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The map label for this gene is hslR [C]

Identifier: 21909543

GI number: 21909543

Start: 8902

End: 9174

Strand: Direct

Name: hslR [C]

Synonym: SpyM3_0007

Alternate gene names: 21909543

Gene position: 8902-9174 (Clockwise)

Preceding gene: 21909542

Following gene: 21909544

Centisome position: 0.47

GC content: 30.77

Gene sequence:

>273_bases
ATGAGACTAGATAAATATCTAAAGGTATCGCGCCTTATTAAACGTCGTTCAGTAGCAAAAGAAGTTGCGGATAAGGGACG
AATTAAAGTTAATGGGATACTTGCTAAAAGTTCAACGAATATAAAACTAAATGATCACATTGAAATTAGTTTTGGAAATA
AATTACTGACAGTAAGAGTCATTGAAATAAAAGATAGTACAAAAAAAGAAGATGCTCTTAAGATGTATGAGATAATCAGT
GAAACAAGGATAACATTAAATGAAGAAGCCTAG

Upstream 100 bases:

>100_bases
TACTTTTGTCAAAAATCTAAGATCTTTGCTGCGAAATTAGGATCTTTTCTACCATTTAAAAAATAAAAATGATAAAATGA
AGAGGATTGTAGGAGAAATT

Downstream 100 bases:

>100_bases
TATTGTTCAATTAAATAATCATTATATTAAAAAAGAGAATCTCAAAAAAAAATTTGAAGAAGAAGAATCTCAAAAAAGAA
ATCGTTTTATGGGATGGATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MRLDKYLKVSRLIKRRSVAKEVADKGRIKVNGILAKSSTNIKLNDHIEISFGNKLLTVRVIEIKDSTKKEDALKMYEIIS
ETRITLNEEA

Sequences:

>Translated_90_residues
MRLDKYLKVSRLIKRRSVAKEVADKGRIKVNGILAKSSTNIKLNDHIEISFGNKLLTVRVIEIKDSTKKEDALKMYEIIS
ETRITLNEEA
>Mature_90_residues
MRLDKYLKVSRLIKRRSVAKEVADKGRIKVNGILAKSSTNIKLNDHIEISFGNKLLTVRVIEIKDSTKKEDALKMYEIIS
ETRITLNEEA

Specific function: Involved In The Recycling Of Free 50s Ribosomal Subunits That Still Carry A Nascent Chain. Binds RNA More Specifically Than DNA. Binds With Very High Affinity To The Free 50s Ribosomal Subunit. Does Not Bind It When It Is Part Of The 70s Ribosome. [C]

COG id: COG1188

COG function: function code J; Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002942 [H]

Pfam domain/function: PF01479 S4 [H]

EC number: NA

Molecular weight: Translated: 10329; Mature: 10329

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLDKYLKVSRLIKRRSVAKEVADKGRIKVNGILAKSSTNIKLNDHIEISFGNKLLTVRV
CCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEECCEEEEEECCEEEEEEE
IEIKDSTKKEDALKMYEIISETRITLNEEA
EEECCCCCCHHHHHHHHHHHHCEEEEECCC
>Mature Secondary Structure
MRLDKYLKVSRLIKRRSVAKEVADKGRIKVNGILAKSSTNIKLNDHIEISFGNKLLTVRV
CCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEECCEEEEEECCEEEEEEE
IEIKDSTKKEDALKMYEIISETRITLNEEA
EEECCCCCCHHHHHHHHHHHHCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11463916 [H]