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The map label for this gene is dapX [H]

Identifier: 218930106

GI number: 218930106

Start: 3418239

End: 3419297

Strand: Reverse

Name: dapX [H]

Synonym: YPO3061

Alternate gene names: 218930106

Gene position: 3419297-3418239 (Counterclockwise)

Preceding gene: 218930107

Following gene: 218930105

Centisome position: 73.47

GC content: 51.46

Gene sequence:

>1059_bases
ATGGCAATATCATTGCAAAAATCGACGGTGGTAAAAGTTGTAGGTGTTTCGCTGGTGATGTTACTGGCCGCCTGCTCGAC
GGACCAACGCTACAAACGCCAGGTGAGTGGTGACGAGTCTTATCTTACAGCGCCAGGGCTAAAGCCGCTTAACGCACCAT
CAGGTATGATCCTGCCGGTACAAAATGGTGAGTTTGATGTCCGCACCGTTAATTCGCAAGGCGCTGTGGGCAAACAGTTG
GATATTCGTCCACCGGTACAACCACTGACATTATTGAGTGGCTCCCGCGCCGAAAATGCAACCGATACCAGCAAGCTATT
GTTAGAGAATAGCCCGCAAAACCGCGATCTGTGGGCTCAGGTTACTCGTGTCCTGCAAGATCATAACTGGCCAATAGCCA
GCCGTCAGGATGCCAGCCAAACGCTGACCACTGATTGGATCAAATGGAACCGGGCAGATGAAGATGTACAGTTCGAAGGC
CGTTACCAGATAAGTGTGCAGGAGCAAGGTTATCAGCTGGCATTAGTAGTGAAATCCCTTGAGTTACAACAAGGGGGGAA
AACCATCACTCAGTATAGCGAGATCCAGCGCTATAACAGCGCAATGCTGAATGCCATTATCGAAGGTTTGGATAAAGTGC
GGGCTGACAGCGAGAGCAGTCAGGCCTCACGTAAAGTCGGTACGCTGGATGTACAAAGTGGCAGTGACGATACTGGCTTG
CCTCTGCTGATTGTCCGTGCCCCTTATGCGGTTGTCTGGGAACGTCTGCCTGCTGCGCTTGAGAAAGTTGGCATGAAAGT
GACCGACCGCAGCCGTCCGCAAGGTACTGTCAGCGTCACCAGTAAATCGCTGAGTAGCAGTAGCTGGGACGCACTGGGTG
CCAAAGATCCTGAATTGCCAGAAGGCGATTATAAGTTACAGGTCGGTGACCTTGATAACCGCAGTAGCTTACAGTTCATT
GGTCCGAAAGGGCATACCTTAACCCAGGCGCAGAATGATGCGTTGGTTGCGGTATTCCAGGCAGCGTTTAGCCAGACTAG
CGCAACCGCGATAAAATAA

Upstream 100 bases:

>100_bases
CTATGCGCCTGCCAATGACCCCACTGACTGATCCGGCCAAACGGATTGTGGAAGACGCGTTGAAAAGCGCAGGTTTGCTG
TAACTTCTTAGGGAAATTTG

Downstream 100 bases:

>100_bases
AACCAAAGGGGCTTCGGCCCCTTTAGTTATTGTGCCCAGAAAACCCCCAGCTAGGCTGGGGGTTCAGTAAAGCTTTCAGC
TTTGGGTCAGTTATAAAAAC

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MAISLQKSTVVKVVGVSLVMLLAACSTDQRYKRQVSGDESYLTAPGLKPLNAPSGMILPVQNGEFDVRTVNSQGAVGKQL
DIRPPVQPLTLLSGSRAENATDTSKLLLENSPQNRDLWAQVTRVLQDHNWPIASRQDASQTLTTDWIKWNRADEDVQFEG
RYQISVQEQGYQLALVVKSLELQQGGKTITQYSEIQRYNSAMLNAIIEGLDKVRADSESSQASRKVGTLDVQSGSDDTGL
PLLIVRAPYAVVWERLPAALEKVGMKVTDRSRPQGTVSVTSKSLSSSSWDALGAKDPELPEGDYKLQVGDLDNRSSLQFI
GPKGHTLTQAQNDALVAVFQAAFSQTSATAIK

Sequences:

>Translated_352_residues
MAISLQKSTVVKVVGVSLVMLLAACSTDQRYKRQVSGDESYLTAPGLKPLNAPSGMILPVQNGEFDVRTVNSQGAVGKQL
DIRPPVQPLTLLSGSRAENATDTSKLLLENSPQNRDLWAQVTRVLQDHNWPIASRQDASQTLTTDWIKWNRADEDVQFEG
RYQISVQEQGYQLALVVKSLELQQGGKTITQYSEIQRYNSAMLNAIIEGLDKVRADSESSQASRKVGTLDVQSGSDDTGL
PLLIVRAPYAVVWERLPAALEKVGMKVTDRSRPQGTVSVTSKSLSSSSWDALGAKDPELPEGDYKLQVGDLDNRSSLQFI
GPKGHTLTQAQNDALVAVFQAAFSQTSATAIK
>Mature_351_residues
AISLQKSTVVKVVGVSLVMLLAACSTDQRYKRQVSGDESYLTAPGLKPLNAPSGMILPVQNGEFDVRTVNSQGAVGKQLD
IRPPVQPLTLLSGSRAENATDTSKLLLENSPQNRDLWAQVTRVLQDHNWPIASRQDASQTLTTDWIKWNRADEDVQFEGR
YQISVQEQGYQLALVVKSLELQQGGKTITQYSEIQRYNSAMLNAIIEGLDKVRADSESSQASRKVGTLDVQSGSDDTGLP
LLIVRAPYAVVWERLPAALEKVGMKVTDRSRPQGTVSVTSKSLSSSSWDALGAKDPELPEGDYKLQVGDLDNRSSLQFIG
PKGHTLTQAQNDALVAVFQAAFSQTSATAIK

Specific function: Non-essential lipoprotein [H]

COG id: COG3317

COG function: function code M; Uncharacterized lipoprotein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082112, Length=345, Percent_Identity=62.8985507246377, Blast_Score=442, Evalue=1e-125,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010653
- InterPro:   IPR014524 [H]

Pfam domain/function: PF06804 Lipoprotein_18 [H]

EC number: NA

Molecular weight: Translated: 38328; Mature: 38196

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAISLQKSTVVKVVGVSLVMLLAACSTDQRYKRQVSGDESYLTAPGLKPLNAPSGMILPV
CEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEECCCCCCCCCCCCEEEEE
QNGEFDVRTVNSQGAVGKQLDIRPPVQPLTLLSGSRAENATDTSKLLLENSPQNRDLWAQ
CCCCEEEEEECCCCCCCCCCCCCCCCCHHHEECCCCCCCCCCHHHHHCCCCCCCCHHHHH
VTRVLQDHNWPIASRQDASQTLTTDWIKWNRADEDVQFEGRYQISVQEQGYQLALVVKSL
HHHHHHHCCCCCCCCCCCHHHHHHHHHEECCCCCCEEECCEEEEEEECCCEEEEEEEEHH
ELQQGGKTITQYSEIQRYNSAMLNAIIEGLDKVRADSESSQASRKVGTLDVQSGSDDTGL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEECCCCCCCCC
PLLIVRAPYAVVWERLPAALEKVGMKVTDRSRPQGTVSVTSKSLSSSSWDALGAKDPELP
EEEEEECCHHHHHHHHHHHHHHHCCEECCCCCCCCEEEEEHHHCCCCCCCCCCCCCCCCC
EGDYKLQVGDLDNRSSLQFIGPKGHTLTQAQNDALVAVFQAAFSQTSATAIK
CCCEEEEECCCCCCCCEEEECCCCCEECCCCCCHHHHHHHHHHHCCCHHCCC
>Mature Secondary Structure 
AISLQKSTVVKVVGVSLVMLLAACSTDQRYKRQVSGDESYLTAPGLKPLNAPSGMILPV
EEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEECCCCCCCCCCCCEEEEE
QNGEFDVRTVNSQGAVGKQLDIRPPVQPLTLLSGSRAENATDTSKLLLENSPQNRDLWAQ
CCCCEEEEEECCCCCCCCCCCCCCCCCHHHEECCCCCCCCCCHHHHHCCCCCCCCHHHHH
VTRVLQDHNWPIASRQDASQTLTTDWIKWNRADEDVQFEGRYQISVQEQGYQLALVVKSL
HHHHHHHCCCCCCCCCCCHHHHHHHHHEECCCCCCEEECCEEEEEEECCCEEEEEEEEHH
ELQQGGKTITQYSEIQRYNSAMLNAIIEGLDKVRADSESSQASRKVGTLDVQSGSDDTGL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEECCCCCCCCC
PLLIVRAPYAVVWERLPAALEKVGMKVTDRSRPQGTVSVTSKSLSSSSWDALGAKDPELP
EEEEEECCHHHHHHHHHHHHHHHCCEECCCCCCCCEEEEEHHHCCCCCCCCCCCCCCCCC
EGDYKLQVGDLDNRSSLQFIGPKGHTLTQAQNDALVAVFQAAFSQTSATAIK
CCCEEEEECCCCCCCCEEEECCCCCEECCCCCCHHHHHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1885529; 2120198; 9205837; 9278503 [H]