIIVAYAQTTVFQAFLSSAAVFFAMSIIGVKTKRDMSGLRKAMFAALIGVVVASLINLFIG
SGMMSYVISVISVLIFSGLIASDNQMIKRVYQATNGQVGDGWAVAMALSLYLDFINLFISLLRIFGRND

Sequences:

>Translated_229_residues
MNDHVIYTQSDVGLNQFFAKIYSLVGMGVGLSAFVSYLMLYPFRENLISILVNQPMIYYGAAIIELILVFVASGAARKNT
PAALPIFLIYAALNGFTLSFIIVAYAQTTVFQAFLSSAAVFFAMSIIGVKTKRDMSGLRKAMFAALIGVVVASLINLFIG
SGMMSYVISVISVLIFSGLIASDNQMIKRVYQATNGQVGDGWAVAMALSLYLDFINLFISLLRIFGRND
>Mature_229_residues
MNDHVIYTQSDVGLNQFFAKIYSLVGMGVGLSAFVSYLMLYPFRENLISILVNQPMIYYGAAIIELILVFVASGAARKNT
PAALPIFLIYAALNGFTLSFIIVAYAQTTVFQAFLSSAAVFFAMSIIGVKTKRDMSGLRKAMFAALIGVVVASLINLFIG
SGMMSYVISVISVLIFSGLIASDNQMIKRVYQATNGQVGDGWAVAMALSLYLDFINLFISLLRIFGRND

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BI1 family

Homologues:

Organism=Homo sapiens, GI116812579, Length=207, Percent_Identity=27.536231884058, Blast_Score=67, Evalue=1e-11,
Organism=Escherichia coli, GI1787004, Length=234, Percent_Identity=34.6153846153846, Blast_Score=125, Evalue=3e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y260_STRP3 (Q8K8I9)

Other databases:

- EMBL:   AE014074
- EMBL:   BA000034
- RefSeq:   NP_664064.1
- RefSeq:   NP_802861.1
- EnsemblBacteria:   EBSTRT00000033817
- EnsemblBacteria:   EBSTRT00000035413
- GeneID:   1008574
- GeneID:   1065166
- GenomeReviews:   AE014074_GR
- GenomeReviews:   BA000034_GR
- KEGG:   spg:SpyM3_0260
- KEGG:   sps:SPs1599
- GeneTree:   EBGT00050000027955
- HOGENOM:   HBG595196
- OMA:   YTQSDAG
- ProtClustDB:   CLSK877037
- BioCyc:   SPYO193567:SPS1599-MONOMER
- BioCyc:   SPYO198466:SPYM3_0260-MONOMER
- InterPro:   IPR006214
- PANTHER:   PTHR23291

Pfam domain/function: PF01027 UPF0005

EC number: NA

Molecular weight: Translated: 24944; Mature: 24944

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xc895248)-; HASH(0x4064aa64)-; HASH(0xc59a860)-; HASH(0xc2c598c)-; HASH(0xbee754c)-; HASH(0xbb66488)-; HASH(0xc73b61c)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDHVIYTQSDVGLNQFFAKIYSLVGMGVGLSAFVSYLMLYPFRENLISILVNQPMIYYG
CCCCEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
AAIIELILVFVASGAARKNTPAALPIFLIYAALNGFTLSFIIVAYAQTTVFQAFLSSAAV
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
FFAMSIIGVKTKRDMSGLRKAMFAALIGVVVASLINLFIGSGMMSYVISVISVLIFSGLI
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
ASDNQMIKRVYQATNGQVGDGWAVAMALSLYLDFINLFISLLRIFGRND
CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
>Mature Secondary Structure
MNDHVIYTQSDVGLNQFFAKIYSLVGMGVGLSAFVSYLMLYPFRENLISILVNQPMIYYG
CCCCEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
AAIIELILVFVASGAARKNTPAALPIFLIYAALNGFTLSFIIVAYAQTTVFQAFLSSAAV
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
FFAMSIIGVKTKRDMSGLRKAMFAALIGVVVASLINLFIGSGMMSYVISVISVLIFSGLI
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
ASDNQMIKRVYQATNGQVGDGWAVAMALSLYLDFINLFISLLRIFGRND
CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12122206; 12799345