Click here to switch to the map view.

The map label for this gene is ntpC [H]

Identifier: 21909654

GI number: 21909654

Start: 139548

End: 140546

Strand: Direct

Name: ntpC [H]

Synonym: SpyM3_0118

Alternate gene names: 21909654

Gene position: 139548-140546 (Clockwise)

Preceding gene: 21909653

Following gene: 21909655

Centisome position: 7.34

GC content: 38.64

Gene sequence:

>999_bases
ATGCCAACATTTCTAGAATTAAACACTACTATCAGTGTCAAAGAAAAAGAGTTATTGACTAAAGAGCAATTTGATAAGCT
ATTGCAGGCTCCCAATACAACAACCTTAGCTCGACTGTTGCACCAGTCAGTCTATCACCTAACTGTTGACGATCTCAACG
ATTTGGATCGGCTAGAATCTATCTTAATGGCTGAGCTAACCAAGACCTATCGCTGGGCTTTTGCAGAAACCCCTCAACCT
GACATAGTACAATTATTTACCTTGCGTTACACCTATCATAATGTCAAAGTGTTGTTAAAAGCTAAAGCTAGTCAAGCAGA
TCTGAGTCACTTATTACTACCAATTGGTGACAAGCCTTTGGTGGCTTTGGAATATTTGATTAGGACGATGACTTCTGATG
AGTTTCCAAAAGAGGTGGTAACAGAAATCCAGTCCATTTGGGCCGAATATCAAGATTATCAAGACATACGCGTCTTAGAA
ATTGGTACTGACTTAGCTTATTTTAAGGCGTTGAAACAAATAGCACAAAGATTAGAGGACCCTGTTTTCCAACAAGCTGT
TCTTATTGTGATTGATTTGTATAATCTGATTACCGTCAGACGGGCCAAGTCGCAAAATAAACCAATAAGTTTCATGATGC
AGTTATTATCTGATGAAGCAAGTAGACCAAGTAAAACATTTATCACACTTGAAGATGATAAGGATCTGATGACGTGGTTT
GAAAATGTAACACCTGATAGCTATATGACAGCCCTAAAACCTTATTCAGAGAAACTTCGCCAAGGCACTCTTCAAACGAC
TGAGTTAGAATACCTTGTTGATGAATGCCTTTACCATTTATTTGCGAAGGCCAAATATCAAGTCGATGGACCTTATGTAC
TTGCTCGGTTTTTGCTCGCTAAATCGTTTGAAGTAAAAAATCTACGGCTTTTAGCGGCTGCTTTAGCTAATGATTTACCC
AAAGAACGTGTCATAGAAAGGATGAGACCAATAGCATGA

Upstream 100 bases:

>100_bases
CAATTATTTATACCGTTACCTTTTAGAATCAGTTGTTAAAGAAGAAAGCTCCCGCATCATTGATAGGCTTTTTTCAGAGA
TATAGGAGGTTTGACTAGCG

Downstream 100 bases:

>100_bases
CCAAAACATTGTATAAAGTCGGGGTAATTGGTAACAGAGATGTTATTCTACCTTTTCAGATGATTGGGTTTCAAACTTTT
CCAGTAATAAAACCACAAGA

Product: putative V-type Na+ -ATPase subunit C

Products: ADP; phosphate; H+

Alternate protein names: Na(+)-translocating ATPase subunit C; V-type sodium pump subunit C [H]

Number of amino acids: Translated: 332; Mature: 331

Protein sequence:

>332_residues
MPTFLELNTTISVKEKELLTKEQFDKLLQAPNTTTLARLLHQSVYHLTVDDLNDLDRLESILMAELTKTYRWAFAETPQP
DIVQLFTLRYTYHNVKVLLKAKASQADLSHLLLPIGDKPLVALEYLIRTMTSDEFPKEVVTEIQSIWAEYQDYQDIRVLE
IGTDLAYFKALKQIAQRLEDPVFQQAVLIVIDLYNLITVRRAKSQNKPISFMMQLLSDEASRPSKTFITLEDDKDLMTWF
ENVTPDSYMTALKPYSEKLRQGTLQTTELEYLVDECLYHLFAKAKYQVDGPYVLARFLLAKSFEVKNLRLLAAALANDLP
KERVIERMRPIA

