Definition Yersinia pestis CO92 chromosome, complete genome.
Accession NC_003143
Length 4,653,728

Click here to switch to the map view.

The map label for this gene is 218930189

Identifier: 218930189

GI number: 218930189

Start: 3523021

End: 3523224

Strand: Reverse

Name: 218930189

Synonym: YPO3159

Alternate gene names: NA

Gene position: 3523224-3523021 (Counterclockwise)

Preceding gene: 218930190

Following gene: 218930188

Centisome position: 75.71

GC content: 50.49

Gene sequence:

>204_bases
TTGCCGAGGGAACGACTCATGCGTGAATTTTACCGCGACAACATTCGCTTGCTTTCCTCGACTCATAACCTATGCGCCGC
TATAATGTCGCGTCTTATTTTTCCGGAATGGTTTCGGGACGCTTCTGACATCTGGGATACTCGGTTCTGTAATGCGGCCG
TCCCGGTTCTTGGAGGGTGTTTTCAGAGTTCGCATCATTCCTGA

Upstream 100 bases:

>100_bases
TTTAGGGTATTAGTAGATGAGAATTTTACAAACGGCTCTAGGGCCGTTTGTGTTTCTGTATAGGCGACATCTTCATTTAA
TCGTTGCGCCATAGGAGTTT

Downstream 100 bases:

>100_bases
AAAGGTAATGGTGCTGCTTCGTTTGCAGCTTCTGGAGTTGACCGAGCACTGTGATTTTTTTGAGGTAACAAGATGCAAGT
TTCTGTTGAAACCACTCAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 67; Mature: 66

Protein sequence:

>67_residues
MPRERLMREFYRDNIRLLSSTHNLCAAIMSRLIFPEWFRDASDIWDTRFCNAAVPVLGGCFQSSHHS

Sequences:

>Translated_67_residues
MPRERLMREFYRDNIRLLSSTHNLCAAIMSRLIFPEWFRDASDIWDTRFCNAAVPVLGGCFQSSHHS
>Mature_66_residues
PRERLMREFYRDNIRLLSSTHNLCAAIMSRLIFPEWFRDASDIWDTRFCNAAVPVLGGCFQSSHHS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7874; Mature: 7743

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
9.0 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRERLMREFYRDNIRLLSSTHNLCAAIMSRLIFPEWFRDASDIWDTRFCNAAVPVLGGC
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
FQSSHHS
HHCCCCC
>Mature Secondary Structure 
PRERLMREFYRDNIRLLSSTHNLCAAIMSRLIFPEWFRDASDIWDTRFCNAAVPVLGGC
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
FQSSHHS
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA