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The map label for this gene is nra

Identifier: 21909633

GI number: 21909633

Start: 115764

End: 117299

Strand: Reverse

Name: nra

Synonym: SpyM3_0097

Alternate gene names: NA

Gene position: 117299-115764 (Counterclockwise)

Preceding gene: 21909639

Following gene: 21909632

Centisome position: 6.17

GC content: 31.97

Gene sequence:

>1536_bases
ATGCCTTATGTCAAAAAGAAAAAGGATAGTTTCTTAGTAGAAACATATCTTGAACAGTCTATTAGAGATAAAAGTGAATT
AGTCTTACTGTTATTTAAATCGCCTACTATCATTTTTTCTCATGTTGCTAAACAAACTGGTCTGACGGCTGTACAATTAA
AATATTACTGTAAAGAACTTGATGACTTTTTTGGAAATAATTTAGATATTACCATTAAAAAGGGCAAAATAATATGTTGT
TTTGTCAAACCTGTTAAGGAATTCTACCTTCATCAACTCTATGACACATCAACAATATTAAAATTATTAGTTTTCTTTAT
TAAAAATGGAACATCATCACAACCTCTGATTAAATTTTCAAAAAAGTATTTTCTATCAAGCTCCTCAGCTTATCGGCTAC
GGGAATCGCTGATCAAATTACTACGGGAATTTGGCTTGAGAGTCTCAAAAAATACAATTGTCGGAGAGGAATATCGTATT
CGCTATCTTATTGCCATGCTATATAGTAAATTTGGCATTGTCATCTATCCGTTAGATCATCTAGACAATCAAATTATTTA
TCGCTTCTTATCACAAAGTGCAACCAATTTAAGAACATCGCCCTGGCTAGAGGAACCTTTTTCTTTTTACAATATGTTAC
TTGCCTTGTCATGGAAGCGCCACCAATTTGCAGTTAGCATTCCTCAAACACGTATTTTTCGACAATTAAAAAAGCTTTTT
ATCTATGATTGTTTAACTCGAAGCAGTCGACAAGTAATCGAAAATGCTTTTTCGTTAACGTTCTCACAAGGAGATCTCGA
GTATCTTTTCTTAATTTATATTACCACCAATAATTCCTTTGCCAGCCTACAATGGACTCCACAGCATATTGAAACTTGCT
GCCATATTTTTGAAAAAAATGACACATTTCGGTTATTGTTAGAGCCCATTCTTAAACGTCTACCGCAATTAAACCATTCT
AAACAAGACCTTATTAAAGCCCTTATGTATTTTTCAAAATCTTTTCTATTTAACCTCCAACATTTCGTCATCGAGATTCC
TTCTTTTTCCTTGCCGACCTATACAGGCAACTCTAATCTTTACAAAGCTTTAAAAAATATTGTAAATCAGTGGCTTGCTC
AATTACCCGGAAAGCGTCATCTTAACGAAAAGCATCTCCAACTTTTTTGCTCTCATATTGAACAAATCTTAAAAAATAAA
CAACCTGCTTTAACTGTCGTTTTAATATCTAGTAACTTTATAAATGCTAAACTCCTTACAGATACTATCCCACGATATTT
TTCTGATAAAGGAATTCATTTTTATTCTTTTTACTTATTAAGAGATGATATCTATCAAATTCCAAGCTTAAAACCAGATT
TAGTTATCACTCATAGCCGATTAATTCCTTTTGTTAAGAATGATCTGGTCAAAGGTGTTACTGTTGCTGAATTTTCTTTT
GATAACCCTGACTACTCTATTGCTTCAATTCAAAACTTGATATATCAGCTCAAAGATAAAAAGTATCAAGATTTTCTAAA
CGAGCAATTACAATAA

Upstream 100 bases:

>100_bases
GCTTCTAAACTTATTGTTAAATTAGTTTCTTAAATTGCTTTATTTTATAAGCTTAGATAAAATTTTATTGTAGACTAGAA
GTTTAGGAGAGAGCTATTAC

Downstream 100 bases:

>100_bases
ATAACTGACTTTCGTTTATTTTTAGGTATCTGTTATTCATTTAACCTGATTCTGTTGTATGTGCTTCTACATTTCTCAGT
TACTGGATAAGTACAAACAT

Product: negative transcriptional regulator

Products: NA

Alternate protein names: Regulatory Protein-RofA ; Regulatory Protein; RofA Regulatory Protein; RofA/Nra-Like Transcriptional Regulator; RofA Family Transcriptional Regulator; Regulatory Protein RofA ; Transcriptional Regulator RofA Familiy

Number of amino acids: Translated: 511; Mature: 510

Protein sequence:

>511_residues
MPYVKKKKDSFLVETYLEQSIRDKSELVLLLFKSPTIIFSHVAKQTGLTAVQLKYYCKELDDFFGNNLDITIKKGKIICC
FVKPVKEFYLHQLYDTSTILKLLVFFIKNGTSSQPLIKFSKKYFLSSSSAYRLRESLIKLLREFGLRVSKNTIVGEEYRI
RYLIAMLYSKFGIVIYPLDHLDNQIIYRFLSQSATNLRTSPWLEEPFSFYNMLLALSWKRHQFAVSIPQTRIFRQLKKLF
IYDCLTRSSRQVIENAFSLTFSQGDLEYLFLIYITTNNSFASLQWTPQHIETCCHIFEKNDTFRLLLEPILKRLPQLNHS
KQDLIKALMYFSKSFLFNLQHFVIEIPSFSLPTYTGNSNLYKALKNIVNQWLAQLPGKRHLNEKHLQLFCSHIEQILKNK
QPALTVVLISSNFINAKLLTDTIPRYFSDKGIHFYSFYLLRDDIYQIPSLKPDLVITHSRLIPFVKNDLVKGVTVAEFSF
DNPDYSIASIQNLIYQLKDKKYQDFLNEQLQ

Sequences:

>Translated_511_residues
MPYVKKKKDSFLVETYLEQSIRDKSELVLLLFKSPTIIFSHVAKQTGLTAVQLKYYCKELDDFFGNNLDITIKKGKIICC
FVKPVKEFYLHQLYDTSTILKLLVFFIKNGTSSQPLIKFSKKYFLSSSSAYRLRESLIKLLREFGLRVSKNTIVGEEYRI
RYLIAMLYSKFGIVIYPLDHLDNQIIYRFLSQSATNLRTSPWLEEPFSFYNMLLALSWKRHQFAVSIPQTRIFRQLKKLF
IYDCLTRSSRQVIENAFSLTFSQGDLEYLFLIYITTNNSFASLQWTPQHIETCCHIFEKNDTFRLLLEPILKRLPQLNHS
KQDLIKALMYFSKSFLFNLQHFVIEIPSFSLPTYTGNSNLYKALKNIVNQWLAQLPGKRHLNEKHLQLFCSHIEQILKNK
QPALTVVLISSNFINAKLLTDTIPRYFSDKGIHFYSFYLLRDDIYQIPSLKPDLVITHSRLIPFVKNDLVKGVTVAEFSF
DNPDYSIASIQNLIYQLKDKKYQDFLNEQLQ
>Mature_510_residues
PYVKKKKDSFLVETYLEQSIRDKSELVLLLFKSPTIIFSHVAKQTGLTAVQLKYYCKELDDFFGNNLDITIKKGKIICCF
VKPVKEFYLHQLYDTSTILKLLVFFIKNGTSSQPLIKFSKKYFLSSSSAYRLRESLIKLLREFGLRVSKNTIVGEEYRIR
YLIAMLYSKFGIVIYPLDHLDNQIIYRFLSQSATNLRTSPWLEEPFSFYNMLLALSWKRHQFAVSIPQTRIFRQLKKLFI
YDCLTRSSRQVIENAFSLTFSQGDLEYLFLIYITTNNSFASLQWTPQHIETCCHIFEKNDTFRLLLEPILKRLPQLNHSK
QDLIKALMYFSKSFLFNLQHFVIEIPSFSLPTYTGNSNLYKALKNIVNQWLAQLPGKRHLNEKHLQLFCSHIEQILKNKQ
PALTVVLISSNFINAKLLTDTIPRYFSDKGIHFYSFYLLRDDIYQIPSLKPDLVITHSRLIPFVKNDLVKGVTVAEFSFD
NPDYSIASIQNLIYQLKDKKYQDFLNEQLQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60031; Mature: 59900