Sequences:

>Translated_332_residues
MPTFLELNTTISVKEKELLTKEQFDKLLQAPNTTTLARLLHQSVYHLTVDDLNDLDRLESILMAELTKTYRWAFAETPQP
DIVQLFTLRYTYHNVKVLLKAKASQADLSHLLLPIGDKPLVALEYLIRTMTSDEFPKEVVTEIQSIWAEYQDYQDIRVLE
IGTDLAYFKALKQIAQRLEDPVFQQAVLIVIDLYNLITVRRAKSQNKPISFMMQLLSDEASRPSKTFITLEDDKDLMTWF
ENVTPDSYMTALKPYSEKLRQGTLQTTELEYLVDECLYHLFAKAKYQVDGPYVLARFLLAKSFEVKNLRLLAAALANDLP
KERVIERMRPIA
>Mature_331_residues
PTFLELNTTISVKEKELLTKEQFDKLLQAPNTTTLARLLHQSVYHLTVDDLNDLDRLESILMAELTKTYRWAFAETPQPD
IVQLFTLRYTYHNVKVLLKAKASQADLSHLLLPIGDKPLVALEYLIRTMTSDEFPKEVVTEIQSIWAEYQDYQDIRVLEI
GTDLAYFKALKQIAQRLEDPVFQQAVLIVIDLYNLITVRRAKSQNKPISFMMQLLSDEASRPSKTFITLEDDKDLMTWFE
NVTPDSYMTALKPYSEKLRQGTLQTTELEYLVDECLYHLFAKAKYQVDGPYVLARFLLAKSFEVKNLRLLAAALANDLPK
ERVIERMRPIA

Specific function: Involved in ATP-driven sodium extrusion [H]

COG id: COG1527

COG function: function code C; Archaeal/vacuolar-type H+-ATPase subunit C

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the V-ATPase V0D/AC39 subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014272
- InterPro:   IPR002843 [H]

Pfam domain/function: PF01992 vATP-synt_AC39 [H]

EC number: 3.6.3.14

Molecular weight: Translated: 38446; Mature: 38315

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTFLELNTTISVKEKELLTKEQFDKLLQAPNTTTLARLLHQSVYHLTVDDLNDLDRLES
CCCEEEECCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEHHCHHHHHHHHH
ILMAELTKTYRWAFAETPQPDIVQLFTLRYTYHNVKVLLKAKASQADLSHLLLPIGDKPL
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHCCCCCHH
VALEYLIRTMTSDEFPKEVVTEIQSIWAEYQDYQDIRVLEIGTDLAYFKALKQIAQRLED
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHC
PVFQQAVLIVIDLYNLITVRRAKSQNKPISFMMQLLSDEASRPSKTFITLEDDKDLMTWF
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHH
ENVTPDSYMTALKPYSEKLRQGTLQTTELEYLVDECLYHLFAKAKYQVDGPYVLARFLLA
HHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
KSFEVKNLRLLAAALANDLPKERVIERMRPIA
HCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCC
>Mature Secondary Structure 
PTFLELNTTISVKEKELLTKEQFDKLLQAPNTTTLARLLHQSVYHLTVDDLNDLDRLES
CCEEEECCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEHHCHHHHHHHHH
ILMAELTKTYRWAFAETPQPDIVQLFTLRYTYHNVKVLLKAKASQADLSHLLLPIGDKPL
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHCCCCCHH
VALEYLIRTMTSDEFPKEVVTEIQSIWAEYQDYQDIRVLEIGTDLAYFKALKQIAQRLED
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHC
PVFQQAVLIVIDLYNLITVRRAKSQNKPISFMMQLLSDEASRPSKTFITLEDDKDLMTWF
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHH
ENVTPDSYMTALKPYSEKLRQGTLQTTELEYLVDECLYHLFAKAKYQVDGPYVLARFLLA
HHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
KSFEVKNLRLLAAALANDLPKERVIERMRPIA
HCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8157629; 8144530 [H]