Definition Yersinia pestis CO92 chromosome, complete genome.
Accession NC_003143
Length 4,653,728

Click here to switch to the map view.

The map label for this gene is 218929207

Identifier: 218929207

GI number: 218929207

Start: 2372723

End: 2373520

Strand: Direct

Name: 218929207

Synonym: YPO2100

Alternate gene names: NA

Gene position: 2372723-2373520 (Clockwise)

Preceding gene: 218929206

Following gene: 218929208

Centisome position: 50.99

GC content: 48.12

Gene sequence:

>798_bases
TTGAGGAACCGGCTGGCTGTCGGATGCCTTCTGAGGGCCGTATTCCTGTGCGAACAAGGTTCATCACTAAAAGGTATATC
CGATATGAAAAGTATGATCGCAATTGAGCAGGAAGCATCCATGACTAGCTTGGACTTTCTGAGGAATATAATTAACCCAG
CCCGAATTGAATACGGGGAACCTGAAGTGGAAAATCGCCACTTTCTTTCTCGTATTGAAGATGAAATTGACGACTTAGGG
GTCGCGGAAAACTTTTACGTGACCACCGGGCAAGGTGCCAGCCGAGCGGTTAAGGGCTACATGCTCAATATGGAGCAGAT
GACGCTTATCGGTATGCGTGAATCCAAAGCAGTTCGCCGTTCTGTGCTGGCAAAGCTCAAGGTAATGCATTGCCCAGTCA
TCCCCCAAAGCTTACCAGAAGCACTTCGACTTGCTGCTGACTTGGCAGAGCATAATGCCAAATTGAAAAATGAGTTGGCT
GTCGCTGCTCCAAAGGCTGATTTCGTTGATAACTACGTCAATGCATCCGGTTCATTTGGCTTCCGTGAGGCTTGCAAACT
ACTGAAGGCGAAAGAACCAGAGTTCAGGGCTTTCTTGATTGCTTCTAATGTTATGTACGTTCTTGGTGGGAAAATGACGC
CTCGCGCTCCGCATATTGATGCAGGCCGATTCACTGTAAAGACAGGTGAGAACCTTAACAACGGGCATGCATTTACCCAG
GCTAAATTCACACCGAAGGGTATTCAGTGGATCGCTGGACTGTGGGCATCGTGGCAGTTGAATAATCAGGCAGCATGA

Upstream 100 bases:

>100_bases
CAAAGAACATGAAGGCTCAGTTTAACGACTGGGCCTTTTTTATTGGCAGTAAATCCAGCGCATCGCAGCGCAAATCACTC
AGAACCTTTCAGGATGACCC

Downstream 100 bases:

>100_bases
CCGGCTCAAAAATGAGCCCGTTGATAATAGTTGATAATAAAGACAAATTGAGAGCTACTTTCACAACAGCTCTCAATCAA
CTAAAAGCATTCTGCTATTA

Product: phage regulatory protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MRNRLAVGCLLRAVFLCEQGSSLKGISDMKSMIAIEQEASMTSLDFLRNIINPARIEYGEPEVENRHFLSRIEDEIDDLG
VAENFYVTTGQGASRAVKGYMLNMEQMTLIGMRESKAVRRSVLAKLKVMHCPVIPQSLPEALRLAADLAEHNAKLKNELA
VAAPKADFVDNYVNASGSFGFREACKLLKAKEPEFRAFLIASNVMYVLGGKMTPRAPHIDAGRFTVKTGENLNNGHAFTQ
AKFTPKGIQWIAGLWASWQLNNQAA

Sequences:

>Translated_265_residues
MRNRLAVGCLLRAVFLCEQGSSLKGISDMKSMIAIEQEASMTSLDFLRNIINPARIEYGEPEVENRHFLSRIEDEIDDLG
VAENFYVTTGQGASRAVKGYMLNMEQMTLIGMRESKAVRRSVLAKLKVMHCPVIPQSLPEALRLAADLAEHNAKLKNELA
VAAPKADFVDNYVNASGSFGFREACKLLKAKEPEFRAFLIASNVMYVLGGKMTPRAPHIDAGRFTVKTGENLNNGHAFTQ
AKFTPKGIQWIAGLWASWQLNNQAA
>Mature_265_residues
MRNRLAVGCLLRAVFLCEQGSSLKGISDMKSMIAIEQEASMTSLDFLRNIINPARIEYGEPEVENRHFLSRIEDEIDDLG
VAENFYVTTGQGASRAVKGYMLNMEQMTLIGMRESKAVRRSVLAKLKVMHCPVIPQSLPEALRLAADLAEHNAKLKNELA
VAAPKADFVDNYVNASGSFGFREACKLLKAKEPEFRAFLIASNVMYVLGGKMTPRAPHIDAGRFTVKTGENLNNGHAFTQ
AKFTPKGIQWIAGLWASWQLNNQAA

Specific function: Unknown

COG id: COG3645

COG function: function code S; Uncharacterized phage-encoded protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29319; Mature: 29319

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNRLAVGCLLRAVFLCEQGSSLKGISDMKSMIAIEQEASMTSLDFLRNIINPARIEYGE
CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHCCCCC
PEVENRHFLSRIEDEIDDLGVAENFYVTTGQGASRAVKGYMLNMEQMTLIGMRESKAVRR
CCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHCCHHHHHEECCHHHHHHHH
SVLAKLKVMHCPVIPQSLPEALRLAADLAEHNAKLKNELAVAAPKADFVDNYVNASGSFG
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHCCCCCCC
FREACKLLKAKEPEFRAFLIASNVMYVLGGKMTPRAPHIDAGRFTVKTGENLNNGHAFTQ
HHHHHHHHHCCCCCCEEEEEHHCCHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEE
AKFTPKGIQWIAGLWASWQLNNQAA
ECCCHHHHHHHHHHHHHEECCCCCC
>Mature Secondary Structure
MRNRLAVGCLLRAVFLCEQGSSLKGISDMKSMIAIEQEASMTSLDFLRNIINPARIEYGE
CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHCCCCC
PEVENRHFLSRIEDEIDDLGVAENFYVTTGQGASRAVKGYMLNMEQMTLIGMRESKAVRR
CCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHCCHHHHHEECCHHHHHHHH
SVLAKLKVMHCPVIPQSLPEALRLAADLAEHNAKLKNELAVAAPKADFVDNYVNASGSFG
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHCCCCCCC
FREACKLLKAKEPEFRAFLIASNVMYVLGGKMTPRAPHIDAGRFTVKTGENLNNGHAFTQ
HHHHHHHHHCCCCCCEEEEEHHCCHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEE
AKFTPKGIQWIAGLWASWQLNNQAA
ECCCHHHHHHHHHHHHHEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA