| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is pstS [H]
Identifier: 218930232
GI number: 218930232
Start: 3566145
End: 3567209
Strand: Reverse
Name: pstS [H]
Synonym: YPO3203
Alternate gene names: 218930232
Gene position: 3567209-3566145 (Counterclockwise)
Preceding gene: 218930233
Following gene: 218930231
Centisome position: 76.65
GC content: 48.92
Gene sequence:
>1065_bases ATGAAATGGGGAAAACTGGCGCTCTTAAATGTCATTTTATGGCATAGCTATACTGTTTTTGCGCAATCAATAGCTTTAGT ACAGCCAGTGGCTTTAACCCGATCAGTGGCTTTAACTCGATCAGTGGCTTTAGTACTGCCAGTGACGCTAGCCTCTCCCT CAATTACCGTCTCTCCGTCGGTACCAATGCCCGTTGCCAACACCCTATCAGGAAACCTTTCCAGTGTTGGTTCTGACACG TTGGCCAATCTGATGTCATTGTGGGCAAATGATTTCAATCATCACTATCCTGGCGTTAATCTGCAAATACAGGCTGCGGG GTCATCTACCGCTCCTGCTGCGCTGGCTGCCGGGGCAACGCAGCTTGGCCCAATGAGCCGGCCAATGAAAGCTGGCGAGA TTGCTGCTTTTATTCAACGCTATGGCTACCCACCGTTAGCCGTGCCAGTAGCCGTGGATGCGCTAGTGGTGTTTGTTCAT CAGGATAACCCTCTGAATAGGCTGACGTTATCGCAACTGGATGCTATTTTTTCGCAAAATCGCCGTTGTGGAGAACCCCA GAAAATTCAACGCTTCGGTGACTTGGGGTTGAGTGGCGATTGGGCGGCACGCCCCCTACAACGCTATGGTCGTAATTCTG CATCGGGGACGTATGGCTATTTTAAGCGCCGGGTACTCTGTGATGGTGATTTTATAAATAATATCAACGAATTACCCGGA TCTGCATCCGTGGTGCAAGCGGTGGCGGGTTCATTGAATGGCATCGGTTATTCCAGTATTGGTTTTCGTAACAGTGGTGT TAAATCACTGCCGTTGGCAGCGAGTGGGCAAGATTTTGTTATGCCAACTGCAGAAAATGTCAGTAATGGCCTCTATCCGT TATCACGCTATCTCTATATTTATATTAATAAAGCACCAGGGCAGCCGCTGGAAGCACTCACTGCGGCATTTCTTGAGCGT GCGCTATCCCCCGAAGGGCAAAAGTTGGTCAGCCATGACGGCTATTTGCCATTACCGCCTGCTATGTTGAATAACACCCG AAAAACATTGGGTTTTACTGACTAA
Upstream 100 bases:
>100_bases GGGTACCCGTTTTATTTTTACCTTACCGAACAGGTTGATTGTTCCAACTGTTTTAGTCGAGAATGCAGTCAAATCTTAAG ACGGTGCGGATAAAAGCCTA
Downstream 100 bases:
>100_bases TCTGCTCTTTATATGTACTCAAAAGTAGGGTCTATCGCTGTTTCAACCAACAAAAATAATTTTGGGTTATTCCGGTTGAG TGAAATTGATGGAGCCTGTG
Product: phosphate binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MKWGKLALLNVILWHSYTVFAQSIALVQPVALTRSVALTRSVALVLPVTLASPSITVSPSVPMPVANTLSGNLSSVGSDT LANLMSLWANDFNHHYPGVNLQIQAAGSSTAPAALAAGATQLGPMSRPMKAGEIAAFIQRYGYPPLAVPVAVDALVVFVH QDNPLNRLTLSQLDAIFSQNRRCGEPQKIQRFGDLGLSGDWAARPLQRYGRNSASGTYGYFKRRVLCDGDFINNINELPG SASVVQAVAGSLNGIGYSSIGFRNSGVKSLPLAASGQDFVMPTAENVSNGLYPLSRYLYIYINKAPGQPLEALTAAFLER ALSPEGQKLVSHDGYLPLPPAMLNNTRKTLGFTD
Sequences:
>Translated_354_residues MKWGKLALLNVILWHSYTVFAQSIALVQPVALTRSVALTRSVALVLPVTLASPSITVSPSVPMPVANTLSGNLSSVGSDT LANLMSLWANDFNHHYPGVNLQIQAAGSSTAPAALAAGATQLGPMSRPMKAGEIAAFIQRYGYPPLAVPVAVDALVVFVH QDNPLNRLTLSQLDAIFSQNRRCGEPQKIQRFGDLGLSGDWAARPLQRYGRNSASGTYGYFKRRVLCDGDFINNINELPG SASVVQAVAGSLNGIGYSSIGFRNSGVKSLPLAASGQDFVMPTAENVSNGLYPLSRYLYIYINKAPGQPLEALTAAFLER ALSPEGQKLVSHDGYLPLPPAMLNNTRKTLGFTD >Mature_354_residues MKWGKLALLNVILWHSYTVFAQSIALVQPVALTRSVALTRSVALVLPVTLASPSITVSPSVPMPVANTLSGNLSSVGSDT LANLMSLWANDFNHHYPGVNLQIQAAGSSTAPAALAAGATQLGPMSRPMKAGEIAAFIQRYGYPPLAVPVAVDALVVFVH QDNPLNRLTLSQLDAIFSQNRRCGEPQKIQRFGDLGLSGDWAARPLQRYGRNSASGTYGYFKRRVLCDGDFINNINELPG SASVVQAVAGSLNGIGYSSIGFRNSGVKSLPLAASGQDFVMPTAENVSNGLYPLSRYLYIYINKAPGQPLEALTAAFLER ALSPEGQKLVSHDGYLPLPPAMLNNTRKTLGFTD
Specific function: May be involved in the system for phosphate transport across the cytoplasmic membrane [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell inner membrane. Note=Found in the cytoplasmic membrane in a form that is closely associated with the cell wall [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 37755; Mature: 37755
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWGKLALLNVILWHSYTVFAQSIALVQPVALTRSVALTRSVALVLPVTLASPSITVSPS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEECCC VPMPVANTLSGNLSSVGSDTLANLMSLWANDFNHHYPGVNLQIQAAGSSTAPAALAAGAT CCCCCHHHCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHCCCH QLGPMSRPMKAGEIAAFIQRYGYPPLAVPVAVDALVVFVHQDNPLNRLTLSQLDAIFSQN HCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHCC RRCGEPQKIQRFGDLGLSGDWAARPLQRYGRNSASGTYGYFKRRVLCDGDFINNINELPG CCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHEEEECCHHHHHHHHCCC SASVVQAVAGSLNGIGYSSIGFRNSGVKSLPLAASGQDFVMPTAENVSNGLYPLSRYLYI HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHCCEEEEE YINKAPGQPLEALTAAFLERALSPEGQKLVSHDGYLPLPPAMLNNTRKTLGFTD EEECCCCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHCCCHHHCCCCC >Mature Secondary Structure MKWGKLALLNVILWHSYTVFAQSIALVQPVALTRSVALTRSVALVLPVTLASPSITVSPS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEECCC VPMPVANTLSGNLSSVGSDTLANLMSLWANDFNHHYPGVNLQIQAAGSSTAPAALAAGAT CCCCCHHHCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHCCCH QLGPMSRPMKAGEIAAFIQRYGYPPLAVPVAVDALVVFVHQDNPLNRLTLSQLDAIFSQN HCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHCC RRCGEPQKIQRFGDLGLSGDWAARPLQRYGRNSASGTYGYFKRRVLCDGDFINNINELPG CCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHEEEECCHHHHHHHHCCC SASVVQAVAGSLNGIGYSSIGFRNSGVKSLPLAASGQDFVMPTAENVSNGLYPLSRYLYI HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHCCEEEEE YINKAPGQPLEALTAAFLERALSPEGQKLVSHDGYLPLPPAMLNNTRKTLGFTD EEECCCCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7741855 [H]