| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218929120
Identifier: 218929120
GI number: 218929120
Start: 2281530
End: 2281844
Strand: Reverse
Name: 218929120
Synonym: YPO2009a
Alternate gene names: NA
Gene position: 2281844-2281530 (Counterclockwise)
Preceding gene: 218929121
Following gene: 218929119
Centisome position: 49.03
GC content: 46.98
Gene sequence:
>315_bases ATGACTTACCGCCAGGCGCAAGACCGTTACGGTATTCAAGGCTGCTCTACCGTCTTGAAGTGGCTACGCAAGTACGGTCA ACTCGACTGGTCTTCCCCCTCTTCTACAAGAACGTGCAGAGCTAACATGCCTAAAATGCCTCTTACTCCCGAACAGCGAA TTAAAGAACTTGAACAGCAACTCGCTGAATCAGAAGTCAAAGCTCATTTTTTTGAAGCTGTTGTGAAGGTAATGAACACG GAGTTCGGAGCCACACTAACAAAAAAGCAGTTGGCCACATTATCACGCAAGCACAAACGCAAGGACTCACAGTAA
Upstream 100 bases:
>100_bases TACTGAGGAAAATGTGATGAACCAATATGTTAAACGCACGCAACGCGATTACCCTCTATCCTTTAAATTGACCGTTGTCC AACAGGTCTAAAAAGGTGAA
Downstream 100 bases:
>100_bases CGCGCGCGTGCCGGTTCATGGGGATTAGCCGACAGGCGTGGTATCAGTCTTTGCAGCGGGAACGCGGAAGAGAAATACAG GCCCAAAGTATCGTTGAACA
Product: hypothetical protein
Products: NA
Alternate protein names: ISPsy11 Transposase OrfA; Transposase OrfA; Cytoplasmic Protein; ISVisp4 Transposase OrfA
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MTYRQAQDRYGIQGCSTVLKWLRKYGQLDWSSPSSTRTCRANMPKMPLTPEQRIKELEQQLAESEVKAHFFEAVVKVMNT EFGATLTKKQLATLSRKHKRKDSQ
Sequences:
>Translated_104_residues MTYRQAQDRYGIQGCSTVLKWLRKYGQLDWSSPSSTRTCRANMPKMPLTPEQRIKELEQQLAESEVKAHFFEAVVKVMNT EFGATLTKKQLATLSRKHKRKDSQ >Mature_103_residues TYRQAQDRYGIQGCSTVLKWLRKYGQLDWSSPSSTRTCRANMPKMPLTPEQRIKELEQQLAESEVKAHFFEAVVKVMNTE FGATLTKKQLATLSRKHKRKDSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12078; Mature: 11947
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYRQAQDRYGIQGCSTVLKWLRKYGQLDWSSPSSTRTCRANMPKMPLTPEQRIKELEQQ CCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHH LAESEVKAHFFEAVVKVMNTEFGATLTKKQLATLSRKHKRKDSQ HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TYRQAQDRYGIQGCSTVLKWLRKYGQLDWSSPSSTRTCRANMPKMPLTPEQRIKELEQQ CCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHH LAESEVKAHFFEAVVKVMNTEFGATLTKKQLATLSRKHKRKDSQ HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA