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The map label for this gene is arnF

Identifier: 218929504

GI number: 218929504

Start: 2716582

End: 2716968

Strand: Reverse

Name: arnF

Synonym: YPO2416

Alternate gene names: 218929504

Gene position: 2716968-2716582 (Counterclockwise)

Preceding gene: 218929505

Following gene: 218929503

Centisome position: 58.38

GC content: 42.12

Gene sequence:

>387_bases
ATGAAAGGGTATCTGTGGGGGGGGGCAAGCGTCGTATTGGTCACGGTGGCACAGTTGGTGTTGAAGTGGGGTATGATGAA
TATTCCATTATTATCACTAGCCGATATTAATGTTCAATTCTTGACGATGTACTTCGTGCAATTAGCATCAGTAATGTGTG
GTTTGATGGGGTATGCTTTATCCATGTTATGTTGGTTTTTTGCCCTTAGATACTTGCCGCTAAATCGCGCTTACCCACTG
CTGAGCCTCAGTTACGCTTTGGTTTATCTGGGCGCTGTTTTATTACCTTGGTTTAACGAACCCGCGACCTTACTAAAAAC
ACTGGGGGCGGGTTTTATTTTATTAGGAATATGGCTGATTAATATAAAACCTATAAAAGCTAGCTAA

Upstream 100 bases:

>100_bases
CCTTGGCGGCACAACTATTTTACGGTGAAAAGGCCACTCTTCGGCATTGGTTGGGGGTTGCCGCTATTATGTTCGGTATC
TTGCTAATGAGTTGGCACCT

Downstream 100 bases:

>100_bases
TCTTATTTACTAACCCTATTAGTCTATTCATATAACTTGTTTTTTTCGAATCCGATAGCTAAATTAGCCGTAACGATGTA
CCACGCCAGCTAAATATATA

Product: hypothetical protein

Products: NA

Alternate protein names: L-Ara4N-phosphoundecaprenol flippase subunit ArnF; Undecaprenyl phosphate-aminoarabinose flippase subunit ArnF

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MKGYLWGGASVVLVTVAQLVLKWGMMNIPLLSLADINVQFLTMYFVQLASVMCGLMGYALSMLCWFFALRYLPLNRAYPL
LSLSYALVYLGAVLLPWFNEPATLLKTLGAGFILLGIWLINIKPIKAS

Sequences:

>Translated_128_residues
MKGYLWGGASVVLVTVAQLVLKWGMMNIPLLSLADINVQFLTMYFVQLASVMCGLMGYALSMLCWFFALRYLPLNRAYPL
LSLSYALVYLGAVLLPWFNEPATLLKTLGAGFILLGIWLINIKPIKAS
>Mature_128_residues
MKGYLWGGASVVLVTVAQLVLKWGMMNIPLLSLADINVQFLTMYFVQLASVMCGLMGYALSMLCWFFALRYLPLNRAYPL
LSLSYALVYLGAVLLPWFNEPATLLKTLGAGFILLGIWLINIKPIKAS

Specific function: Translocates 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ArnF family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ARNF_YERP3 (A7FHH8)

Other databases:

- EMBL:   CP000720
- RefSeq:   YP_001400706.1
- ProteinModelPortal:   A7FHH8
- STRING:   A7FHH8
- GeneID:   5387900
- GenomeReviews:   CP000720_GR
- KEGG:   ypi:YpsIP31758_1731
- eggNOG:   COG0697
- HOGENOM:   HBG682839
- OMA:   CWLAALR
- ProtClustDB:   PRK02971
- BioCyc:   YPSE349747:YPSIP31758_1731-MONOMER
- GO:   GO:0006810
- HAMAP:   MF_00538
- InterPro:   IPR000620
- InterPro:   IPR022832

Pfam domain/function: PF00892 DUF6

EC number: NA

Molecular weight: Translated: 14224; Mature: 14224

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x4cf3c360)-; HASH(0x4d15f3c8)-; HASH(0x4d160484)-; HASH(0x4d13889c)-;

Cys/Met content:

1.6 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGYLWGGASVVLVTVAQLVLKWGMMNIPLLSLADINVQFLTMYFVQLASVMCGLMGYAL
CCCEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
SMLCWFFALRYLPLNRAYPLLSLSYALVYLGAVLLPWFNEPATLLKTLGAGFILLGIWLI
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHH
NIKPIKAS
HCCCCCCH
>Mature Secondary Structure
MKGYLWGGASVVLVTVAQLVLKWGMMNIPLLSLADINVQFLTMYFVQLASVMCGLMGYAL
CCCEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
SMLCWFFALRYLPLNRAYPLLSLSYALVYLGAVLLPWFNEPATLLKTLGAGFILLGIWLI
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHH
NIKPIKAS
HCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA