| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218929388
Identifier: 218929388
GI number: 218929388
Start: 2581241
End: 2582626
Strand: Reverse
Name: 218929388
Synonym: YPO2296
Alternate gene names: NA
Gene position: 2582626-2581241 (Counterclockwise)
Preceding gene: 218929389
Following gene: 218929387
Centisome position: 55.5
GC content: 47.69
Gene sequence:
>1386_bases ATGCATTGTCCTGATGCCTTCTCCCAACTTTTCCAGCAGCGCTATCGGGATAAATACGGCGATGGCTTTATCCTGCCCGT CAATAAAACCAAACTACATGTTTTCTACCGTCCTGCTTCCGCAGGATTAATGGGGCAAGAGTTCATCCAGCAGATGGGTG AGTTACCCAACGTGGCAGTATGTAAAGCCAATAGAGATAAGCTGCGGCCATTAATTGAAGCATGTCAGAACGATCTCGAG GCTTATAACCGCTTTGTGAGTTTGAATCCTAAGAAAAAAGCAGCATTAGAAGGGCTGTTACTTCTCCCGATGCCGTTGTG GCCAGAGGCATTAAACGCTGAGCTGGAAAGTATTAAAAGCCGAGTGGGCTATGGCTTACTGTTGATAACATTGGATGAAC TTTTTGCCCAACTCAGCCATGCCTGCGCATCAAACCCACCAGAACGTTTATCCCGCAATGTGGTCATTGCGCTGACTCAG GCGTTGGCATCCTTGCAGGTTGGTATAGAGCCTGATGTTCGGGCAGATAATCGTACACCAACCTTGCAAGATACAGTTGC TCTGTTTCCTATTGAGTCCGCGACGGCGGAGTCGGCAACCTTTGCTGTCTACCGTATCACGATGTTAGCCGTCGAGTTGG CTTGTGCCGCAGTGATGGTTGATGGCCGAGTTGGGGAACCCGAATCGATGATTTTGACGCGGCATATTGATGCCTGGAGC TACCTTAGCCCTGGTCAACGTATGCGTCTGAAAGCCTATCTTCAACCGGGGGTCAGGAAGAATAATACGTTGTTGGCCTT GAAAAATAACCTTGAGCCGCTATCGCTTGAACATCGCCGTGCTATTGCCCGTTTCCTGGCACACCTGATTCAGGTCGAAG GGACCATTACCCCACAAGATGTGAAATTTCTTGAGCGGGTATATAAGCGTTTTGCCCTAGACAGCAAACTGGTTTATACC GATCTTGATAGCCGTGCGACCCCGATGACATTAAGTTTGCCGCCACCAGGTTCCGTAGCACTAAATAGTGTTGATCGCAT TACGCTACTGAAAAATGAAAGTCAGGAATTGGTGGCGCTGTTGGAGAATTTATTTCTAACCAAAGTGGTGGCGACAGAGG ATAAAGAAGAGATTGATCCACAATCAATGGCGGCAATAATGGCTGATATGCAGGAAGGAACCGTGACGCTCCTACGATTA CTGATTTCACGCAATGCATGGGAGCGTGATAAATTAACCGATATCGCGCTGGACATGGAAATCAGACTGGACGATATACT GATTGAGATTAATCGCAAGATATTGGCTGTTTTTGACGTACCGCTGATTACTGGCGATGCGGTTATTTCAATTAATCGTG ATGTCTCGGCTGCATTATTGGCCTGA
Upstream 100 bases:
>100_bases TTGGCTTAGGGCAATTGGCTGTGGACCAACGGCCATTACCTGCAGAGTGGGCCTGTGCGTGGGGGGGGCGGATCCAGCCA TTAACCAAAACAGATCATTG
Downstream 100 bases:
>100_bases TAAGCAGACAGTTGATTAATAAATATAGGCTCAATAAACATAGTCTTAATAAACATCGGCAGCGTAACTTGAGCTCAAAC GCAATAATCGCTACCATAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 461; Mature: 461
Protein sequence:
>461_residues MHCPDAFSQLFQQRYRDKYGDGFILPVNKTKLHVFYRPASAGLMGQEFIQQMGELPNVAVCKANRDKLRPLIEACQNDLE AYNRFVSLNPKKKAALEGLLLLPMPLWPEALNAELESIKSRVGYGLLLITLDELFAQLSHACASNPPERLSRNVVIALTQ ALASLQVGIEPDVRADNRTPTLQDTVALFPIESATAESATFAVYRITMLAVELACAAVMVDGRVGEPESMILTRHIDAWS YLSPGQRMRLKAYLQPGVRKNNTLLALKNNLEPLSLEHRRAIARFLAHLIQVEGTITPQDVKFLERVYKRFALDSKLVYT DLDSRATPMTLSLPPPGSVALNSVDRITLLKNESQELVALLENLFLTKVVATEDKEEIDPQSMAAIMADMQEGTVTLLRL LISRNAWERDKLTDIALDMEIRLDDILIEINRKILAVFDVPLITGDAVISINRDVSAALLA
Sequences:
>Translated_461_residues MHCPDAFSQLFQQRYRDKYGDGFILPVNKTKLHVFYRPASAGLMGQEFIQQMGELPNVAVCKANRDKLRPLIEACQNDLE AYNRFVSLNPKKKAALEGLLLLPMPLWPEALNAELESIKSRVGYGLLLITLDELFAQLSHACASNPPERLSRNVVIALTQ ALASLQVGIEPDVRADNRTPTLQDTVALFPIESATAESATFAVYRITMLAVELACAAVMVDGRVGEPESMILTRHIDAWS YLSPGQRMRLKAYLQPGVRKNNTLLALKNNLEPLSLEHRRAIARFLAHLIQVEGTITPQDVKFLERVYKRFALDSKLVYT DLDSRATPMTLSLPPPGSVALNSVDRITLLKNESQELVALLENLFLTKVVATEDKEEIDPQSMAAIMADMQEGTVTLLRL LISRNAWERDKLTDIALDMEIRLDDILIEINRKILAVFDVPLITGDAVISINRDVSAALLA >Mature_461_residues MHCPDAFSQLFQQRYRDKYGDGFILPVNKTKLHVFYRPASAGLMGQEFIQQMGELPNVAVCKANRDKLRPLIEACQNDLE AYNRFVSLNPKKKAALEGLLLLPMPLWPEALNAELESIKSRVGYGLLLITLDELFAQLSHACASNPPERLSRNVVIALTQ ALASLQVGIEPDVRADNRTPTLQDTVALFPIESATAESATFAVYRITMLAVELACAAVMVDGRVGEPESMILTRHIDAWS YLSPGQRMRLKAYLQPGVRKNNTLLALKNNLEPLSLEHRRAIARFLAHLIQVEGTITPQDVKFLERVYKRFALDSKLVYT DLDSRATPMTLSLPPPGSVALNSVDRITLLKNESQELVALLENLFLTKVVATEDKEEIDPQSMAAIMADMQEGTVTLLRL LISRNAWERDKLTDIALDMEIRLDDILIEINRKILAVFDVPLITGDAVISINRDVSAALLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51380; Mature: 51380
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHCPDAFSQLFQQRYRDKYGDGFILPVNKTKLHVFYRPASAGLMGQEFIQQMGELPNVAV CCCHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEECCCCCCCHHHHHHHHHCCCCCEEE CKANRDKLRPLIEACQNDLEAYNRFVSLNPKKKAALEGLLLLPMPLWPEALNAELESIKS ECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCEEEECCCCCHHHHHHHHHHHHH RVGYGLLLITLDELFAQLSHACASNPPERLSRNVVIALTQALASLQVGIEPDVRADNRTP HHCCEEEEEEHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCC TLQDTVALFPIESATAESATFAVYRITMLAVELACAAVMVDGRVGEPESMILTRHIDAWS CHHHCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEEECCCCC YLSPGQRMRLKAYLQPGVRKNNTLLALKNNLEPLSLEHRRAIARFLAHLIQVEGTITPQD CCCCCHHEEHHEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHH VKFLERVYKRFALDSKLVYTDLDSRATPMTLSLPPPGSVALNSVDRITLLKNESQELVAL HHHHHHHHHHHCCCCCEEEEECCCCCCCEEEECCCCCCHHHCCCCEEEEECCCHHHHHHH LENLFLTKVVATEDKEEIDPQSMAAIMADMQEGTVTLLRLLISRNAWERDKLTDIALDME HHHHHHHHHHHCCCHHHCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHEEEEEEE IRLDDILIEINRKILAVFDVPLITGDAVISINRDVSAALLA EEHHHHHHHHCCEEEEEEECCEECCCEEEEECCCCHHHHCC >Mature Secondary Structure MHCPDAFSQLFQQRYRDKYGDGFILPVNKTKLHVFYRPASAGLMGQEFIQQMGELPNVAV CCCHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEECCCCCCCHHHHHHHHHCCCCCEEE CKANRDKLRPLIEACQNDLEAYNRFVSLNPKKKAALEGLLLLPMPLWPEALNAELESIKS ECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCEEEECCCCCHHHHHHHHHHHHH RVGYGLLLITLDELFAQLSHACASNPPERLSRNVVIALTQALASLQVGIEPDVRADNRTP HHCCEEEEEEHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCC TLQDTVALFPIESATAESATFAVYRITMLAVELACAAVMVDGRVGEPESMILTRHIDAWS CHHHCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEEECCCCC YLSPGQRMRLKAYLQPGVRKNNTLLALKNNLEPLSLEHRRAIARFLAHLIQVEGTITPQD CCCCCHHEEHHEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHH VKFLERVYKRFALDSKLVYTDLDSRATPMTLSLPPPGSVALNSVDRITLLKNESQELVAL HHHHHHHHHHHCCCCCEEEEECCCCCCCEEEECCCCCCHHHCCCCEEEEECCCHHHHHHH LENLFLTKVVATEDKEEIDPQSMAAIMADMQEGTVTLLRLLISRNAWERDKLTDIALDME HHHHHHHHHHHCCCHHHCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHEEEEEEE IRLDDILIEINRKILAVFDVPLITGDAVISINRDVSAALLA EEHHHHHHHHCCEEEEEEECCEECCCEEEEECCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA