| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218929405
Identifier: 218929405
GI number: 218929405
Start: 2603272
End: 2603628
Strand: Direct
Name: 218929405
Synonym: YPO2313
Alternate gene names: NA
Gene position: 2603272-2603628 (Clockwise)
Preceding gene: 218929404
Following gene: 218929409
Centisome position: 55.94
GC content: 39.78
Gene sequence:
>357_bases GTGCCCCATAAGTTGTTACGTGGTGATTTTTCTCTCCCCTTCACCAGTCCAAAAGGGAAAAATGGCATGAGTGAAGATGT AAATATGGGAAATCTTCATCATTTTGGGAAAACGATCGTCAACAGTTTAAATAAAGAGATTAACGCAGAGGGATATGCTG GCGGTAAATTGGTCTGGCATAACGATGAAGCTGGAAATCCATTTAGCCCTGGATTTGATGAGAATGACAAACCAATTTTC TTCCTCCCATCAGGAGGTATGTTCCAGGCAAAAAATAAAAGTGAATTGCTTGGTTTTTATTCCAGATTGCGGAGGAGTGG ATACACTCCAGAACATAGTCCAATTTTTGGTTTTTAA
Upstream 100 bases:
>100_bases TTGGAGAGAGAAAAAGCAATAGTTCCCCCATAACAGCCGATTACGATTTGTTTGCAATTATCCAAGTGTTAATCAGTCAG TTAATGAAAGACCCCTGACA
Downstream 100 bases:
>100_bases GTTGTAGTTAAGCATTACTAACCGAAAGATAGTTATATTCAGAAATGGATATAACTATCCTAAAAAATTCACACGCTAAG CCCCTCCCGATGTAAGCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MPHKLLRGDFSLPFTSPKGKNGMSEDVNMGNLHHFGKTIVNSLNKEINAEGYAGGKLVWHNDEAGNPFSPGFDENDKPIF FLPSGGMFQAKNKSELLGFYSRLRRSGYTPEHSPIFGF
Sequences:
>Translated_118_residues MPHKLLRGDFSLPFTSPKGKNGMSEDVNMGNLHHFGKTIVNSLNKEINAEGYAGGKLVWHNDEAGNPFSPGFDENDKPIF FLPSGGMFQAKNKSELLGFYSRLRRSGYTPEHSPIFGF >Mature_117_residues PHKLLRGDFSLPFTSPKGKNGMSEDVNMGNLHHFGKTIVNSLNKEINAEGYAGGKLVWHNDEAGNPFSPGFDENDKPIFF LPSGGMFQAKNKSELLGFYSRLRRSGYTPEHSPIFGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13120; Mature: 12989
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHKLLRGDFSLPFTSPKGKNGMSEDVNMGNLHHFGKTIVNSLNKEINAEGYAGGKLVWH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEC NDEAGNPFSPGFDENDKPIFFLPSGGMFQAKNKSELLGFYSRLRRSGYTPEHSPIFGF CCCCCCCCCCCCCCCCCEEEEECCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure PHKLLRGDFSLPFTSPKGKNGMSEDVNMGNLHHFGKTIVNSLNKEINAEGYAGGKLVWH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEC NDEAGNPFSPGFDENDKPIFFLPSGGMFQAKNKSELLGFYSRLRRSGYTPEHSPIFGF CCCCCCCCCCCCCCCCCEEEEECCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA