| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is aroH [H]
Identifier: 218929501
GI number: 218929501
Start: 2711967
End: 2713013
Strand: Direct
Name: aroH [H]
Synonym: YPO2411
Alternate gene names: 218929501
Gene position: 2711967-2713013 (Clockwise)
Preceding gene: 218929500
Following gene: 218929523
Centisome position: 58.28
GC content: 50.53
Gene sequence:
>1047_bases ATGTACAAGATAGATGAACTGCGGACCGCTCGCATCGATAGCTTGATTACACCGCAGCAACTGGCTGAAAAGTTACCGAT TTCTGAGGTTATTGCAGATAACGTGACGGCGTCACGTAAACGAATAGAGAAAATACTTATTGGTGAAGACCCACGTCTAC TCGTGGTGATTGGCCCCTGCTCTATTCACGACCTTGATGCAGCCGTTGATTATGCCACCCGGCTCAAGGTGCTACGAGAA CGCTATCAAGACCGGCTGGAAATCGTGATGCGCACCTATTTCGAGAAACCACGGACTGTAGTGGGTTGGAAGGGGCTGAT TTCTGATCCGGCACTTGACGGCTCATGCCAGGTGAACTTGGGTATTGAACTGGCACGTAAGCTACTGTTAGCCGTGAATG AACTCGGGCTGCCGACCGCTACCGAGTTCCTCAATATGGTAACAGGCCAATATATTGCCGACCTCATCAGTTGGGGGGCA ATAGGCGCACGTACCACCGAAAGCCAGATCCACCGAGAGATGGCCTCGGCACTCTCCTGCCCCGTGGGTTTCAAAAATGG TACAGATGGCAATGTGCGTATTGCTATTGATGCCATTCGCGCCGCACAAGCCAGCCATATGTTCCTTTCTCCGGATAAAA CCGGCCAAATGACGATTTACCAAACCAGTGGTAACCCCTATGGGCATATTATTATGCGGGGTGGAAAGCAACCTAACTAT GATGCCTCTGATATCGCAGCCGCCTGTGACAGCTTGCGGGAATTTGATTTGCCAGAACATCTGGTGGTAGATTTTAGCCA CGGCAATTGCCAGAAGATGCATCGCCGCCAGTTGGATGTTGCCGAAAATATCGGGCTACAGATCCGTGCGGGTTCAACAG CGATTGTCGGTGTTATGGCTGAGAGTTTCCTGATTGAGGGCACACAGAAGATTGTTGCCGGACAGCCCTTAACTTATGGG CAATCCATCACTGACCCTTGCCTGAATTGGGATGATACTGAACAACTGTTAAGCCTATTGGCAGATGCAGTAGACAGCCG GTTTTAA
Upstream 100 bases:
>100_bases TACAGTGATGACGGTTGAATTCATGTGATTTTGGTTTATTGTGATCGCCATCACTTCCCGGTATTTCTGCCGCAGAGAAG AACAGATTTAGAGAGTTTTC
Downstream 100 bases:
>100_bases TTCATTCGCACGGGCTTTAATGAGTAAACCGTACATTAAATGAATACCTTCGGGATAGGGAAAAGTTAACGTTGTCGGGT TAACTTTTTCTATCCCTATT
Product: phospho-2-dehydro-3-deoxyheptonate aldolase
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MYKIDELRTARIDSLITPQQLAEKLPISEVIADNVTASRKRIEKILIGEDPRLLVVIGPCSIHDLDAAVDYATRLKVLRE RYQDRLEIVMRTYFEKPRTVVGWKGLISDPALDGSCQVNLGIELARKLLLAVNELGLPTATEFLNMVTGQYIADLISWGA IGARTTESQIHREMASALSCPVGFKNGTDGNVRIAIDAIRAAQASHMFLSPDKTGQMTIYQTSGNPYGHIIMRGGKQPNY DASDIAAACDSLREFDLPEHLVVDFSHGNCQKMHRRQLDVAENIGLQIRAGSTAIVGVMAESFLIEGTQKIVAGQPLTYG QSITDPCLNWDDTEQLLSLLADAVDSRF
Sequences:
>Translated_348_residues MYKIDELRTARIDSLITPQQLAEKLPISEVIADNVTASRKRIEKILIGEDPRLLVVIGPCSIHDLDAAVDYATRLKVLRE RYQDRLEIVMRTYFEKPRTVVGWKGLISDPALDGSCQVNLGIELARKLLLAVNELGLPTATEFLNMVTGQYIADLISWGA IGARTTESQIHREMASALSCPVGFKNGTDGNVRIAIDAIRAAQASHMFLSPDKTGQMTIYQTSGNPYGHIIMRGGKQPNY DASDIAAACDSLREFDLPEHLVVDFSHGNCQKMHRRQLDVAENIGLQIRAGSTAIVGVMAESFLIEGTQKIVAGQPLTYG QSITDPCLNWDDTEQLLSLLADAVDSRF >Mature_348_residues MYKIDELRTARIDSLITPQQLAEKLPISEVIADNVTASRKRIEKILIGEDPRLLVVIGPCSIHDLDAAVDYATRLKVLRE RYQDRLEIVMRTYFEKPRTVVGWKGLISDPALDGSCQVNLGIELARKLLLAVNELGLPTATEFLNMVTGQYIADLISWGA IGARTTESQIHREMASALSCPVGFKNGTDGNVRIAIDAIRAAQASHMFLSPDKTGQMTIYQTSGNPYGHIIMRGGKQPNY DASDIAAACDSLREFDLPEHLVVDFSHGNCQKMHRRQLDVAENIGLQIRAGSTAIVGVMAESFLIEGTQKIVAGQPLTYG QSITDPCLNWDDTEQLLSLLADAVDSRF
Specific function: Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) [H]
COG id: COG0722
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I DAHP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1787996, Length=348, Percent_Identity=80.1724137931034, Blast_Score=587, Evalue=1e-169, Organism=Escherichia coli, GI1786969, Length=346, Percent_Identity=58.3815028901734, Blast_Score=419, Evalue=1e-118, Organism=Escherichia coli, GI1788953, Length=326, Percent_Identity=52.4539877300613, Blast_Score=343, Evalue=1e-95, Organism=Saccharomyces cerevisiae, GI6319726, Length=349, Percent_Identity=46.4183381088825, Blast_Score=305, Evalue=1e-83, Organism=Saccharomyces cerevisiae, GI6320240, Length=353, Percent_Identity=44.1926345609065, Blast_Score=292, Evalue=6e-80,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006218 - InterPro: IPR006219 [H]
Pfam domain/function: PF00793 DAHP_synth_1 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 38310; Mature: 38310
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKIDELRTARIDSLITPQQLAEKLPISEVIADNVTASRKRIEKILIGEDPRLLVVIGPC CCCCHHHHHHHHHHCCCHHHHHHHCCHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCC SIHDLDAAVDYATRLKVLRERYQDRLEIVMRTYFEKPRTVVGWKGLISDPALDGSCQVNL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEEE GIELARKLLLAVNELGLPTATEFLNMVTGQYIADLISWGAIGARTTESQIHREMASALSC CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC PVGFKNGTDGNVRIAIDAIRAAQASHMFLSPDKTGQMTIYQTSGNPYGHIIMRGGKQPNY CCCCCCCCCCCEEEEEEEHHHHHCCCEEECCCCCCCEEEEEECCCCEEEEEEECCCCCCC DASDIAAACDSLREFDLPEHLVVDFSHGNCQKMHRRQLDVAENIGLQIRAGSTAIVGVMA CHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHHHH ESFLIEGTQKIVAGQPLTYGQSITDPCLNWDDTEQLLSLLADAVDSRF HHHHHHCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MYKIDELRTARIDSLITPQQLAEKLPISEVIADNVTASRKRIEKILIGEDPRLLVVIGPC CCCCHHHHHHHHHHCCCHHHHHHHCCHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCC SIHDLDAAVDYATRLKVLRERYQDRLEIVMRTYFEKPRTVVGWKGLISDPALDGSCQVNL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEEE GIELARKLLLAVNELGLPTATEFLNMVTGQYIADLISWGAIGARTTESQIHREMASALSC CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC PVGFKNGTDGNVRIAIDAIRAAQASHMFLSPDKTGQMTIYQTSGNPYGHIIMRGGKQPNY CCCCCCCCCCCEEEEEEEHHHHHCCCEEECCCCCCCEEEEEECCCCEEEEEEECCCCCCC DASDIAAACDSLREFDLPEHLVVDFSHGNCQKMHRRQLDVAENIGLQIRAGSTAIVGVMA CHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHHHH ESFLIEGTQKIVAGQPLTYGQSITDPCLNWDDTEQLLSLLADAVDSRF HHHHHHCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]