| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218929367
Identifier: 218929367
GI number: 218929367
Start: 2557164
End: 2557415
Strand: Direct
Name: 218929367
Synonym: YPO2276
Alternate gene names: NA
Gene position: 2557164-2557415 (Clockwise)
Preceding gene: 218929366
Following gene: 218929368
Centisome position: 54.95
GC content: 37.3
Gene sequence:
>252_bases ATGGATACATCAGGTTTCGATATTCAGTTTGATAATCATATTCCTGAAAATGGTTACCGTATTGAAGGTTATTTATGTAA TGCGAACAATGCAAAAGAATGTCAGGCAATAATGGTACGTTCTGAACCATTTCATCAAATTGATTATTCTGCTATGGGAA ATTACTGGACATTAGGTTTTGGCTCTGTCCTGCTGCTCTGGCTTTTTTCTGTAGGTGTGGGACAGGTAATAAAGATGGTT CGTACTGCTTGA
Upstream 100 bases:
>100_bases AGATACCTGTATATGTTCGCGTCTGGTCAATGGAGGGGAGGGAAGGAGTAACTTATAACATTTCATCAGATGGCGGCATT ACTGAAATAAAAGGCTGATT
Downstream 100 bases:
>100_bases ATGCGAACCTTTTAAAATGTAATGGAGATAGAGTTATGTTTAAAAAAATCGTTAGTTTTCTGGCTGTACCTGCATTAATG GCAGTTTCTGGCGCGACTTT
Product: putative phage-related membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 83; Mature: 83
Protein sequence:
>83_residues MDTSGFDIQFDNHIPENGYRIEGYLCNANNAKECQAIMVRSEPFHQIDYSAMGNYWTLGFGSVLLLWLFSVGVGQVIKMV RTA
Sequences:
>Translated_83_residues MDTSGFDIQFDNHIPENGYRIEGYLCNANNAKECQAIMVRSEPFHQIDYSAMGNYWTLGFGSVLLLWLFSVGVGQVIKMV RTA >Mature_83_residues MDTSGFDIQFDNHIPENGYRIEGYLCNANNAKECQAIMVRSEPFHQIDYSAMGNYWTLGFGSVLLLWLFSVGVGQVIKMV RTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9381; Mature: 9381
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTSGFDIQFDNHIPENGYRIEGYLCNANNAKECQAIMVRSEPFHQIDYSAMGNYWTLGF CCCCCCEEEECCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCHHHCCCEEEEHH GSVLLLWLFSVGVGQVIKMVRTA HHHHHHHHHHCCHHHHHHHHHCC >Mature Secondary Structure MDTSGFDIQFDNHIPENGYRIEGYLCNANNAKECQAIMVRSEPFHQIDYSAMGNYWTLGF CCCCCCEEEECCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCHHHCCCEEEEHH GSVLLLWLFSVGVGQVIKMVRTA HHHHHHHHHHCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA