| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is yceI [C]
Identifier: 218929407
GI number: 218929407
Start: 2604455
End: 2605033
Strand: Reverse
Name: yceI [C]
Synonym: YPO2315
Alternate gene names: 218929407
Gene position: 2605033-2604455 (Counterclockwise)
Preceding gene: 218929408
Following gene: 218929403
Centisome position: 55.98
GC content: 40.59
Gene sequence:
>579_bases ATGATTAATAAGACCCTGTTGGGCCTGAGTCTTGGCGCACTGATGTTTACCGCCGGTAGCGCTGTAGCTGCCGATTATAA AATCGATAAAGAAGGGCAACACGCTTTTATCGAATTCCGGATTAAACATTTAGGTTATAGCTGGTTATATGGCAGCTTTA ACGATTTTGATGGTTCTTTCACATTTGATGATAAAAATCCTGCAGCTGATAAAGTTAATGTAGTGATCAACACCAATAGC GTTGATACCAATCATGCTGAACGAGATAAACACCTACGCGGTAAAAGTTTTTTAAATGTTGCTAAATTCCCACAGGCAAC ATTTGAGTCAACTGAAGTGAAGAAAAATGGTGATGGTTATTCTGTTATCGGTAACCTGACGTTAAATGGAGTGACTAAAC CGGTGACGTTGGAAAGTAAACTGACAGGGCAGGGTAACGACCCATGGGGGGGTTATCGTGCTGGTTTTGAAGCCAACGGT AACATCAAGTTGAAAGATTTCAATATTACGACAGATTTAGGACCAGCTTCTCAAGAAGTCGAATTGATCCTGTCAGTAGA AGGTGTTCAGGTTAAATAA
Upstream 100 bases:
>100_bases TTAGCTGCACTTAAACATCACTTTATCGATGGTGATATTACCCTTAAACGGATGCTAGGACGTAGCATCGATTAACTTAC TGTATTATGGAGAATTTCGT
Downstream 100 bases:
>100_bases TAGAATTCAGTCACCTTATAAAAAGGAGCTTTGGCTCCTTTGAGGTTATTGACAAAGTGCCCGCGACGGAGAGAACAGGC AGATCGTAAAGACGCCGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MINKTLLGLSLGALMFTAGSAVAADYKIDKEGQHAFIEFRIKHLGYSWLYGSFNDFDGSFTFDDKNPAADKVNVVINTNS VDTNHAERDKHLRGKSFLNVAKFPQATFESTEVKKNGDGYSVIGNLTLNGVTKPVTLESKLTGQGNDPWGGYRAGFEANG NIKLKDFNITTDLGPASQEVELILSVEGVQVK
Sequences:
>Translated_192_residues MINKTLLGLSLGALMFTAGSAVAADYKIDKEGQHAFIEFRIKHLGYSWLYGSFNDFDGSFTFDDKNPAADKVNVVINTNS VDTNHAERDKHLRGKSFLNVAKFPQATFESTEVKKNGDGYSVIGNLTLNGVTKPVTLESKLTGQGNDPWGGYRAGFEANG NIKLKDFNITTDLGPASQEVELILSVEGVQVK >Mature_192_residues MINKTLLGLSLGALMFTAGSAVAADYKIDKEGQHAFIEFRIKHLGYSWLYGSFNDFDGSFTFDDKNPAADKVNVVINTNS VDTNHAERDKHLRGKSFLNVAKFPQATFESTEVKKNGDGYSVIGNLTLNGVTKPVTLESKLTGQGNDPWGGYRAGFEANG NIKLKDFNITTDLGPASQEVELILSVEGVQVK
Specific function: Unknown
COG id: COG2353
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0312 family. Type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787295, Length=191, Percent_Identity=78.5340314136126, Blast_Score=319, Evalue=8e-89,
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007372 [H]
Pfam domain/function: PF04264 YceI [H]
EC number: NA
Molecular weight: Translated: 20910; Mature: 20910
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINKTLLGLSLGALMFTAGSAVAADYKIDKEGQHAFIEFRIKHLGYSWLYGSFNDFDGSF CCCCEEHHHHHHHHHHCCCCCEEECEEECCCCCEEEEEEEEECCCEEEEECCCCCCCCEE TFDDKNPAADKVNVVINTNSVDTNHAERDKHLRGKSFLNVAKFPQATFESTEVKKNGDGY EECCCCCCCCEEEEEEECCCCCCCCCHHHHHCCCCHHEEHHHCCCCCCCCCEEEECCCCE SVIGNLTLNGVTKPVTLESKLTGQGNDPWGGYRAGFEANGNIKLKDFNITTDLGPASQEV EEEEEEEECCCCCCEEEEEEECCCCCCCCCCEECCEECCCCEEEEEEEEEECCCCCCCCE ELILSVEGVQVK EEEEEECCEEEC >Mature Secondary Structure MINKTLLGLSLGALMFTAGSAVAADYKIDKEGQHAFIEFRIKHLGYSWLYGSFNDFDGSF CCCCEEHHHHHHHHHHCCCCCEEECEEECCCCCEEEEEEEEECCCEEEEECCCCCCCCEE TFDDKNPAADKVNVVINTNSVDTNHAERDKHLRGKSFLNVAKFPQATFESTEVKKNGDGY EECCCCCCCCEEEEEEECCCCCCCCCHHHHHCCCCHHEEHHHCCCCCCCCCEEEECCCCE SVIGNLTLNGVTKPVTLESKLTGQGNDPWGGYRAGFEANGNIKLKDFNITTDLGPASQEV EEEEEEEECCCCCCEEEEEEECCCCCCCCCCEECCEECCCCEEEEEEEEEECCCCCCCCE ELILSVEGVQVK EEEEEECCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA