| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218930065
Identifier: 218930065
GI number: 218930065
Start: 3373184
End: 3373336
Strand: Reverse
Name: 218930065
Synonym: YPO3018
Alternate gene names: NA
Gene position: 3373336-3373184 (Counterclockwise)
Preceding gene: 218930066
Following gene: 218930064
Centisome position: 72.49
GC content: 41.83
Gene sequence:
>153_bases TTGACCTTTTTACCCGGTTTTCCGGGTTTTTTTATTGATCTTATCCCGTACACCTCCACCATTGATCTTCACGAAACAGG TCAACTATGTAATGATGCGCCTCAAATATATCATCCTGTCTGTCATTTTATTTCCCTTGAGGTGTCCGCGTGA
Upstream 100 bases:
>100_bases CGGTTCTGGTGCTATCAAAAAGGTGGTCGTGAAGGTTCATTATAGTCTTTTGAATAGCTAGCTATCTTTCTGATTTTATA TCATAAGAAAAACAGCGTTT
Downstream 100 bases:
>100_bases AAACTGGTGCTCCCCGTTTTAAGCCAGGTAAAATTCTTGATGCCTTGGGTGCGATGCAAAATAGCCTGACTCGTTCTGCT CAGCGTATTGCTGCGTATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 50; Mature: 49
Protein sequence:
>50_residues MTFLPGFPGFFIDLIPYTSTIDLHETGQLCNDAPQIYHPVCHFISLEVSA
Sequences:
>Translated_50_residues MTFLPGFPGFFIDLIPYTSTIDLHETGQLCNDAPQIYHPVCHFISLEVSA >Mature_49_residues TFLPGFPGFFIDLIPYTSTIDLHETGQLCNDAPQIYHPVCHFISLEVSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5597; Mature: 5466
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFLPGFPGFFIDLIPYTSTIDLHETGQLCNDAPQIYHPVCHFISLEVSA CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEECC >Mature Secondary Structure TFLPGFPGFFIDLIPYTSTIDLHETGQLCNDAPQIYHPVCHFISLEVSA CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA