| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is maeB [H]
Identifier: 218930079
GI number: 218930079
Start: 3386611
End: 3388896
Strand: Reverse
Name: maeB [H]
Synonym: YPO3034
Alternate gene names: 218930079
Gene position: 3388896-3386611 (Counterclockwise)
Preceding gene: 218930080
Following gene: 218930076
Centisome position: 72.82
GC content: 51.22
Gene sequence:
>2286_bases ATGGACGAACAATTGAAACAGAGTGCGCTTGATTTTCATCAATTTCCTGTTCCAGGGAAAATCCAGGTTTCGCCAACCAA ACCGTTGGCGACCCAACGGGATTTGGCACTGGCGTATTCTCCCGGCGTTGCTGCACCCTGTCTGGAAATTGCTGCAGATC CTTTAGCTGCCTACAAATACACTGCCCGTGGCAATTTAGTGGCCGTTATCTCTAACGGTACCGCCGTGCTGGGGCTGGGT AATATCGGCGCATTGGCCGGTAAACCCGTGATGGAAGGTAAAGGCGTTCTGTTTAAGAAATTCTCAGGCATTGATGTTTT CGATATTGAGGTGGATGAACTCGATCCAGATAAACTGATCGATATTATTGCGTCTTTGGAACCCACCTTTGGCGGTATCA ATCTGGAAGATATCAAAGCGCCAGAGTGTTTTTATATTGAGAAAAAACTCCGTGAACGCATGAAAATCCCAGTATTCCAT GACGATCAGCATGGTACGGCGATCATCTGCACCGCCGCAGTACTGAACGGTTTACGGGTTGTGAAGAAAGATATCAGCGA TGTGAAATTGGTGGTCTCCGGCGCAGGTGCGGCCTCTATCGCCTGCTTAAACTTGCTGGTGGCGCTGGGGTTAAAACAGC ACAATATCATTGCATGTGATTCTAAAGGTGTCATCTATAAAGGCCGTGAAGCGAATATGGCCGAAACCAAAGCGGCCTAT GCTATCGATGATAACGGCCAGCGCACATTGGGGGATGTCATGCCGGGTAGCGATATTTTCCTCGGCTGCTCTGGCTCCGG TGTTTTAACGCCAGAGATGGTGAAAACCATGGCACCGAATCCGTTGATTCTGGCCCTGGCAAACCCGGAACCGGAAATCC TACCGCCGTTAGCCAAAGCGGTGCGTCCCGATGCAATTATTTGTACTGGCCGCTCGGATTACCCTAATCAGGTTAATAAC GTGCTGTGCTTCCCGTTTATCTTCCGTGGCGCGCTGGATGTCGGTGCCACCACCATTAATGAAGAGATGAAGCTGGCTTG TGTCCATGCTATTGCTGATCTGGCGCTGGCTGAGCAGAGTGATGTGGTGGCTTCCGCTTACGGGGAGCAAGACCTCTCCT TCGGCCCGGAATACATTATTCCTAAACCCTTCGATCCGCGCTTAATCGTAAAAATTGCCCCCGCAGTGGCCAAAGCGGCG ATGGCGTCAGGAGTGGCAACTCGCCCAATCACTGACTTCAATGCTTACGTCGAAAAACTGTCTGAGTTTGTCTACAAAAC CAACCTGTTTATGAAGCCAATCTTCTCGCAAGCGAAGAAAGAGATGAAACGGGTTGTGCTGGCGGAAGGGGAAGGGGAAG AGGAGCGGGTGCTTCATGCCACGCAAGAGCTGATTTCACAAGGGCTGGCTTATCCTATCTTGATTGGCCGCCCAAGCGTA ATTGAGACTCGGTTGAAAAAATTGGGCTTGCAAATCAGTGCCGGGAAAGATTTTGAAGTGGTCAATAATGAGTCCGATCC GCGCTTTAATGAATACTGGCACGAATATTATCAAATCATGAAACGTCGTGGTGTTTCGCAGGAACAGGCCCGCCGTGCGG TGATTGGTAATCCGACGCTGATTGGCTCAATCATGGTTCATCGCGGCGAGGCTGATGCGATGATTTGTGGCACCATCGGT ACCTATCACGAACACTACGATGTGGTCGAGAAAGTGTTTGGCTTCCGTGAAGGGGCGCATGTGGCTGGGGCGATGAATGC CTTGTTGCTGCCGAGCGGCAATACCTTTATCGCTGATACCTACGTTAATAACGATCCGACAGCGGAACAACTGGCAGAAA TTACTCTGATGGCAGCTGAAACCGTGCGCCGTTTTGGTATTGAGCCCAAAGTGGCGTTGTTGTCCCATTCCAGTTTCGGC ACATCAGATTGCCCGGCGGCCCGTAAAATGCGTCAGACGCTGGCGCTGGTGAATCAGATGGCACCGGAATTGGAAATTGA CGGTGAAATGCACGGTGACGCGGCACTGGTGGAGAGTATTCGCCATAACCTGATGCCAGATAGCCCACTGAAAGGTTCAG CGAATATCTTGATTATGCCGAACATGGAGGCTGCACGTATCAGCTACAACCTGTTGCGTGTCACGTCGTCAGAAGGGGTG ACCGTAGGCCCGGTCCTGATGGGAATAACGAAACCGGTCCATATTCTGACACCGATTGCGTCGGTGCGGCGGATTGTGAA TATGGTGGCGTTGGCGGTAGTGGAGGCGATTACTCTTCGTCCTTGA
Upstream 100 bases:
>100_bases GGTTCATAGATTGTGATAAATCACTCACTATACTGGTTCTGTTATTGGTCATACCTCTTCACTTCAATGCATAAGAACAT AAAAACAAAGGGAACCTACG
Downstream 100 bases:
>100_bases TGCCGCAGCTGTGTTAGCGGCGCTTACTTACCCGAATCACTTACCTGAGTAAGCTCATCGGGATGCGCTCGCTTGCTGCC TTGCTGCAACGCCAATGACG
Product: malic enzyme
Products: NA
Alternate protein names: NADP-ME [H]
Number of amino acids: Translated: 761; Mature: 761
Protein sequence:
>761_residues MDEQLKQSALDFHQFPVPGKIQVSPTKPLATQRDLALAYSPGVAAPCLEIAADPLAAYKYTARGNLVAVISNGTAVLGLG NIGALAGKPVMEGKGVLFKKFSGIDVFDIEVDELDPDKLIDIIASLEPTFGGINLEDIKAPECFYIEKKLRERMKIPVFH DDQHGTAIICTAAVLNGLRVVKKDISDVKLVVSGAGAASIACLNLLVALGLKQHNIIACDSKGVIYKGREANMAETKAAY AIDDNGQRTLGDVMPGSDIFLGCSGSGVLTPEMVKTMAPNPLILALANPEPEILPPLAKAVRPDAIICTGRSDYPNQVNN VLCFPFIFRGALDVGATTINEEMKLACVHAIADLALAEQSDVVASAYGEQDLSFGPEYIIPKPFDPRLIVKIAPAVAKAA MASGVATRPITDFNAYVEKLSEFVYKTNLFMKPIFSQAKKEMKRVVLAEGEGEEERVLHATQELISQGLAYPILIGRPSV IETRLKKLGLQISAGKDFEVVNNESDPRFNEYWHEYYQIMKRRGVSQEQARRAVIGNPTLIGSIMVHRGEADAMICGTIG TYHEHYDVVEKVFGFREGAHVAGAMNALLLPSGNTFIADTYVNNDPTAEQLAEITLMAAETVRRFGIEPKVALLSHSSFG TSDCPAARKMRQTLALVNQMAPELEIDGEMHGDAALVESIRHNLMPDSPLKGSANILIMPNMEAARISYNLLRVTSSEGV TVGPVLMGITKPVHILTPIASVRRIVNMVALAVVEAITLRP
Sequences:
>Translated_761_residues MDEQLKQSALDFHQFPVPGKIQVSPTKPLATQRDLALAYSPGVAAPCLEIAADPLAAYKYTARGNLVAVISNGTAVLGLG NIGALAGKPVMEGKGVLFKKFSGIDVFDIEVDELDPDKLIDIIASLEPTFGGINLEDIKAPECFYIEKKLRERMKIPVFH DDQHGTAIICTAAVLNGLRVVKKDISDVKLVVSGAGAASIACLNLLVALGLKQHNIIACDSKGVIYKGREANMAETKAAY AIDDNGQRTLGDVMPGSDIFLGCSGSGVLTPEMVKTMAPNPLILALANPEPEILPPLAKAVRPDAIICTGRSDYPNQVNN VLCFPFIFRGALDVGATTINEEMKLACVHAIADLALAEQSDVVASAYGEQDLSFGPEYIIPKPFDPRLIVKIAPAVAKAA MASGVATRPITDFNAYVEKLSEFVYKTNLFMKPIFSQAKKEMKRVVLAEGEGEEERVLHATQELISQGLAYPILIGRPSV IETRLKKLGLQISAGKDFEVVNNESDPRFNEYWHEYYQIMKRRGVSQEQARRAVIGNPTLIGSIMVHRGEADAMICGTIG TYHEHYDVVEKVFGFREGAHVAGAMNALLLPSGNTFIADTYVNNDPTAEQLAEITLMAAETVRRFGIEPKVALLSHSSFG TSDCPAARKMRQTLALVNQMAPELEIDGEMHGDAALVESIRHNLMPDSPLKGSANILIMPNMEAARISYNLLRVTSSEGV TVGPVLMGITKPVHILTPIASVRRIVNMVALAVVEAITLRP >Mature_761_residues MDEQLKQSALDFHQFPVPGKIQVSPTKPLATQRDLALAYSPGVAAPCLEIAADPLAAYKYTARGNLVAVISNGTAVLGLG NIGALAGKPVMEGKGVLFKKFSGIDVFDIEVDELDPDKLIDIIASLEPTFGGINLEDIKAPECFYIEKKLRERMKIPVFH DDQHGTAIICTAAVLNGLRVVKKDISDVKLVVSGAGAASIACLNLLVALGLKQHNIIACDSKGVIYKGREANMAETKAAY AIDDNGQRTLGDVMPGSDIFLGCSGSGVLTPEMVKTMAPNPLILALANPEPEILPPLAKAVRPDAIICTGRSDYPNQVNN VLCFPFIFRGALDVGATTINEEMKLACVHAIADLALAEQSDVVASAYGEQDLSFGPEYIIPKPFDPRLIVKIAPAVAKAA MASGVATRPITDFNAYVEKLSEFVYKTNLFMKPIFSQAKKEMKRVVLAEGEGEEERVLHATQELISQGLAYPILIGRPSV IETRLKKLGLQISAGKDFEVVNNESDPRFNEYWHEYYQIMKRRGVSQEQARRAVIGNPTLIGSIMVHRGEADAMICGTIG TYHEHYDVVEKVFGFREGAHVAGAMNALLLPSGNTFIADTYVNNDPTAEQLAEITLMAAETVRRFGIEPKVALLSHSSFG TSDCPAARKMRQTLALVNQMAPELEIDGEMHGDAALVESIRHNLMPDSPLKGSANILIMPNMEAARISYNLLRVTSSEGV TVGPVLMGITKPVHILTPIASVRRIVNMVALAVVEAITLRP
Specific function: Unknown
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family [H]
Homologues:
Organism=Homo sapiens, GI4505143, Length=390, Percent_Identity=25.6410256410256, Blast_Score=84, Evalue=7e-16, Organism=Homo sapiens, GI62420882, Length=369, Percent_Identity=27.3712737127371, Blast_Score=79, Evalue=2e-14, Organism=Homo sapiens, GI62420880, Length=369, Percent_Identity=27.3712737127371, Blast_Score=79, Evalue=2e-14, Organism=Homo sapiens, GI239049447, Length=369, Percent_Identity=27.3712737127371, Blast_Score=79, Evalue=2e-14, Organism=Homo sapiens, GI4505145, Length=378, Percent_Identity=25.9259259259259, Blast_Score=73, Evalue=8e-13, Organism=Homo sapiens, GI270265879, Length=325, Percent_Identity=27.6923076923077, Blast_Score=72, Evalue=2e-12, Organism=Escherichia coli, GI1788806, Length=758, Percent_Identity=83.9050131926121, Blast_Score=1323, Evalue=0.0, Organism=Escherichia coli, GI1788635, Length=348, Percent_Identity=29.0229885057471, Blast_Score=152, Evalue=6e-38, Organism=Escherichia coli, GI1788800, Length=311, Percent_Identity=32.7974276527331, Blast_Score=139, Evalue=5e-34, Organism=Caenorhabditis elegans, GI17537199, Length=407, Percent_Identity=27.027027027027, Blast_Score=70, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6322823, Length=274, Percent_Identity=28.1021897810219, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI281362674, Length=404, Percent_Identity=25.990099009901, Blast_Score=87, Evalue=4e-17, Organism=Drosophila melanogaster, GI281362672, Length=404, Percent_Identity=25.990099009901, Blast_Score=87, Evalue=4e-17, Organism=Drosophila melanogaster, GI21356279, Length=404, Percent_Identity=25.990099009901, Blast_Score=87, Evalue=6e-17, Organism=Drosophila melanogaster, GI24646388, Length=347, Percent_Identity=27.3775216138329, Blast_Score=74, Evalue=4e-13, Organism=Drosophila melanogaster, GI24646386, Length=347, Percent_Identity=27.3775216138329, Blast_Score=73, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR012188 - InterPro: IPR016040 - InterPro: IPR002505 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M; PF01515 PTA_PTB [H]
EC number: =1.1.1.40 [H]
Molecular weight: Translated: 82170; Mature: 82170
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: PS00331 MALIC_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEQLKQSALDFHQFPVPGKIQVSPTKPLATQRDLALAYSPGVAAPCLEIAADPLAAYKY CCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEECCCCCHHHHHHHCCCHHHEEE TARGNLVAVISNGTAVLGLGNIGALAGKPVMEGKGVLFKKFSGIDVFDIEVDELDPDKLI ECCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCHHHHH DIIASLEPTFGGINLEDIKAPECFYIEKKLRERMKIPVFHDDQHGTAIICTAAVLNGLRV HHHHHCCCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCEEECCCCCCEEEEHHHHHHHHHH VKKDISDVKLVVSGAGAASIACLNLLVALGLKQHNIIACDSKGVIYKGREANMAETKAAY HHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEECCCCCEEECCCCCCHHHCEEE AIDDNGQRTLGDVMPGSDIFLGCSGSGVLTPEMVKTMAPNPLILALANPEPEILPPLAKA EECCCCCEEHHCCCCCCCEEEEECCCCCCCHHHHHHCCCCCEEEEECCCCCCCCCHHHHH VRPDAIICTGRSDYPNQVNNVLCFPFIFRGALDVGATTINEEMKLACVHAIADLALAEQS CCCCEEEEECCCCCCHHHCCEEEHHHHHHHHHHCCCHHHCHHHHHHHHHHHHHHHHHCCC DVVASAYGEQDLSFGPEYIIPKPFDPRLIVKIAPAVAKAAMASGVATRPITDFNAYVEKL CHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCCHHHHHHHHHH SEFVYKTNLFMKPIFSQAKKEMKRVVLAEGEGEEERVLHATQELISQGLAYPILIGRPSV HHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHCCCCCEEEECCCHH IETRLKKLGLQISAGKDFEVVNNESDPRFNEYWHEYYQIMKRRGVSQEQARRAVIGNPTL HHHHHHHCCEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCE IGSIMVHRGEADAMICGTIGTYHEHYDVVEKVFGFREGAHVAGAMNALLLPSGNTFIADT EEEEEEECCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCHHHHHCCEEEECCCCEEEEEE YVNNDPTAEQLAEITLMAAETVRRFGIEPKVALLSHSSFGTSDCPAARKMRQTLALVNQM EECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHC APELEIDGEMHGDAALVESIRHNLMPDSPLKGSANILIMPNMEAARISYNLLRVTSSEGV CCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHEEEEEEEEECCCCC TVGPVLMGITKPVHILTPIASVRRIVNMVALAVVEAITLRP EECHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDEQLKQSALDFHQFPVPGKIQVSPTKPLATQRDLALAYSPGVAAPCLEIAADPLAAYKY CCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEECCCCCHHHHHHHCCCHHHEEE TARGNLVAVISNGTAVLGLGNIGALAGKPVMEGKGVLFKKFSGIDVFDIEVDELDPDKLI ECCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCHHHHH DIIASLEPTFGGINLEDIKAPECFYIEKKLRERMKIPVFHDDQHGTAIICTAAVLNGLRV HHHHHCCCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCEEECCCCCCEEEEHHHHHHHHHH VKKDISDVKLVVSGAGAASIACLNLLVALGLKQHNIIACDSKGVIYKGREANMAETKAAY HHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEECCCCCEEECCCCCCHHHCEEE AIDDNGQRTLGDVMPGSDIFLGCSGSGVLTPEMVKTMAPNPLILALANPEPEILPPLAKA EECCCCCEEHHCCCCCCCEEEEECCCCCCCHHHHHHCCCCCEEEEECCCCCCCCCHHHHH VRPDAIICTGRSDYPNQVNNVLCFPFIFRGALDVGATTINEEMKLACVHAIADLALAEQS CCCCEEEEECCCCCCHHHCCEEEHHHHHHHHHHCCCHHHCHHHHHHHHHHHHHHHHHCCC DVVASAYGEQDLSFGPEYIIPKPFDPRLIVKIAPAVAKAAMASGVATRPITDFNAYVEKL CHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCCHHHHHHHHHH SEFVYKTNLFMKPIFSQAKKEMKRVVLAEGEGEEERVLHATQELISQGLAYPILIGRPSV HHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHCCCCCEEEECCCHH IETRLKKLGLQISAGKDFEVVNNESDPRFNEYWHEYYQIMKRRGVSQEQARRAVIGNPTL HHHHHHHCCEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCE IGSIMVHRGEADAMICGTIGTYHEHYDVVEKVFGFREGAHVAGAMNALLLPSGNTFIADT EEEEEEECCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCHHHHHCCEEEECCCCEEEEEE YVNNDPTAEQLAEITLMAAETVRRFGIEPKVALLSHSSFGTSDCPAARKMRQTLALVNQM EECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHC APELEIDGEMHGDAALVESIRHNLMPDSPLKGSANILIMPNMEAARISYNLLRVTSSEGV CCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHEEEEEEEEECCCCC TVGPVLMGITKPVHILTPIASVRRIVNMVALAVVEAITLRP EECHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 36376 [H]