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYVKKKKDSFLVETYLEQSIRDKSELVLLLFKSPTIIFSHVAKQTGLTAVQLKYYCKEL
CCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHH
DDFFGNNLDITIKKGKIICCFVKPVKEFYLHQLYDTSTILKLLVFFIKNGTSSQPLIKFS
HHHCCCCEEEEEECCCEEEEEEHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHH
KKYFLSSSSAYRLRESLIKLLREFGLRVSKNTIVGEEYRIRYLIAMLYSKFGIVIYPLDH
HHHHHCCCHHHHHHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHHHHHHCCEEEEEHHH
LDNQIIYRFLSQSATNLRTSPWLEEPFSFYNMLLALSWKRHQFAVSIPQTRIFRQLKKLF
CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHH
IYDCLTRSSRQVIENAFSLTFSQGDLEYLFLIYITTNNSFASLQWTPQHIETCCHIFEKN
HHHHHHHHHHHHHHHHHHEEECCCCEEEEEEEEEEECCCEEEEEECHHHHHHHHHHHCCC
DTFRLLLEPILKRLPQLNHSKQDLIKALMYFSKSFLFNLQHFVIEIPSFSLPTYTGNSNL
CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHH
YKALKNIVNQWLAQLPGKRHLNEKHLQLFCSHIEQILKNKQPALTVVLISSNFINAKLLT
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHH
DTIPRYFSDKGIHFYSFYLLRDDIYQIPSLKPDLVITHSRLIPFVKNDLVKGVTVAEFSF
HHHHHHHCCCCCEEEEEEEEHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHCCCEEEEEEC
DNPDYSIASIQNLIYQLKDKKYQDFLNEQLQ
CCCCCHHHHHHHHHHHHHCHHHHHHHHHHCC
>Mature Secondary Structure 
PYVKKKKDSFLVETYLEQSIRDKSELVLLLFKSPTIIFSHVAKQTGLTAVQLKYYCKEL
CCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHH
DDFFGNNLDITIKKGKIICCFVKPVKEFYLHQLYDTSTILKLLVFFIKNGTSSQPLIKFS
HHHCCCCEEEEEECCCEEEEEEHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHH
KKYFLSSSSAYRLRESLIKLLREFGLRVSKNTIVGEEYRIRYLIAMLYSKFGIVIYPLDH
HHHHHCCCHHHHHHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHHHHHHCCEEEEEHHH
LDNQIIYRFLSQSATNLRTSPWLEEPFSFYNMLLALSWKRHQFAVSIPQTRIFRQLKKLF
CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHH
IYDCLTRSSRQVIENAFSLTFSQGDLEYLFLIYITTNNSFASLQWTPQHIETCCHIFEKN
HHHHHHHHHHHHHHHHHHEEECCCCEEEEEEEEEEECCCEEEEEECHHHHHHHHHHHCCC
DTFRLLLEPILKRLPQLNHSKQDLIKALMYFSKSFLFNLQHFVIEIPSFSLPTYTGNSNL
CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHH
YKALKNIVNQWLAQLPGKRHLNEKHLQLFCSHIEQILKNKQPALTVVLISSNFINAKLLT
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHH
DTIPRYFSDKGIHFYSFYLLRDDIYQIPSLKPDLVITHSRLIPFVKNDLVKGVTVAEFSF
HHHHHHHCCCCCEEEEEEEEHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHCCCEEEEEEC
DNPDYSIASIQNLIYQLKDKKYQDFLNEQLQ
CCCCCHHHHHHHHHHHHHCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA