| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218929317
Identifier: 218929317
GI number: 218929317
Start: 2495346
End: 2496203
Strand: Direct
Name: 218929317
Synonym: YPO2220
Alternate gene names: NA
Gene position: 2495346-2496203 (Clockwise)
Preceding gene: 218929316
Following gene: 218929318
Centisome position: 53.62
GC content: 34.27
Gene sequence:
>858_bases ATGTTTCCTCACCTCACTGATTTTGTATCACTCAGTATCCTTACACCGATTAAAAATGATGCTAAAGAAACTCCTGTTGA ACCAAATGATATAATTATTATTGTTAATAATGCCGATAAGGAGGAAAACAATCCACAATATGTGGTACTGGATAATGGAA TTAGACAAGCAATGATAGATAAAACCACAAATCACTATGATAAAGAGTCACTTACTCACTTGGCTAGTACCTATCCACTT GTTGAAATCGGTGTGCGTGATAGGTTACAGGAAATAAAATCACCACTGCAGTTTCCCTATTCTGTGGATATTAATGTAGA AGATAAATCAGAAAATGGGGTAGTGATTCATCAACATATTGTTTATGCATATAGTTCTGGAGGCCATGGTAGTACAAGCA GTCCAGCTCAGAATTGTACTCAAGTGAATAAACCACTCATTGACATTTATTGCCAGATTGATGTGCCAGGGGATAATAAT TTATTACACAATCTGGATATCAAGTTGTCTATAAAACTCAATGAAGAAATTGGCTTCTCTTTAAATAAAATATTTAACCC TTATGATATTCTACGCAATATATGGGGGAATGTCATAAAACTATATGAAGAGAATAAAATTGATAATAACATTACCGATT CAGATATGAATTTTGATGATGACGAATGGGTAAGTGATGAAGATATTGCCCTGTTGGAGGAGTTTTCTAAGCAAAAAAAT AATATTGAAGAGCCACATAAAAAACTAGAGTTGGTATATCCAGAGAATCAAGAGCTTGAGTGGGATGATGATTTTGACCT GCTCCCCATTGATTATTTCAAATCAGATGCCGAGGAGTATGATCTCTCCTTACATTAA
Upstream 100 bases:
>100_bases TTTACTGATTAATCGGTAAAAATTGAAAGTTATTACAATTTTTTAGGTCTATTATTTCACTCCGCATTAAATAGAAGTAT TAATTATAAATGGAGCTGAT
Downstream 100 bases:
>100_bases CAATATAAGTATAAAAATATTCCAAGGGTGCTAAACATAGCCTCATTATAATTACCGTAGCTTATCGTCATCTTAGGTGA TACCTATCACTATGAACGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MFPHLTDFVSLSILTPIKNDAKETPVEPNDIIIIVNNADKEENNPQYVVLDNGIRQAMIDKTTNHYDKESLTHLASTYPL VEIGVRDRLQEIKSPLQFPYSVDINVEDKSENGVVIHQHIVYAYSSGGHGSTSSPAQNCTQVNKPLIDIYCQIDVPGDNN LLHNLDIKLSIKLNEEIGFSLNKIFNPYDILRNIWGNVIKLYEENKIDNNITDSDMNFDDDEWVSDEDIALLEEFSKQKN NIEEPHKKLELVYPENQELEWDDDFDLLPIDYFKSDAEEYDLSLH
Sequences:
>Translated_285_residues MFPHLTDFVSLSILTPIKNDAKETPVEPNDIIIIVNNADKEENNPQYVVLDNGIRQAMIDKTTNHYDKESLTHLASTYPL VEIGVRDRLQEIKSPLQFPYSVDINVEDKSENGVVIHQHIVYAYSSGGHGSTSSPAQNCTQVNKPLIDIYCQIDVPGDNN LLHNLDIKLSIKLNEEIGFSLNKIFNPYDILRNIWGNVIKLYEENKIDNNITDSDMNFDDDEWVSDEDIALLEEFSKQKN NIEEPHKKLELVYPENQELEWDDDFDLLPIDYFKSDAEEYDLSLH >Mature_285_residues MFPHLTDFVSLSILTPIKNDAKETPVEPNDIIIIVNNADKEENNPQYVVLDNGIRQAMIDKTTNHYDKESLTHLASTYPL VEIGVRDRLQEIKSPLQFPYSVDINVEDKSENGVVIHQHIVYAYSSGGHGSTSSPAQNCTQVNKPLIDIYCQIDVPGDNN LLHNLDIKLSIKLNEEIGFSLNKIFNPYDILRNIWGNVIKLYEENKIDNNITDSDMNFDDDEWVSDEDIALLEEFSKQKN NIEEPHKKLELVYPENQELEWDDDFDLLPIDYFKSDAEEYDLSLH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32782; Mature: 32782
Theoretical pI: Translated: 4.11; Mature: 4.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFPHLTDFVSLSILTPIKNDAKETPVEPNDIIIIVNNADKEENNPQYVVLDNGIRQAMID CCCCHHHHHHHEEECCCCCCHHHCCCCCCCEEEEEECCCCCCCCCCEEEEECCHHHHHHH KTTNHYDKESLTHLASTYPLVEIGVRDRLQEIKSPLQFPYSVDINVEDKSENGVVIHQHI HHCCCCCHHHHHHHHHCCCEEEECHHHHHHHHHHHHCCCEEEEEEEECCCCCCEEEEEEE VYAYSSGGHGSTSSPAQNCTQVNKPLIDIYCQIDVPGDNNLLHNLDIKLSIKLNEEIGFS EEEECCCCCCCCCCCHHHHHHHCCCEEEEEEEEECCCCCCEEEEEEEEEEEEECCCCCCH LNKIFNPYDILRNIWGNVIKLYEENKIDNNITDSDMNFDDDEWVSDEDIALLEEFSKQKN HHHCCCHHHHHHHHHHHHEEHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC NIEEPHKKLELVYPENQELEWDDDFDLLPIDYFKSDAEEYDLSLH CCCCHHHEEEEECCCCCCCCCCCCCCEEEHHHHHCCHHHCCCCCC >Mature Secondary Structure MFPHLTDFVSLSILTPIKNDAKETPVEPNDIIIIVNNADKEENNPQYVVLDNGIRQAMID CCCCHHHHHHHEEECCCCCCHHHCCCCCCCEEEEEECCCCCCCCCCEEEEECCHHHHHHH KTTNHYDKESLTHLASTYPLVEIGVRDRLQEIKSPLQFPYSVDINVEDKSENGVVIHQHI HHCCCCCHHHHHHHHHCCCEEEECHHHHHHHHHHHHCCCEEEEEEEECCCCCCEEEEEEE VYAYSSGGHGSTSSPAQNCTQVNKPLIDIYCQIDVPGDNNLLHNLDIKLSIKLNEEIGFS EEEECCCCCCCCCCCHHHHHHHCCCEEEEEEEEECCCCCCEEEEEEEEEEEEECCCCCCH LNKIFNPYDILRNIWGNVIKLYEENKIDNNITDSDMNFDDDEWVSDEDIALLEEFSKQKN HHHCCCHHHHHHHHHHHHEEHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC NIEEPHKKLELVYPENQELEWDDDFDLLPIDYFKSDAEEYDLSLH CCCCHHHEEEEECCCCCCCCCCCCCCEEEHHHHHCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA