| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218929209
Identifier: 218929209
GI number: 218929209
Start: 2374643
End: 2375092
Strand: Direct
Name: 218929209
Synonym: YPO2102
Alternate gene names: NA
Gene position: 2374643-2375092 (Clockwise)
Preceding gene: 218929208
Following gene: 218929210
Centisome position: 51.03
GC content: 47.33
Gene sequence:
>450_bases ATGGCTGCCTTAAAACCGGATGTGAAAGCCTTCATCATTCAAGCATTGGCGTGCTTCGATACCTTGTCGATGGTGGCTGA AGCTGTCCAAAAAGAATTTGGGATTAAAGTTACCCATCAGCAGGTTGAATCGCATGACCCGACAAAAGTTAGCGGGAAGG GCTTAGCTAAGAAATGGGTTGAACTATTTACCATCACGCGTGAACGCTTCCAGACCGAAATAGCAAGCATTCCAATAGCA AATAAGGCCTATCGCCTACGGGCTTTGGATCGCATGGCCGCCGCTACTGAAAAACAAAAAAACTTCGGAATGACTGCCCA GCTAATGGAGCAGGCCGCGAAAGAGGTTGGTGATGCTTACACAAATAGGCAGAAGGTTGAGCACTCAGGCGGGGTGGCTA TTAGCTCAGTAGCATCAGTAATGGATGAAATAGGAGATGATGACCTGTAA
Upstream 100 bases:
>100_bases CAAACCTGCGGAGGTAGCCCATCTTAACGTAGCCAGGGCGTGTGGAACATGCCTATTAAAACTGGCTTAACTTTGGATTG CTTTGGATGAATGGTGATTT
Downstream 100 bases:
>100_bases GGAGTGGCTGTGTTAACTGATAAACAGAAAAAGCTGCTAAAGAACAGGTTCTGGCGTCTTAATCATCTTTACAAAATCAA AGACAAAAATGGGAAGTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: Phage-Like Protein
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MAALKPDVKAFIIQALACFDTLSMVAEAVQKEFGIKVTHQQVESHDPTKVSGKGLAKKWVELFTITRERFQTEIASIPIA NKAYRLRALDRMAAATEKQKNFGMTAQLMEQAAKEVGDAYTNRQKVEHSGGVAISSVASVMDEIGDDDL
Sequences:
>Translated_149_residues MAALKPDVKAFIIQALACFDTLSMVAEAVQKEFGIKVTHQQVESHDPTKVSGKGLAKKWVELFTITRERFQTEIASIPIA NKAYRLRALDRMAAATEKQKNFGMTAQLMEQAAKEVGDAYTNRQKVEHSGGVAISSVASVMDEIGDDDL >Mature_148_residues AALKPDVKAFIIQALACFDTLSMVAEAVQKEFGIKVTHQQVESHDPTKVSGKGLAKKWVELFTITRERFQTEIASIPIAN KAYRLRALDRMAAATEKQKNFGMTAQLMEQAAKEVGDAYTNRQKVEHSGGVAISSVASVMDEIGDDDL
Specific function: Unknown
COG id: COG5556
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16344; Mature: 16213
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAALKPDVKAFIIQALACFDTLSMVAEAVQKEFGIKVTHQQVESHDPTKVSGKGLAKKWV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHH ELFTITRERFQTEIASIPIANKAYRLRALDRMAAATEKQKNFGMTAQLMEQAAKEVGDAY HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH TNRQKVEHSGGVAISSVASVMDEIGDDDL HHHHHHHHCCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure AALKPDVKAFIIQALACFDTLSMVAEAVQKEFGIKVTHQQVESHDPTKVSGKGLAKKWV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHH ELFTITRERFQTEIASIPIANKAYRLRALDRMAAATEKQKNFGMTAQLMEQAAKEVGDAY HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH TNRQKVEHSGGVAISSVASVMDEIGDDDL HHHHHHHHCCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA