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The map label for this gene is yesO [H]

Identifier: 21909716

GI number: 21909716

Start: 209431

End: 210489

Strand: Direct

Name: yesO [H]

Synonym: SpyM3_0180

Alternate gene names: 21909716

Gene position: 209431-210489 (Clockwise)

Preceding gene: 21909715

Following gene: 21909717

Centisome position: 11.02

GC content: 39.94

Gene sequence:

>1059_bases
ATGAACATGAAGAAGTTAGCTTCATTAGTGATGCTTGGTGCATCTGTTTTAGGACTAGCAGCTTGTGGCGGAAAGAGCCA
GAAAGAGGCTGGTGCAAGTAAATCTGATACTGCTAAGACAGAAATCACATGGTGGGCTTTCCCGGTCTTCACGCAAGAAA
AAGCTGAAGATGGTGTGGGAACCTATGAGAAGAAATTGATTGCTGCCTTTGAGAAAGCTAATCCAGAAATCAAGGTAAAA
TTGGAAACCATTGATTTTACATCTGGTCCTGAGAAAATCACAACTGCTATTGAAGCTGGAACAGCTCCTGATGTCCTCTT
TGATGCTCCAGGTCGTATCATTCAATATGGTAAAAATGGGAAATTGGCTGACTTGAATGACTTGTTCACAAAAGAGTTTA
CCAAAGATGTTAACAATGACAAATTGATTCAAGCCTCAAAAGCAGGAGATACAGCTTACATGTATCCTATCAGCTCTGCT
CCATTCTACATGGCGTTGAATAAAAAAATGTTCAAAGATGCTGGCGTCCTTGACCTTGTGAAAGAGGGGTGGACAACAGA
TGATTTTGAAAAAGTCTTGAAAGCATTGAAGGACAAAGGATATAACCCAGGTTCTTTCTTTGCTAATGGTCAAGGTGGTG
ACCAAGGACCACGTGCCTTCTTTGCTAACCTTTATAGTAGTCATATTACCGATGACAAAGTAACCAAATACACCACAGAT
GATGCTAACTCTATTAAAGCCATGACTAAAATTTCCAATTGGATTAAAGATGGTTTAATGATGAATGGCTCTCAATACGA
CGGTTCAGCTGATATTCAAAACTTTGCGAATGGCCAAACTTCCTTTACCATTCTTTGGGCGCCTGCACAACCCGGCATCC
AAGCTAAATTGTTAGAAGCTAGTAAAGTGGATTACCTTGAAATCCCATTCCCATCAGATGATGGCAAACCAGAACTAGAA
TACCTCGTAAATGGTTTTGCGGTCTTTAATAACAAAGATGAACAAAAAGTCGCTGCCTCTAAGACATTTATCCAATTTAT
CGCTGATGATAAAGAATAG

Upstream 100 bases:

>100_bases
TACAAGGCCTAAGGAAATTGCAGAGCGTTTTATCGAAGCGCTCAAATCCTAATAGTGGTTGTCAAACTAGAAACACACAT
CAAAAAAAGGAGATTTTACG

Downstream 100 bases:

>100_bases
GGACCTAAAAATGTTGTTCGTACAGGTGCTTTCCCTGTAAGAACTTCTTATGGGGATCTTTACAAAGACAAACGAATGGA
AAAAATTGCTGAATGGACAA

Product: N-acetylneuraminate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MNMKKLASLVMLGASVLGLAACGGKSQKEAGASKSDTAKTEITWWAFPVFTQEKAEDGVGTYEKKLIAAFEKANPEIKVK
LETIDFTSGPEKITTAIEAGTAPDVLFDAPGRIIQYGKNGKLADLNDLFTKEFTKDVNNDKLIQASKAGDTAYMYPISSA
PFYMALNKKMFKDAGVLDLVKEGWTTDDFEKVLKALKDKGYNPGSFFANGQGGDQGPRAFFANLYSSHITDDKVTKYTTD
DANSIKAMTKISNWIKDGLMMNGSQYDGSADIQNFANGQTSFTILWAPAQPGIQAKLLEASKVDYLEIPFPSDDGKPELE
YLVNGFAVFNNKDEQKVAASKTFIQFIADDKE

Sequences:

>Translated_352_residues
MNMKKLASLVMLGASVLGLAACGGKSQKEAGASKSDTAKTEITWWAFPVFTQEKAEDGVGTYEKKLIAAFEKANPEIKVK
LETIDFTSGPEKITTAIEAGTAPDVLFDAPGRIIQYGKNGKLADLNDLFTKEFTKDVNNDKLIQASKAGDTAYMYPISSA
PFYMALNKKMFKDAGVLDLVKEGWTTDDFEKVLKALKDKGYNPGSFFANGQGGDQGPRAFFANLYSSHITDDKVTKYTTD
DANSIKAMTKISNWIKDGLMMNGSQYDGSADIQNFANGQTSFTILWAPAQPGIQAKLLEASKVDYLEIPFPSDDGKPELE
YLVNGFAVFNNKDEQKVAASKTFIQFIADDKE
>Mature_352_residues
MNMKKLASLVMLGASVLGLAACGGKSQKEAGASKSDTAKTEITWWAFPVFTQEKAEDGVGTYEKKLIAAFEKANPEIKVK
LETIDFTSGPEKITTAIEAGTAPDVLFDAPGRIIQYGKNGKLADLNDLFTKEFTKDVNNDKLIQASKAGDTAYMYPISSA
PFYMALNKKMFKDAGVLDLVKEGWTTDDFEKVLKALKDKGYNPGSFFANGQGGDQGPRAFFANLYSSHITDDKVTKYTTD
DANSIKAMTKISNWIKDGLMMNGSQYDGSADIQNFANGQTSFTILWAPAQPGIQAKLLEASKVDYLEIPFPSDDGKPELE
YLVNGFAVFNNKDEQKVAASKTFIQFIADDKE

Specific function: May play role in the degradation of type I rhamnogalacturonan derived from plant cell walls [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 38453; Mature: 38453

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMKKLASLVMLGASVLGLAACGGKSQKEAGASKSDTAKTEITWWAFPVFTQEKAEDGVG
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCEEEEEEEEEEEEHHHHCCCCC
TYEKKLIAAFEKANPEIKVKLETIDFTSGPEKITTAIEAGTAPDVLFDAPGRIIQYGKNG
HHHHHHHHHHHHCCCEEEEEEEEEECCCCHHHHHHHHHCCCCCCEEECCCCCEEEECCCC
KLADLNDLFTKEFTKDVNNDKLIQASKAGDTAYMYPISSAPFYMALNKKMFKDAGVLDLV
CCCCHHHHHHHHHHHCCCCCCEEEECCCCCEEEEEECCCCCEEEEHHHHHHHCCCHHHHH
KEGWTTDDFEKVLKALKDKGYNPGSFFANGQGGDQGPRAFFANLYSSHITDDKVTKYTTD
HCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEECC
DANSIKAMTKISNWIKDGLMMNGSQYDGSADIQNFANGQTSFTILWAPAQPGIQAKLLEA
CHHHHHHHHHHHHHHHHCEEECCCCCCCCCHHHHHCCCCEEEEEEECCCCCCCCEEEECC
SKVDYLEIPFPSDDGKPELEYLVNGFAVFNNKDEQKVAASKTFIQFIADDKE
CCCCEEECCCCCCCCCHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNMKKLASLVMLGASVLGLAACGGKSQKEAGASKSDTAKTEITWWAFPVFTQEKAEDGVG
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCEEEEEEEEEEEEHHHHCCCCC
TYEKKLIAAFEKANPEIKVKLETIDFTSGPEKITTAIEAGTAPDVLFDAPGRIIQYGKNG
HHHHHHHHHHHHCCCEEEEEEEEEECCCCHHHHHHHHHCCCCCCEEECCCCCEEEECCCC
KLADLNDLFTKEFTKDVNNDKLIQASKAGDTAYMYPISSAPFYMALNKKMFKDAGVLDLV
CCCCHHHHHHHHHHHCCCCCCEEEECCCCCEEEEEECCCCCEEEEHHHHHHHCCCHHHHH
KEGWTTDDFEKVLKALKDKGYNPGSFFANGQGGDQGPRAFFANLYSSHITDDKVTKYTTD
HCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEECC
DANSIKAMTKISNWIKDGLMMNGSQYDGSADIQNFANGQTSFTILWAPAQPGIQAKLLEA
CHHHHHHHHHHHHHHHHCEEECCCCCCCCCHHHHHCCCCEEEEEEECCCCCCCCEEEECC
SKVDYLEIPFPSDDGKPELEYLVNGFAVFNNKDEQKVAASKTFIQFIADDKE
CCCCEEECCCCCCCCCHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]