| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218929429
Identifier: 218929429
GI number: 218929429
Start: 2630107
End: 2630946
Strand: Direct
Name: 218929429
Synonym: YPO2337
Alternate gene names: NA
Gene position: 2630107-2630946 (Clockwise)
Preceding gene: 218929428
Following gene: 218929432
Centisome position: 56.52
GC content: 37.26
Gene sequence:
>840_bases ATGTATAAAATAAAAAAATTCTCTCAAATAACGGGGATCTCTGAATTTAATTTACGCTATTTTGACCAGATTGGTCTACT GCCAGCTGAACGTGATAATAGTCGTTATAGACTCTATCACCCACGGCAAATCGCCATGGCTCATTTGATTTTAAGTCTAC AAAAAGCACATGTTTCTAATGAAAAAATCAAGAGCATCTTGATGGATTACTCATCCCAAAATAGCCAGTCCGCATTATGT TACGCACAACATGCTATTGATGAGACGTTGCACCAATTAACATGTGCCAGACATTTCCTCACAACGCAAATTGAGCGTCA GATGCTCATCAATGACGCCAAACGTCGATTAAATAATCCATTTATTGAGGAAAGAAATATCGAACCGCTGGGGATATTCT CGATAAATACGCCTAACATTATCGATTTTTTTAAATATGTCTCTGAAGTATCAGGAAACCCGGATTGGTATTTACGTCAT CGCTACGGATTTATTGTTGAAAGAGAATCCATTCAAAAAAACAACTATAAATTAATGAATTTTTTCTGCAATGAGCCTAA TATAATCAATAAACATGGTGGGGATTTTCCAGCTGGAAGTTATTTTAGTGGTTTTTATAAAGGAAGTTTGGAAAATAACC CAGCGGTATCTAAACACCTATCGCAAGCGGATGATAACGGAATGAACCATTCGTCTAAGGTTATTATTGAACATATCAGT GGTCCAGCCACAGTTAAGTGCAAGAGTGAATTCCTGATTAAAGTGATGTATCCCTGCCATCATCAACTGGACGGGTCCCA CGAGACACCAACAGTATTGACTCCTTCATCAACAAATTAA
Upstream 100 bases:
>100_bases CGAATAGCCCACAATAAAAATAATTCGAGATTCAGGTAGGCGGCAAGAGATATAATCCATTTTCAAGTTAACCATGTTGT TGATATGAGTAAATTAGATT
Downstream 100 bases:
>100_bases GTATTTGCCTTATGCACTTCATGACCATGGTGTAGACGAGGAATAAGCATCAGATCATCCAGCATGGGCAAGTACTCAGA TACAGGTCGGGCAGATCGGT
Product: putative regulatory protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MYKIKKFSQITGISEFNLRYFDQIGLLPAERDNSRYRLYHPRQIAMAHLILSLQKAHVSNEKIKSILMDYSSQNSQSALC YAQHAIDETLHQLTCARHFLTTQIERQMLINDAKRRLNNPFIEERNIEPLGIFSINTPNIIDFFKYVSEVSGNPDWYLRH RYGFIVERESIQKNNYKLMNFFCNEPNIINKHGGDFPAGSYFSGFYKGSLENNPAVSKHLSQADDNGMNHSSKVIIEHIS GPATVKCKSEFLIKVMYPCHHQLDGSHETPTVLTPSSTN
Sequences:
>Translated_279_residues MYKIKKFSQITGISEFNLRYFDQIGLLPAERDNSRYRLYHPRQIAMAHLILSLQKAHVSNEKIKSILMDYSSQNSQSALC YAQHAIDETLHQLTCARHFLTTQIERQMLINDAKRRLNNPFIEERNIEPLGIFSINTPNIIDFFKYVSEVSGNPDWYLRH RYGFIVERESIQKNNYKLMNFFCNEPNIINKHGGDFPAGSYFSGFYKGSLENNPAVSKHLSQADDNGMNHSSKVIIEHIS GPATVKCKSEFLIKVMYPCHHQLDGSHETPTVLTPSSTN >Mature_279_residues MYKIKKFSQITGISEFNLRYFDQIGLLPAERDNSRYRLYHPRQIAMAHLILSLQKAHVSNEKIKSILMDYSSQNSQSALC YAQHAIDETLHQLTCARHFLTTQIERQMLINDAKRRLNNPFIEERNIEPLGIFSINTPNIIDFFKYVSEVSGNPDWYLRH RYGFIVERESIQKNNYKLMNFFCNEPNIINKHGGDFPAGSYFSGFYKGSLENNPAVSKHLSQADDNGMNHSSKVIIEHIS GPATVKCKSEFLIKVMYPCHHQLDGSHETPTVLTPSSTN
Specific function: Unknown
COG id: COG0789
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32120; Mature: 32120
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: PS50937 HTH_MERR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKIKKFSQITGISEFNLRYFDQIGLLPAERDNSRYRLYHPRQIAMAHLILSLQKAHVSN CCCCCCHHHHCCCCCCCHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCH EKIKSILMDYSSQNSQSALCYAQHAIDETLHQLTCARHFLTTQIERQMLINDAKRRLNNP HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FIEERNIEPLGIFSINTPNIIDFFKYVSEVSGNPDWYLRHRYGFIVERESIQKNNYKLMN CCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCEEEEHHHHCCCCEEEEE FFCNEPNIINKHGGDFPAGSYFSGFYKGSLENNPAVSKHLSQADDNGMNHSSKVIIEHIS EEECCCCEECCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECC GPATVKCKSEFLIKVMYPCHHQLDGSHETPTVLTPSSTN CCCEEEECHHEEEEEECCHHHCCCCCCCCCEEECCCCCC >Mature Secondary Structure MYKIKKFSQITGISEFNLRYFDQIGLLPAERDNSRYRLYHPRQIAMAHLILSLQKAHVSN CCCCCCHHHHCCCCCCCHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCH EKIKSILMDYSSQNSQSALCYAQHAIDETLHQLTCARHFLTTQIERQMLINDAKRRLNNP HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FIEERNIEPLGIFSINTPNIIDFFKYVSEVSGNPDWYLRHRYGFIVERESIQKNNYKLMN CCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCEEEEHHHHCCCCEEEEE FFCNEPNIINKHGGDFPAGSYFSGFYKGSLENNPAVSKHLSQADDNGMNHSSKVIIEHIS EEECCCCEECCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECC GPATVKCKSEFLIKVMYPCHHQLDGSHETPTVLTPSSTN CCCEEEECHHEEEEEECCHHHCCCCCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA