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The map label for this gene is mdtJ [H]

Identifier: 218929175

GI number: 218929175

Start: 2349046

End: 2349510

Strand: Direct

Name: mdtJ [H]

Synonym: YPO2068

Alternate gene names: 218929175

Gene position: 2349046-2349510 (Clockwise)

Preceding gene: 218929174

Following gene: 218929176

Centisome position: 50.48

GC content: 45.81

Gene sequence:

>465_bases
ATGCGTGTTAGGAGAAGAAAAGTGATTTATTGGATATTTTTAGGTCTGGCAATTATTGCTGAAATTATTGGCACCCTATC
AATGAAATATGCCAGTGTTAGCGGCGAGATGACCGGGCATATCGTGATGTATTTTATGATAACGGGCTCCTATGTCATGC
TCTCGTTAGCGGTTAAGAAAGTAGCATTGGGTGTGGCTTATGCGCTGTGGGAGGGGATCGGCATCCTTATTATTACTATT
TTCAGTGTGATGTGGTTTGGCGAGACGTTATCGCCACTGAAAATAGCCGGTTTAGTGACACTGATTGGTGGGATCCTCTT
GGTGAAATCGGGTACGCGGAAACCAAAACAACCGAACTGCCATCGCGGTAATCGACCCCCTTCGGTACAGGAATTAAAAA
CACAGACTACCGGCCATCATAAGGGTGTTGCTGTTGAGTCAGGTGAGCATCATGCAGCAGCTTGA

Upstream 100 bases:

>100_bases
CCAAGTGAGTATCTATTTCTTACGGACTGCGCAGGTTTATTCCTTGTGAATAAGGCACTGAAGCAGGATAGCCGTAACAA
ATAGACCTTAGCGTGCGTTT

Downstream 100 bases:

>100_bases
GTTTTACCCTATAGCTTTCTTGATCTTGGCCGTTATGCTGGAAATCGTCGCTAATATCTTGCTGAAAATGTCAGATGGCT
TTCGCCGAAAATGGTTGGGG

Product: putative integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MRVRRRKVIYWIFLGLAIIAEIIGTLSMKYASVSGEMTGHIVMYFMITGSYVMLSLAVKKVALGVAYALWEGIGILIITI
FSVMWFGETLSPLKIAGLVTLIGGILLVKSGTRKPKQPNCHRGNRPPSVQELKTQTTGHHKGVAVESGEHHAAA

Sequences:

>Translated_154_residues
MRVRRRKVIYWIFLGLAIIAEIIGTLSMKYASVSGEMTGHIVMYFMITGSYVMLSLAVKKVALGVAYALWEGIGILIITI
FSVMWFGETLSPLKIAGLVTLIGGILLVKSGTRKPKQPNCHRGNRPPSVQELKTQTTGHHKGVAVESGEHHAAA
>Mature_154_residues
MRVRRRKVIYWIFLGLAIIAEIIGTLSMKYASVSGEMTGHIVMYFMITGSYVMLSLAVKKVALGVAYALWEGIGILIITI
FSVMWFGETLSPLKIAGLVTLIGGILLVKSGTRKPKQPNCHRGNRPPSVQELKTQTTGHHKGVAVESGEHHAAA

Specific function: Catalyzes the excretion of spermidine [H]

COG id: COG2076

COG function: function code P; Membrane transporters of cations and cationic drugs

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small multidrug resistance (SMR) protein family. MdtJ subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787884, Length=113, Percent_Identity=66.3716814159292, Blast_Score=144, Evalue=3e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000390 [H]

Pfam domain/function: PF00893 Multi_Drug_Res [H]

EC number: NA

Molecular weight: Translated: 16803; Mature: 16803

Theoretical pI: Translated: 10.63; Mature: 10.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVRRRKVIYWIFLGLAIIAEIIGTLSMKYASVSGEMTGHIVMYFMITGSYVMLSLAVKK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VALGVAYALWEGIGILIITIFSVMWFGETLSPLKIAGLVTLIGGILLVKSGTRKPKQPNC
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
HRGNRPPSVQELKTQTTGHHKGVAVESGEHHAAA
CCCCCCCCHHHHHHHCCCCCCCEEEECCCCCCCC
>Mature Secondary Structure
MRVRRRKVIYWIFLGLAIIAEIIGTLSMKYASVSGEMTGHIVMYFMITGSYVMLSLAVKK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VALGVAYALWEGIGILIITIFSVMWFGETLSPLKIAGLVTLIGGILLVKSGTRKPKQPNC
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
HRGNRPPSVQELKTQTTGHHKGVAVESGEHHAAA
CCCCCCCCHHHHHHHCCCCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA