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The map label for this gene is ydbL [H]

Identifier: 218929418

GI number: 218929418

Start: 2616509

End: 2616880

Strand: Reverse

Name: ydbL [H]

Synonym: YPO2326

Alternate gene names: 218929418

Gene position: 2616880-2616509 (Counterclockwise)

Preceding gene: 218929419

Following gene: 218929416

Centisome position: 56.23

GC content: 51.08

Gene sequence:

>372_bases
ATGAAAAAGCATACTTTAGGCTGGATTGATGGGCGGCAAAGTCTGATCCGGCTTGCGTTGGGGTGTTTGGTGTTGACCAG
CAGTTTACTGTACAGCCCGCACTCGTTCGCTTTGACATTAGAACAGGCAAAACAACAAGGCCGGGTGGGAGAGACCTTGA
GTGGCTATTTAGCGCCGGTGAAAAAAGATGCAGAAACCTTGGCGCTGGTGGAGCAAATCAATCTTGCCAGAGCGGAGAAG
TATCAGGAAGTGGCGCAAAAAAACCATATCTCAACCGAGAATGTCGCCAAATTGGCGGGGCAGAAATTAGTCAACCGCGC
GGCGGAGGGCGAATATGTGCGCGGGATTAATGGCCAGTGGATGAAACGCTAA

Upstream 100 bases:

>100_bases
TAATATGAACGTCAAGATTGAGCATGAAATCCAGATAAGGGTCGATAAAGATGTGGAAGCATTGCTTAAAAATCAATCCA
ATCTCTTCTAAGGAACCATC

Downstream 100 bases:

>100_bases
ATCCTCCTGCCGATAATATCAGGGATAACACGTTGAACAATGGGCGGCTTCGTACCGGCCTGTAGTTCATTACTGCATTG
TAGTTCATTACTGCACTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MKKHTLGWIDGRQSLIRLALGCLVLTSSLLYSPHSFALTLEQAKQQGRVGETLSGYLAPVKKDAETLALVEQINLARAEK
YQEVAQKNHISTENVAKLAGQKLVNRAAEGEYVRGINGQWMKR

Sequences:

>Translated_123_residues
MKKHTLGWIDGRQSLIRLALGCLVLTSSLLYSPHSFALTLEQAKQQGRVGETLSGYLAPVKKDAETLALVEQINLARAEK
YQEVAQKNHISTENVAKLAGQKLVNRAAEGEYVRGINGQWMKR
>Mature_123_residues
MKKHTLGWIDGRQSLIRLALGCLVLTSSLLYSPHSFALTLEQAKQQGRVGETLSGYLAPVKKDAETLALVEQINLARAEK
YQEVAQKNHISTENVAKLAGQKLVNRAAEGEYVRGINGQWMKR

Specific function: Unknown

COG id: COG3784

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081895, Length=94, Percent_Identity=55.3191489361702, Blast_Score=110, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008309 [H]

Pfam domain/function: PF07027 DUF1318 [H]

EC number: NA

Molecular weight: Translated: 13646; Mature: 13646

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKHTLGWIDGRQSLIRLALGCLVLTSSLLYSPHSFALTLEQAKQQGRVGETLSGYLAPV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH
KKDAETLALVEQINLARAEKYQEVAQKNHISTENVAKLAGQKLVNRAAEGEYVRGINGQW
HCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCC
MKR
CCC
>Mature Secondary Structure
MKKHTLGWIDGRQSLIRLALGCLVLTSSLLYSPHSFALTLEQAKQQGRVGETLSGYLAPV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH
KKDAETLALVEQINLARAEKYQEVAQKNHISTENVAKLAGQKLVNRAAEGEYVRGINGQW
HCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCC
MKR
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]