| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is surE [H]
Identifier: 218930376
GI number: 218930376
Start: 3747003
End: 3747767
Strand: Reverse
Name: surE [H]
Synonym: YPO3358
Alternate gene names: 218930376
Gene position: 3747767-3747003 (Counterclockwise)
Preceding gene: 218930377
Following gene: 218930375
Centisome position: 80.53
GC content: 50.72
Gene sequence:
>765_bases ATGATACGGATATTATTGAGTAACGATGATGGTATTTCTGCGCCAGGGATCCAGACGCTGGCCAGTGCATTGCGGGGATT TGCTCAGGTGCAAATTGTGGCACCCGATCGTAACCGTAGTGGCGCTTCCAATGCATTGACTCTGGATAGTGCATTGCGGA TCACTACCTTATCTAATGGTGATATTGCGGTGCAGCAAGGGACCCCCACCGATTGCGTCTATCTGGGTGTGAATGCGCTG ATGCGCCCACGGCCTGACATCGTTGTCTCTGGTATTAATGCTGGCCCTAATTTAGGGGATGATGTTATCTATTCGGGTAC CGTAGCAGCGGCGATGGAAGGGCGTCATTTGGGATACCCAGCCTTGGCTGTCTCGCTCAACGGTCATCAGCATTACGATA CGGCGGCGGCAGTGACTTGCCGTTTATTACGTGCGTTACAGCGCAAACCACTGCGTACCGGCAAGATCCTCAATATAAAT GTTCCTGATTTGCCTTTAGCGGAAATTAAAGGGATTCGGGTGACGCGTTGTGGTAGCCGCCATCCGGCAGAGCAGGTATT TTGTCAGCAAGATCCCAGAGGGCAAGATCTTTATTGGATCGGGCCGCCGGGTGAAAAGTATGATGCAGGGCCAGATACTG ACTTTGCGGCGGTTGAACAAGGTTATGTATCAATAACGCCGCTTCAAGTCGATTTAACGGCTTATATGGCACAAGAAGTG GTTGAAAGTTGGTTAGCCAATACTGAGGTTGACGGGGAATGGTAA
Upstream 100 bases:
>100_bases AACTGGTGGGATGATGTCACTCTTGAGCTGAGTTTCTGGCTCCCTGCGGGGAGCTTTGCGACCAGTGTGGTGAGGGAAAT AATGAACCAGGATCGGGCTG
Downstream 100 bases:
>100_bases ATAAACGCATGCAAACATTGTTGATGCAGTTACGTCAGCAAGGTATTCACGATGAACGCCTGTTACAGGCGATCGAAGCG GTACCGCGTGAGCGTTTTGT
Product: stationary phase survival protein SurE
Products: NA
Alternate protein names: 5'/3'-nucleotidase; Nucleoside monophosphate phosphohydrolase; Exopolyphosphatase [H]
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MIRILLSNDDGISAPGIQTLASALRGFAQVQIVAPDRNRSGASNALTLDSALRITTLSNGDIAVQQGTPTDCVYLGVNAL MRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGYPALAVSLNGHQHYDTAAAVTCRLLRALQRKPLRTGKILNIN VPDLPLAEIKGIRVTRCGSRHPAEQVFCQQDPRGQDLYWIGPPGEKYDAGPDTDFAAVEQGYVSITPLQVDLTAYMAQEV VESWLANTEVDGEW
Sequences:
>Translated_254_residues MIRILLSNDDGISAPGIQTLASALRGFAQVQIVAPDRNRSGASNALTLDSALRITTLSNGDIAVQQGTPTDCVYLGVNAL MRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGYPALAVSLNGHQHYDTAAAVTCRLLRALQRKPLRTGKILNIN VPDLPLAEIKGIRVTRCGSRHPAEQVFCQQDPRGQDLYWIGPPGEKYDAGPDTDFAAVEQGYVSITPLQVDLTAYMAQEV VESWLANTEVDGEW >Mature_254_residues MIRILLSNDDGISAPGIQTLASALRGFAQVQIVAPDRNRSGASNALTLDSALRITTLSNGDIAVQQGTPTDCVYLGVNAL MRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGYPALAVSLNGHQHYDTAAAVTCRLLRALQRKPLRTGKILNIN VPDLPLAEIKGIRVTRCGSRHPAEQVFCQQDPRGQDLYWIGPPGEKYDAGPDTDFAAVEQGYVSITPLQVDLTAYMAQEV VESWLANTEVDGEW
Specific function: Nucleotidase with a broad substrate specificity as it can dephosphorylate various ribo- and deoxyribonucleoside 5'- monophosphates and ribonucleoside 3'-monophosphates with highest affinity to 3'-AMP. Also hydrolyzes polyphosphate (exopolyphosphatase acti
COG id: COG0496
COG function: function code R; Predicted acid phosphatase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surE nucleotidase family [H]
Homologues:
Organism=Escherichia coli, GI1789101, Length=253, Percent_Identity=80.2371541501976, Blast_Score=419, Evalue=1e-119,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002828 [H]
Pfam domain/function: PF01975 SurE [H]
EC number: =3.1.3.5; =3.1.3.6; =3.6.1.11 [H]
Molecular weight: Translated: 27231; Mature: 27231
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRILLSNDDGISAPGIQTLASALRGFAQVQIVAPDRNRSGASNALTLDSALRITTLSNG CEEEEEECCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEECCEEEEEEECCC DIAVQQGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGYP CEEEECCCCCCEEEECHHHHCCCCCCEEEEECCCCCCCCCCEEECCEEEEEECCCCCCCC ALAVSLNGHQHYDTAAAVTCRLLRALQRKPLRTGKILNINVPDLPLAEIKGIRVTRCGSR EEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHCCEEEEECCCC HPAEQVFCQQDPRGQDLYWIGPPGEKYDAGPDTDFAAVEQGYVSITPLQVDLTAYMAQEV CCHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHCCCEEEEEEEEHHHHHHHHHH VESWLANTEVDGEW HHHHHHCCCCCCCC >Mature Secondary Structure MIRILLSNDDGISAPGIQTLASALRGFAQVQIVAPDRNRSGASNALTLDSALRITTLSNG CEEEEEECCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEECCEEEEEEECCC DIAVQQGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGYP CEEEECCCCCCEEEECHHHHCCCCCCEEEEECCCCCCCCCCEEECCEEEEEECCCCCCCC ALAVSLNGHQHYDTAAAVTCRLLRALQRKPLRTGKILNINVPDLPLAEIKGIRVTRCGSR EEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHCCEEEEECCCC HPAEQVFCQQDPRGQDLYWIGPPGEKYDAGPDTDFAAVEQGYVSITPLQVDLTAYMAQEV CCHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHCCCEEEEEEEEHHHHHHHHHH VESWLANTEVDGEW HHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA