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The map label for this gene is ybdD [C]

Identifier: 218929330

GI number: 218929330

Start: 2507891

End: 2508196

Strand: Reverse

Name: ybdD [C]

Synonym: YPO2233

Alternate gene names: 218929330

Gene position: 2508196-2507891 (Counterclockwise)

Preceding gene: 218929331

Following gene: 218929328

Centisome position: 53.9

GC content: 56.21

Gene sequence:

>306_bases
GTGGTTAACTCTGGTATTCCGTACCGCTCCCGGCCAATAACCGGGGGGAAGATTACTCGCTGCGTGCCACTTACTCAGGT
CGAAGCAGCCCCAACCACGCTGTGGGCATGGGTACGGCTGATTACACATCGGCTGGCGCAAAGCTTCAGGCTGATGGTTG
GGGTGCAGGATTACAGTAATTATGTCAATCATATGCGCCATAAGCATCCTGACACCCCCCCAATGACTGAGCGGGAGTTC
CATCGTTATTGCCTGGATGCCCGCTTCCCCAGCGAAGGGGGAAAACTGGGGAAATGCCCGTGCTAG

Upstream 100 bases:

>100_bases
ACGATGCTAGTTTCTGCCTTCTTTGTGATTCGTCGCGCACTGAAATCCAGCAAACCAACAACCCATGAAACTGAAATTGT
ATACCGTGAGGAGGTCGCCC

Downstream 100 bases:

>100_bases
AGTGGCAATAGACATAAATTAGTGACACCGTAACGCCCTATAGTGATTTTATAGGGCGTTATTCTTTTACCGCTCATTGT
TACTGTCTGTAACTTCTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MVNSGIPYRSRPITGGKITRCVPLTQVEAAPTTLWAWVRLITHRLAQSFRLMVGVQDYSNYVNHMRHKHPDTPPMTEREF
HRYCLDARFPSEGGKLGKCPC

Sequences:

>Translated_101_residues
MVNSGIPYRSRPITGGKITRCVPLTQVEAAPTTLWAWVRLITHRLAQSFRLMVGVQDYSNYVNHMRHKHPDTPPMTEREF
HRYCLDARFPSEGGKLGKCPC
>Mature_101_residues
MVNSGIPYRSRPITGGKITRCVPLTQVEAAPTTLWAWVRLITHRLAQSFRLMVGVQDYSNYVNHMRHKHPDTPPMTEREF
HRYCLDARFPSEGGKLGKCPC

Specific function: Unknown

COG id: COG2879

COG function: function code S; Uncharacterized small protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081761, Length=50, Percent_Identity=54, Blast_Score=60, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11583; Mature: 11583

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNSGIPYRSRPITGGKITRCVPLTQVEAAPTTLWAWVRLITHRLAQSFRLMVGVQDYSN
CCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVNHMRHKHPDTPPMTEREFHRYCLDARFPSEGGKLGKCPC
HHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVNSGIPYRSRPITGGKITRCVPLTQVEAAPTTLWAWVRLITHRLAQSFRLMVGVQDYSN
CCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVNHMRHKHPDTPPMTEREFHRYCLDARFPSEGGKLGKCPC
HHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA