| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
Click here to switch to the map view.
The map label for this gene is amn [H]
Identifier: 218929380
GI number: 218929380
Start: 2567955
End: 2569595
Strand: Reverse
Name: amn [H]
Synonym: YPO2288
Alternate gene names: 218929380
Gene position: 2569595-2567955 (Counterclockwise)
Preceding gene: 218929384
Following gene: 218929376
Centisome position: 55.22
GC content: 49.42
Gene sequence:
>1641_bases TTGAATAAATTACAAGATACAGGCTCTCTCGCAGTTGTTGAGGCCATTGATAAGCTGGAAATGCTCTATGATGCAGCGTT AGCCGCTTTACGGGATGCGATCAGCGCATTTATTCGTGATGGTTCTTTGCCTAATGCAGCGGAAAGATCCAAGGGGTTAT TTAGCTACCCACAGCTTAGTGTCCGATGGGATGGTAAATTTAGCGATCATCACCGCACGCGTGCATACGGGCGCTTTTCC CGGGCAGGGCAATACAGCACCACAATCACTCGACCCGCACTGTTCAGGGAATATCTGACCGAGCAAATGACGCTGCTTGA AAGTGAGTATGGCGCGGTATTTGAAGTGACACCGTCACAACAAGAGATGCCTTATCCGTTTGTTATCGATGGTTCAGACC TGATCCTTGATCGGTCAATGACCGCAGGCCTTGCCCAGCACTTCCCGACGACAGATCTGGCTAAAATCGGTGATGGCATC ACCGACGGAATTGAAACGATAGCGCTTGGCACGGCATCACTTGGCAGCGCAGTAAGTGATCTACCGTTGTCTCACTTTGA TGCGCTGCGCACTGATTTTTCCCTCGCACGGTTAAAACACTATACCGGTACGCCAGCCGAAGACATTCAACCGTATATTC TTTTTACCAATTACAGCCGTTATGTTGATGAATTTGTCCGTTGGGCGGGTGAGCAAATTTTGGATCCAAACAGCCCCTAT AAAGCACTCTCCTGCGCAGGCGGTAGTTACATCACGGCAGAGAATGCCGATCCGGAAAAAACCCTTTCTGACCTGGCGTG GAAAAAACATCAGATGCCAGCCTATCACCTGATAGCCAAAAATGGGCAGGGCATCACATTGGTTAATATTGGTGTCGGCC CCTCCAATGCCAAAACAATTTGTGACCACTTGGCGGTATTGAGGCCACATGTTTGGTTGATGATTGGCCACTGTGGTGGC CTGCGAGAAAGCCAATCCATTGGTGATTATGTGCTGGCACATGCGTACTTGCGTGATGACCATGTTCTGGATGCGGTATT ACCGCCCGATATTCCGATCCCTAGCATTGCCGAGATACAACGCGCCTTGTACGACGCGACCAAAGCCGTTAGTGGTATGC CAGGCGTTGAGGTAAAACAACGTCTGCGCACCGGGACTGTCGTTACCTCTGATGATCGTAACTGGGAATTACGTTTCTCC GCCTCATCGCTACGTTTTAGTTTAAGTCGCGCGGTGGCTGTTGATATGGAAAGCGCCACTATCGCCGCTCAAGGCTATCG CTTCCGGGTGCCTTACGGGACCTTGCTTTGTGTTTCCGACAAGCCATTACATGGCGAAATTAAACTGCCGGGGCAGGCCA ACCATTTTTATGAGGGGGCTATTTCTGAGCATTTGCAGATTGGTATTCGGGCAATCGATTTGATAGGGGGATCGAGCGCT AAAATCCGCGCTATGGCAACACGTTGTCGCATCCCCCCCGACAAATCTTTTGGGTACCGTGTGCGAAACTCACTTAAACC CAGTGTATTCAGTAAATCTTCAACGACAGACTGGCATTTTTCTTTTGACTCTCCTTTAATGTCCATGCCGAATGCTATAT TTTTCTCCACATTCATCCATGGAAACAGCGCATATTCTTGA
Upstream 100 bases:
>100_bases CAAAAGGTCCTCCTGTTTTCAGGAAAAGGCTGGATTTGCTGCGCAATAAATAGCACTGTGTTGGTCAATAATCGCTGCTC TTGTGTTTAAAGGAGGTACT
Downstream 100 bases:
>100_bases AACACCATTCCTCTATCGGTACCGGGTTCAGTAACGACGTGACCTTTAACGATAATTTCCCCCTGCGTTGGCAGAGAAAA ACCGGCGATAGCATTGAGTA
