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The map label for this gene is ybcS [C]

Identifier: 218929205

GI number: 218929205

Start: 2371306

End: 2371818

Strand: Direct

Name: ybcS [C]

Synonym: YPO2098

Alternate gene names: 218929205

Gene position: 2371306-2371818 (Clockwise)

Preceding gene: 218929204

Following gene: 218929206

Centisome position: 50.95

GC content: 51.07

Gene sequence:

>513_bases
ATGGCGACAATAAAACGCATTGCCTCCGGGTCTGCTTGTGCTGTTGCAGTCATCATCGCGATTGTTATTTCGGCGGGCAA
CGTAAGAACTAGCGAACGAGGACTTGAGCTGATCGGCAATGCTGAATCATGCCGCCGCGACCCATACGCTTGTCCGGCTG
GAGTACTGACTGATGGCATTGGCAACACTCATGGCGTCAAGGCTGGAGTTATTAAGACCGACACTCAGATAGCCGAAGAT
TGGGAAAAGAACATTCTTGATGCTGAACGCTGCGTCATTCGCTATGCAAATGGCAATAAATTACCGCCCAGCGCTTTTGA
TGCCGCTACGTCAATCAGCTTTAACGCCGGTTGCTCATTGATGCAGAAATCCACAATGTTCAAGTATTTTCGCGCTGGTA
ACGTGACAGCGGCCTGTGAACAGTTCCCGCGCTGGATATATGGTGGCGGTAAAAAATTGCCGGGGCTGGTGACTCGTCGC
GAGAAGGAGAAGGCGCTATGCCTGGAAAGTTAA

Upstream 100 bases:

>100_bases
TATTAACTGGCATTACAAGCGTAAAGAGTTTCAGTTGCGGGAGAAGGCTAATGAGTCCAGCTCTTCGTAAGAAAATACTT
GCAGCACATGGAGATGAGTG

Downstream 100 bases:

>100_bases
CTACTGCCCTCATTGCTGTAATTGCCGCCCTGCTTGTTGGTGTGACTTATTATCAGAACGAGGCGGCAAAACTTCAGCGT
GATGTAGTAGAAATAGCATC

Product: putative phage lysozyme

Products: Hydrolysed Peptidoglycan; Chitodextrin [C]

Alternate protein names: Phage-Related Lysozyme; Glycoside Hydrolase Family Protein; Phage Lysozyme; Glycoside Hydrolase Family; Phage Lysozyme Lysis Protein; Endolysin; Lysozyme Protein; Phage Related Lysozyme; Gifsy-2 Prophage Lysozyme; Bacteriophage Lysozyme; Lysis Protein; Phage Lysozome; Prophage; Glycoside Hydrolase Family Protein/Phage Lysozyme; Glycoside Hydrolase; Mur1 Protein; Prophage Lysozyme Responsible For Host Cell Lysis

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MATIKRIASGSACAVAVIIAIVISAGNVRTSERGLELIGNAESCRRDPYACPAGVLTDGIGNTHGVKAGVIKTDTQIAED
WEKNILDAERCVIRYANGNKLPPSAFDAATSISFNAGCSLMQKSTMFKYFRAGNVTAACEQFPRWIYGGGKKLPGLVTRR
EKEKALCLES

Sequences:

>Translated_170_residues
MATIKRIASGSACAVAVIIAIVISAGNVRTSERGLELIGNAESCRRDPYACPAGVLTDGIGNTHGVKAGVIKTDTQIAED
WEKNILDAERCVIRYANGNKLPPSAFDAATSISFNAGCSLMQKSTMFKYFRAGNVTAACEQFPRWIYGGGKKLPGLVTRR
EKEKALCLES
>Mature_169_residues
ATIKRIASGSACAVAVIIAIVISAGNVRTSERGLELIGNAESCRRDPYACPAGVLTDGIGNTHGVKAGVIKTDTQIAEDW
EKNILDAERCVIRYANGNKLPPSAFDAATSISFNAGCSLMQKSTMFKYFRAGNVTAACEQFPRWIYGGGKKLPGLVTRRE
KEKALCLES

Specific function: Essential For Lysis Of Bacterial Cell Wall, By Showing Cell Wall Hydrolyzing Activity (By Similarity). [C]

COG id: COG3772

COG function: function code R; Phage-related lysozyme (muraminidase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786768, Length=122, Percent_Identity=31.1475409836066, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.2.1.17 [C]

Molecular weight: Translated: 18174; Mature: 18043

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATIKRIASGSACAVAVIIAIVISAGNVRTSERGLELIGNAESCRRDPYACPAGVLTDGI
CCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHCCCCCCCCCHHHHCCC
GNTHGVKAGVIKTDTQIAEDWEKNILDAERCVIRYANGNKLPPSAFDAATSISFNAGCSL
CCCCCCCCCEEECCHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHCCCCCCCHHH
MQKSTMFKYFRAGNVTAACEQFPRWIYGGGKKLPGLVTRREKEKALCLES
HHHHHHHHHHHCCCCHHHHHHCCHHHHCCCCCCCCHHHHCCHHCCCCCCC
>Mature Secondary Structure 
ATIKRIASGSACAVAVIIAIVISAGNVRTSERGLELIGNAESCRRDPYACPAGVLTDGI
CCHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHCCCCCCCCCHHHHCCC
GNTHGVKAGVIKTDTQIAEDWEKNILDAERCVIRYANGNKLPPSAFDAATSISFNAGCSL
CCCCCCCCCEEECCHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHCCCCCCCHHH
MQKSTMFKYFRAGNVTAACEQFPRWIYGGGKKLPGLVTRREKEKALCLES
HHHHHHHHHHHCCCCHHHHHHCCHHHHCCCCCCCCHHHHCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Peptidoglycan (N-acetylmuraminic acid and N-acetyl-D-glucosamine Residues); Chitodextrin (N-acetyl-D-glucosamine residues) [C]

Specific reaction: Hydrolysis of beta-linkage between N-acetylmuraminic acid and N-acetyl- D-glucosamine residues in peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrin [C]

General reaction: O-Glycosyl bond hydrolysis; glycosyltransfer to saccharides other alcohols and H2O [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA