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The map label for this gene is ypfJ [H]

Identifier: 218930103

GI number: 218930103

Start: 3415660

End: 3416526

Strand: Reverse

Name: ypfJ [H]

Synonym: YPO3058

Alternate gene names: 218930103

Gene position: 3416526-3415660 (Counterclockwise)

Preceding gene: 218930104

Following gene: 218930102

Centisome position: 73.41

GC content: 51.56

Gene sequence:

>867_bases
ATGCGTTGGCAAGGTCGTCGTGAAAGTAATAATGTGGAAGATCGTCGCGGGAATGCTTCCGGTGGTGGTGGGTTCCGGCC
CCCAATAAGGGGCAAAGGAGGGGTCGCTATCCTGATTATTGTGTTGGTCGCGGGCTACTACGGCGTTGATCTGACGCCGC
TATTAAATGGCGGTGATCCACTGTCACAAACCCAGACGCCGCCCCGTTCTCCTAAAGCTGTCAGTACGCAAGATGACCAA
TATGCTAAATTCACCTCGGTCATCCTGGCCGATACTGAAGATACCTGGAAACCTATCTTCCAGAAGATGGGCCGGACTTA
TCAGGATCCAAAACTGGTCATGTACCGTGGTGCAACCCAGACCGGTTGTGGTACCGGTCAGTCGGTCATGGGGCCGTTTT
ATTGCCCGGCAGATAGCACCATCTATATCGATCTCTCTTTCTATGAAGATATGAAGAATAAATTAGGTGCGGGCGGTGAT
TTTGCTCAGGCGTATGTTATTGCTCATGAAGTCGGCCATCACGTACAACATTTGATGGGGATTGATGCGAAGGTTCGTCA
GCAACAGCAGGGCGTTTCTCAGGCGGAAGGTAATCGCTTATCGGTAAAAATGGAGCTGCAAGCCGACTGTTTTGCCGGGG
TTTGGGGCAAGGCGATGGAAGAGCAACAGGTGTTGGAAGCAGGGGATTTACAAGAAGCGCTCAATGCGGCACAGGCCATT
GGCGATGACCGGCTACAACAGCAAAGCCAGGGCCGCGTCGTGCCAGATAGCTTTACTCACGGAACCTCTCAGCAACGTTA
TACCTGGTTTAAACGTGGTTTTGACAGTGGTGATCCTAATAGCTGTAACACGTTTGCTAGTCACTAG

Upstream 100 bases:

>100_bases
GTGAAATCCCACCAGTTATATCAATCACCGCTATTTTTAATGGTATTCGATCTATCGATTTCCTACGATACGCGTAGAAA
ATCTGTCTGGGAGTCGTGCT

Downstream 100 bases:

>100_bases
GTTTAGCTGAGCCGTTAATCGATAATCATAAGATCTATTCTTCTCTGATTGGCACGCTTGTGCCGACATTGATTGCAATA
CAGGGATAAAGTCATGGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MRWQGRRESNNVEDRRGNASGGGGFRPPIRGKGGVAILIIVLVAGYYGVDLTPLLNGGDPLSQTQTPPRSPKAVSTQDDQ
YAKFTSVILADTEDTWKPIFQKMGRTYQDPKLVMYRGATQTGCGTGQSVMGPFYCPADSTIYIDLSFYEDMKNKLGAGGD
FAQAYVIAHEVGHHVQHLMGIDAKVRQQQQGVSQAEGNRLSVKMELQADCFAGVWGKAMEEQQVLEAGDLQEALNAAQAI
GDDRLQQQSQGRVVPDSFTHGTSQQRYTWFKRGFDSGDPNSCNTFASH

Sequences:

>Translated_288_residues
MRWQGRRESNNVEDRRGNASGGGGFRPPIRGKGGVAILIIVLVAGYYGVDLTPLLNGGDPLSQTQTPPRSPKAVSTQDDQ
YAKFTSVILADTEDTWKPIFQKMGRTYQDPKLVMYRGATQTGCGTGQSVMGPFYCPADSTIYIDLSFYEDMKNKLGAGGD
FAQAYVIAHEVGHHVQHLMGIDAKVRQQQQGVSQAEGNRLSVKMELQADCFAGVWGKAMEEQQVLEAGDLQEALNAAQAI
GDDRLQQQSQGRVVPDSFTHGTSQQRYTWFKRGFDSGDPNSCNTFASH
>Mature_288_residues
MRWQGRRESNNVEDRRGNASGGGGFRPPIRGKGGVAILIIVLVAGYYGVDLTPLLNGGDPLSQTQTPPRSPKAVSTQDDQ
YAKFTSVILADTEDTWKPIFQKMGRTYQDPKLVMYRGATQTGCGTGQSVMGPFYCPADSTIYIDLSFYEDMKNKLGAGGD
FAQAYVIAHEVGHHVQHLMGIDAKVRQQQQGVSQAEGNRLSVKMELQADCFAGVWGKAMEEQQVLEAGDLQEALNAAQAI
GDDRLQQQSQGRVVPDSFTHGTSQQRYTWFKRGFDSGDPNSCNTFASH

Specific function: Unknown

COG id: COG2321

COG function: function code R; Predicted metalloprotease

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788819, Length=289, Percent_Identity=73.7024221453287, Blast_Score=429, Evalue=1e-122,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007343 [H]

Pfam domain/function: PF04228 Zn_peptidase [H]

EC number: NA

Molecular weight: Translated: 31532; Mature: 31532

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWQGRRESNNVEDRRGNASGGGGFRPPIRGKGGVAILIIVLVAGYYGVDLTPLLNGGDP
CCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCC
LSQTQTPPRSPKAVSTQDDQYAKFTSVILADTEDTWKPIFQKMGRTYQDPKLVMYRGATQ
CCCCCCCCCCCCCCCCCCHHHHHHHEEEEECCCHHHHHHHHHHCCCCCCCCEEEEECCCC
TGCGTGQSVMGPFYCPADSTIYIDLSFYEDMKNKLGAGGDFAQAYVIAHEVGHHVQHLMG
CCCCCCCCCCCCEECCCCCEEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC
IDAKVRQQQQGVSQAEGNRLSVKMELQADCFAGVWGKAMEEQQVLEAGDLQEALNAAQAI
CCHHHHHHHHCHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
GDDRLQQQSQGRVVPDSFTHGTSQQRYTWFKRGFDSGDPNSCNTFASH
CHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRWQGRRESNNVEDRRGNASGGGGFRPPIRGKGGVAILIIVLVAGYYGVDLTPLLNGGDP
CCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCC
LSQTQTPPRSPKAVSTQDDQYAKFTSVILADTEDTWKPIFQKMGRTYQDPKLVMYRGATQ
CCCCCCCCCCCCCCCCCCHHHHHHHEEEEECCCHHHHHHHHHHCCCCCCCCEEEEECCCC
TGCGTGQSVMGPFYCPADSTIYIDLSFYEDMKNKLGAGGDFAQAYVIAHEVGHHVQHLMG
CCCCCCCCCCCCEECCCCCEEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC
IDAKVRQQQQGVSQAEGNRLSVKMELQADCFAGVWGKAMEEQQVLEAGDLQEALNAAQAI
CCHHHHHHHHCHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
GDDRLQQQSQGRVVPDSFTHGTSQQRYTWFKRGFDSGDPNSCNTFASH
CHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]