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The map label for this gene is atmB [H]

Identifier: 21909769

GI number: 21909769

Start: 272310

End: 273155

Strand: Direct

Name: atmB [H]

Synonym: SpyM3_0233

Alternate gene names: 21909769

Gene position: 272310-273155 (Clockwise)

Preceding gene: 21909768

Following gene: 21909770

Centisome position: 14.33

GC content: 36.88

Gene sequence:

>846_bases
ATGTCTTTTAAAAAATGGATTGGAATAGTCGGAATCGCTTTAGCATCAACTGTATTGGTTGCATGTTCTGAAAAACAAGA
TGATAAAAACACTCTAACTATTGGGGTGATGACAAAAACAGAATCTGATCAAGCGAGATGGGATAAAGTTGAAGAATTAT
TGAAAAAAGACAATATCACTTTGAAGTACAAAGAATTTACAGATTACTCGCAACCTAATAAGGCAGTTGCTAATGGTGAA
GTCGATATTAATGCCTTCCAACACTATAATTTCTTAAATAACTGGAATAAGGAAAATAAGGAACATTTGGTGGCCATTGC
TGATACCTATATCAGCCCAATTAACCTTTTCTCTGGAACCAGTCAAGATGGGAAGGCTAAATACAAATCAGTAGCTGATC
TGCCAAATGGTGCTCAAATTGCAGTACCAAATGATGCGACCAATGAAAGCCGTGCCCTCTATGTGCTGCAATCAGCTGGC
CTCATTAAATTGGATGTGTCTGGTGATCAATTAGCAACCATTGCCAATATCTCAGAGAACAAAAAGAAATTAGATATCAA
GGAATTAGATGCTAGCCAAACGGCACGTGCTTTAGTATCTGCTGATGCAGCTGTTGTCAATAATAGTTACGCTGTTCCTG
CAAAAATTGACTACAAAACCTCTCTTTTCAAAGAAAAAGCAGATGACAATTCAAAACAGTGGATTAACATTATTGCAGGT
CAAAAAGATTGGGAAAAATCAGAGAAGGCTGATGCTATTAAAAAACTCATCAAGGCCTACCAAACTGATGAGGTGAAGAA
AGTCGTGGAAAAAACTTCAAATGGTATAGATGTATCCGTATGGTAA

Upstream 100 bases:

>100_bases
AGTTTAAAACTATGGTATATGCTAGCCATTATCAATTTGAAAACTATATCTAATTAAGATACAATAATGATCGTAAACAA
AATGAATCGAGGATAACGCT

Downstream 100 bases:

>100_bases
ATTTTAGCCATTGTTATAACAAGAGTGTGGTTGTGTTTAAAACACATGCTTTCTTGCATGCTTGAGGAAGAGTTTACGAT
TAACTTACCTTTAGAAAGCT

Product: ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MSFKKWIGIVGIALASTVLVACSEKQDDKNTLTIGVMTKTESDQARWDKVEELLKKDNITLKYKEFTDYSQPNKAVANGE
VDINAFQHYNFLNNWNKENKEHLVAIADTYISPINLFSGTSQDGKAKYKSVADLPNGAQIAVPNDATNESRALYVLQSAG
LIKLDVSGDQLATIANISENKKKLDIKELDASQTARALVSADAAVVNNSYAVPAKIDYKTSLFKEKADDNSKQWINIIAG
QKDWEKSEKADAIKKLIKAYQTDEVKKVVEKTSNGIDVSVW

Sequences:

>Translated_281_residues
MSFKKWIGIVGIALASTVLVACSEKQDDKNTLTIGVMTKTESDQARWDKVEELLKKDNITLKYKEFTDYSQPNKAVANGE
VDINAFQHYNFLNNWNKENKEHLVAIADTYISPINLFSGTSQDGKAKYKSVADLPNGAQIAVPNDATNESRALYVLQSAG
LIKLDVSGDQLATIANISENKKKLDIKELDASQTARALVSADAAVVNNSYAVPAKIDYKTSLFKEKADDNSKQWINIIAG
QKDWEKSEKADAIKKLIKAYQTDEVKKVVEKTSNGIDVSVW
>Mature_280_residues
SFKKWIGIVGIALASTVLVACSEKQDDKNTLTIGVMTKTESDQARWDKVEELLKKDNITLKYKEFTDYSQPNKAVANGEV
DINAFQHYNFLNNWNKENKEHLVAIADTYISPINLFSGTSQDGKAKYKSVADLPNGAQIAVPNDATNESRALYVLQSAGL
IKLDVSGDQLATIANISENKKKLDIKELDASQTARALVSADAAVVNNSYAVPAKIDYKTSLFKEKADDNSKQWINIIAGQ
KDWEKSEKADAIKKLIKAYQTDEVKKVVEKTSNGIDVSVW

Specific function: This protein is a component of a D-methionine permease, a binding protein-dependent, ATP-driven transport system [H]

COG id: COG1464

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface antigen

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpA lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI1786396, Length=291, Percent_Identity=36.426116838488, Blast_Score=157, Evalue=1e-39,
Organism=Escherichia coli, GI1790093, Length=263, Percent_Identity=31.1787072243346, Blast_Score=122, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004872
- InterPro:   IPR004478 [H]

Pfam domain/function: PF03180 Lipoprotein_9 [H]

EC number: NA

Molecular weight: Translated: 31111; Mature: 30980

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFKKWIGIVGIALASTVLVACSEKQDDKNTLTIGVMTKTESDQARWDKVEELLKKDNIT
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCE
LKYKEFTDYSQPNKAVANGEVDINAFQHYNFLNNWNKENKEHLVAIADTYISPINLFSGT
EEEECCCCCCCCCCEECCCCEEEHHHHHHHHHHCCCCCCCCEEEEEEHHHCCHHHHCCCC
SQDGKAKYKSVADLPNGAQIAVPNDATNESRALYVLQSAGLIKLDVSGDQLATIANISEN
CCCCHHHHHHHHCCCCCCEEEECCCCCCCCEEEEEEECCCEEEEECCCCCEEEEECCCCC
KKKLDIKELDASQTARALVSADAAVVNNSYAVPAKIDYKTSLFKEKADDNSKQWINIIAG
CCCCCHHHCCHHHHHHHHHHCCHHEECCCEECCEEECHHHHHHHHHCCCCCCCEEEEECC
QKDWEKSEKADAIKKLIKAYQTDEVKKVVEKTSNGIDVSVW
CCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCEEEEEC
>Mature Secondary Structure 
SFKKWIGIVGIALASTVLVACSEKQDDKNTLTIGVMTKTESDQARWDKVEELLKKDNIT
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCE
LKYKEFTDYSQPNKAVANGEVDINAFQHYNFLNNWNKENKEHLVAIADTYISPINLFSGT
EEEECCCCCCCCCCEECCCCEEEHHHHHHHHHHCCCCCCCCEEEEEEHHHCCHHHHCCCC
SQDGKAKYKSVADLPNGAQIAVPNDATNESRALYVLQSAGLIKLDVSGDQLATIANISEN
CCCCHHHHHHHHCCCCCCEEEECCCCCCCCEEEEEEECCCEEEEECCCCCEEEEECCCCC
KKKLDIKELDASQTARALVSADAAVVNNSYAVPAKIDYKTSLFKEKADDNSKQWINIIAG
CCCCCHHHCCHHHHHHHHHHCCHHEECCCEECCEEECHHHHHHHHHCCCCCCCEEEEECC
QKDWEKSEKADAIKKLIKAYQTDEVKKVVEKTSNGIDVSVW
CCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]