Product: AMP nucleosidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 546; Mature: 546
Protein sequence:
>546_residues MNKLQDTGSLAVVEAIDKLEMLYDAALAALRDAISAFIRDGSLPNAAERSKGLFSYPQLSVRWDGKFSDHHRTRAYGRFS RAGQYSTTITRPALFREYLTEQMTLLESEYGAVFEVTPSQQEMPYPFVIDGSDLILDRSMTAGLAQHFPTTDLAKIGDGI TDGIETIALGTASLGSAVSDLPLSHFDALRTDFSLARLKHYTGTPAEDIQPYILFTNYSRYVDEFVRWAGEQILDPNSPY KALSCAGGSYITAENADPEKTLSDLAWKKHQMPAYHLIAKNGQGITLVNIGVGPSNAKTICDHLAVLRPHVWLMIGHCGG LRESQSIGDYVLAHAYLRDDHVLDAVLPPDIPIPSIAEIQRALYDATKAVSGMPGVEVKQRLRTGTVVTSDDRNWELRFS ASSLRFSLSRAVAVDMESATIAAQGYRFRVPYGTLLCVSDKPLHGEIKLPGQANHFYEGAISEHLQIGIRAIDLIGGSSA KIRAMATRCRIPPDKSFGYRVRNSLKPSVFSKSSTTDWHFSFDSPLMSMPNAIFFSTFIHGNSAYS
Sequences:
>Translated_546_residues MNKLQDTGSLAVVEAIDKLEMLYDAALAALRDAISAFIRDGSLPNAAERSKGLFSYPQLSVRWDGKFSDHHRTRAYGRFS RAGQYSTTITRPALFREYLTEQMTLLESEYGAVFEVTPSQQEMPYPFVIDGSDLILDRSMTAGLAQHFPTTDLAKIGDGI TDGIETIALGTASLGSAVSDLPLSHFDALRTDFSLARLKHYTGTPAEDIQPYILFTNYSRYVDEFVRWAGEQILDPNSPY KALSCAGGSYITAENADPEKTLSDLAWKKHQMPAYHLIAKNGQGITLVNIGVGPSNAKTICDHLAVLRPHVWLMIGHCGG LRESQSIGDYVLAHAYLRDDHVLDAVLPPDIPIPSIAEIQRALYDATKAVSGMPGVEVKQRLRTGTVVTSDDRNWELRFS ASSLRFSLSRAVAVDMESATIAAQGYRFRVPYGTLLCVSDKPLHGEIKLPGQANHFYEGAISEHLQIGIRAIDLIGGSSA KIRAMATRCRIPPDKSFGYRVRNSLKPSVFSKSSTTDWHFSFDSPLMSMPNAIFFSTFIHGNSAYS >Mature_546_residues MNKLQDTGSLAVVEAIDKLEMLYDAALAALRDAISAFIRDGSLPNAAERSKGLFSYPQLSVRWDGKFSDHHRTRAYGRFS RAGQYSTTITRPALFREYLTEQMTLLESEYGAVFEVTPSQQEMPYPFVIDGSDLILDRSMTAGLAQHFPTTDLAKIGDGI TDGIETIALGTASLGSAVSDLPLSHFDALRTDFSLARLKHYTGTPAEDIQPYILFTNYSRYVDEFVRWAGEQILDPNSPY KALSCAGGSYITAENADPEKTLSDLAWKKHQMPAYHLIAKNGQGITLVNIGVGPSNAKTICDHLAVLRPHVWLMIGHCGG LRESQSIGDYVLAHAYLRDDHVLDAVLPPDIPIPSIAEIQRALYDATKAVSGMPGVEVKQRLRTGTVVTSDDRNWELRFS ASSLRFSLSRAVAVDMESATIAAQGYRFRVPYGTLLCVSDKPLHGEIKLPGQANHFYEGAISEHLQIGIRAIDLIGGSSA KIRAMATRCRIPPDKSFGYRVRNSLKPSVFSKSSTTDWHFSFDSPLMSMPNAIFFSTFIHGNSAYS
Specific function: Involved in regulation of AMP concentrations [H]
COG id: COG0775
COG function: function code F; Nucleoside phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788293, Length=486, Percent_Identity=71.3991769547325, Blast_Score=721, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011271 - InterPro: IPR018953 - InterPro: IPR018017 - InterPro: IPR000845 [H]
Pfam domain/function: PF10423 AMNp_N; PF01048 PNP_UDP_1 [H]
EC number: =3.2.2.4 [H]
Molecular weight: Translated: 60102; Mature: 60102
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLQDTGSLAVVEAIDKLEMLYDAALAALRDAISAFIRDGSLPNAAERSKGLFSYPQLS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCEE VRWDGKFSDHHRTRAYGRFSRAGQYSTTITRPALFREYLTEQMTLLESEYGAVFEVTPSQ EEECCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCC QEMPYPFVIDGSDLILDRSMTAGLAQHFPTTDLAKIGDGITDGIETIALGTASLGSAVSD CCCCCCEEECCCCEEEECHHHHHHHHHCCCCHHHHHCCCHHHHHHHHEECCHHHHHHHHH LPLSHFDALRTDFSLARLKHYTGTPAEDIQPYILFTNYSRYVDEFVRWAGEQILDPNSPY CCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCEEEEECHHHHHHHHHHHCCHHHCCCCCCC KALSCAGGSYITAENADPEKTLSDLAWKKHQMPAYHLIAKNGQGITLVNIGVGPSNAKTI CEEEECCCCEEEECCCCHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEEECCCCCCHHHH CDHLAVLRPHVWLMIGHCGGLRESQSIGDYVLAHAYLRDDHVLDAVLPPDIPIPSIAEIQ HHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHH RALYDATKAVSGMPGVEVKQRLRTGTVVTSDDRNWELRFSASSLRFSLSRAVAVDMESAT HHHHHHHHHHCCCCCHHHHHHHHCCCEEECCCCCEEEEEEHHHHHHEEHHEEEEECCCCE IAAQGYRFRVPYGTLLCVSDKPLHGEIKLPGQANHFYEGAISEHLQIGIRAIDLIGGSSA EEECCEEEECCCCEEEEECCCCCCCEEECCCCCCCHHHHHHHHHHHHCEEEEEEECCCCC KIRAMATRCRIPPDKSFGYRVRNSLKPSVFSKSSTTDWHFSFDSPLMSMPNAIFFSTFIH EEEEHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEECCCCHHHCCCCEEEEEEEC GNSAYS CCCCCC >Mature Secondary Structure MNKLQDTGSLAVVEAIDKLEMLYDAALAALRDAISAFIRDGSLPNAAERSKGLFSYPQLS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCEE VRWDGKFSDHHRTRAYGRFSRAGQYSTTITRPALFREYLTEQMTLLESEYGAVFEVTPSQ EEECCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCC QEMPYPFVIDGSDLILDRSMTAGLAQHFPTTDLAKIGDGITDGIETIALGTASLGSAVSD CCCCCCEEECCCCEEEECHHHHHHHHHCCCCHHHHHCCCHHHHHHHHEECCHHHHHHHHH LPLSHFDALRTDFSLARLKHYTGTPAEDIQPYILFTNYSRYVDEFVRWAGEQILDPNSPY CCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCEEEEECHHHHHHHHHHHCCHHHCCCCCCC KALSCAGGSYITAENADPEKTLSDLAWKKHQMPAYHLIAKNGQGITLVNIGVGPSNAKTI CEEEECCCCEEEECCCCHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEEECCCCCCHHHH CDHLAVLRPHVWLMIGHCGGLRESQSIGDYVLAHAYLRDDHVLDAVLPPDIPIPSIAEIQ HHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHH RALYDATKAVSGMPGVEVKQRLRTGTVVTSDDRNWELRFSASSLRFSLSRAVAVDMESAT HHHHHHHHHHCCCCCHHHHHHHHCCCEEECCCCCEEEEEEHHHHHHEEHHEEEEECCCCE IAAQGYRFRVPYGTLLCVSDKPLHGEIKLPGQANHFYEGAISEHLQIGIRAIDLIGGSSA EEECCEEEECCCCEEEEECCCCCCCEEECCCCCCCHHHHHHHHHHHHCEEEEEEECCCCC KIRAMATRCRIPPDKSFGYRVRNSLKPSVFSKSSTTDWHFSFDSPLMSMPNAIFFSTFIH EEEEHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEECCCCHHHCCCCEEEEEEEC GNSAYS CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]