| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218929219
Identifier: 218929219
GI number: 218929219
Start: 2384719
End: 2385639
Strand: Direct
Name: 218929219
Synonym: YPO2116
Alternate gene names: NA
Gene position: 2384719-2385639 (Clockwise)
Preceding gene: 218929218
Following gene: 218929220
Centisome position: 51.24
GC content: 50.05
Gene sequence:
>921_bases ATGGGCTTTGCACTTCCAAACGGGGCAGGTATTTACCTGGCTAAAACATATGAAACAGAAGTGGCGGTAACGGCAGTTTC CAATGCTGTTGACGCAGTTCTGACTGTAGCTACAGGGCATGACATCGCAGAAGGCGATATTGTGCAACTTACGTCCAGTT GGGGCGCTCTGAATGATCTGGCTGCCAAAGTGACGGCATCAACAACGACTTCGCTAACCCTCGGTTCAATTGATACATCC AATACTGACCGTTTTGCTGTAGGTGGCGGTGTAGGGACGGTTAAGAAGATCGCAAGTTGGATTGAAATCCCGCAAATCAC CGAAGTGGCTAACAGCGGCGGCGATCAACAGATGATTCAGATTCAATTTCTGAGCGATACCCGTCAGCGCAACCTCAACA CGTTTAAAGCTGCACAGTCTCAAACCCTGACGCTGGCGCATGATTACAGTCAGCCGGTTTATCCGGTATTGCGTGCGGCT GATGAGTCAGAGCAAACACTGGCAACCTACATGTATGTGCCTAAAGCCAAAGAAAATCGCTACTCAACGGTTAAAGTGTC ATTTAACGATATCCCGACCACGGCAATCAATGCCATCGAAACAGTGGCGGTGGTATTCAACCTGCAATCTCAAGCCATGA CCTTCTATAAGGCTGGGATAGCAGTGCCTGTTACTGGTGTCACGTTGAATAAAACTACGACTATTCTTGCCGTGGCTGCC ACTGAAACCTTGACGGCAACCGTAGCGCCAGCTAATGCGACTAACAAATCAGGTGCCTGGTCATCCTCCGCACCAACCAA AGCTACTGTTGACCCAGTAACTGGCGTTGTAACCGGCGTTGCCGCAGGCAGTGTCAATATCATTTACACCACGGCAGATG GCGCGAAAACCGCTACTTGCGCCGTCACAGTAACCGCATAA
Upstream 100 bases:
>100_bases CGATCAGTATGAGTTATCGCGCTGACGTTATCTAAACATCAATCAATCCAACACCACCGGCCTATGCCGGTTTTTTTATA TCCAAAATCGGAGAATTACT
Downstream 100 bases:
>100_bases GGAACATGACTCATGGCAGTAAAATTTACGCTGGTACCGTCGCCAACATTTAAAGTTGACGTCACTATCCCTCGCGCTGG TCTGGATGACGGTATTTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: Tail Protein; Phage Associated Protein; Phage Protein
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MGFALPNGAGIYLAKTYETEVAVTAVSNAVDAVLTVATGHDIAEGDIVQLTSSWGALNDLAAKVTASTTTSLTLGSIDTS NTDRFAVGGGVGTVKKIASWIEIPQITEVANSGGDQQMIQIQFLSDTRQRNLNTFKAAQSQTLTLAHDYSQPVYPVLRAA DESEQTLATYMYVPKAKENRYSTVKVSFNDIPTTAINAIETVAVVFNLQSQAMTFYKAGIAVPVTGVTLNKTTTILAVAA TETLTATVAPANATNKSGAWSSSAPTKATVDPVTGVVTGVAAGSVNIIYTTADGAKTATCAVTVTA
Sequences:
>Translated_306_residues MGFALPNGAGIYLAKTYETEVAVTAVSNAVDAVLTVATGHDIAEGDIVQLTSSWGALNDLAAKVTASTTTSLTLGSIDTS NTDRFAVGGGVGTVKKIASWIEIPQITEVANSGGDQQMIQIQFLSDTRQRNLNTFKAAQSQTLTLAHDYSQPVYPVLRAA DESEQTLATYMYVPKAKENRYSTVKVSFNDIPTTAINAIETVAVVFNLQSQAMTFYKAGIAVPVTGVTLNKTTTILAVAA TETLTATVAPANATNKSGAWSSSAPTKATVDPVTGVVTGVAAGSVNIIYTTADGAKTATCAVTVTA >Mature_305_residues GFALPNGAGIYLAKTYETEVAVTAVSNAVDAVLTVATGHDIAEGDIVQLTSSWGALNDLAAKVTASTTTSLTLGSIDTSN TDRFAVGGGVGTVKKIASWIEIPQITEVANSGGDQQMIQIQFLSDTRQRNLNTFKAAQSQTLTLAHDYSQPVYPVLRAAD ESEQTLATYMYVPKAKENRYSTVKVSFNDIPTTAINAIETVAVVFNLQSQAMTFYKAGIAVPVTGVTLNKTTTILAVAAT ETLTATVAPANATNKSGAWSSSAPTKATVDPVTGVVTGVAAGSVNIIYTTADGAKTATCAVTVTA
Specific function: Unknown
COG id: COG5492
COG function: function code N; Bacterial surface proteins containing Ig-like domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31683; Mature: 31552
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFALPNGAGIYLAKTYETEVAVTAVSNAVDAVLTVATGHDIAEGDIVQLTSSWGALNDL CCCCCCCCCEEEEEEEECCEEEEEEHHHHHEEEEEEECCCCCCCCCEEEEECCCCCHHHH AAKVTASTTTSLTLGSIDTSNTDRFAVGGGVGTVKKIASWIEIPQITEVANSGGDQQMIQ HHEEEECCCCEEEEECCCCCCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHCCCCCEEEE IQFLSDTRQRNLNTFKAAQSQTLTLAHDYSQPVYPVLRAADESEQTLATYMYVPKAKENR EEEECCHHHCCCCHHHHCCCCEEEEEECCCCCHHHHHHCCCCCCCEEEEEEEECCCCCCC YSTVKVSFNDIPTTAINAIETVAVVFNLQSQAMTFYKAGIAVPVTGVTLNKTTTILAVAA EEEEEEEECCCCCHHHHHHHEEEEEEECCHHHEEEECCCEEEEEEEEEECCCEEEEEEEE TETLTATVAPANATNKSGAWSSSAPTKATVDPVTGVVTGVAAGSVNIIYTTADGAKTATC CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEECCCCCEEEE AVTVTA EEEEEC >Mature Secondary Structure GFALPNGAGIYLAKTYETEVAVTAVSNAVDAVLTVATGHDIAEGDIVQLTSSWGALNDL CCCCCCCCEEEEEEEECCEEEEEEHHHHHEEEEEEECCCCCCCCCEEEEECCCCCHHHH AAKVTASTTTSLTLGSIDTSNTDRFAVGGGVGTVKKIASWIEIPQITEVANSGGDQQMIQ HHEEEECCCCEEEEECCCCCCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHCCCCCEEEE IQFLSDTRQRNLNTFKAAQSQTLTLAHDYSQPVYPVLRAADESEQTLATYMYVPKAKENR EEEECCHHHCCCCHHHHCCCCEEEEEECCCCCHHHHHHCCCCCCCEEEEEEEECCCCCCC YSTVKVSFNDIPTTAINAIETVAVVFNLQSQAMTFYKAGIAVPVTGVTLNKTTTILAVAA EEEEEEEECCCCCHHHHHHHEEEEEEECCHHHEEEECCCEEEEEEEEEECCCEEEEEEEE TETLTATVAPANATNKSGAWSSSAPTKATVDPVTGVVTGVAAGSVNIIYTTADGAKTATC CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEECCCCCEEEE AVTVTA EEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA