| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218929118
Identifier: 218929118
GI number: 218929118
Start: 2280557
End: 2280955
Strand: Direct
Name: 218929118
Synonym: YPO2008
Alternate gene names: NA
Gene position: 2280557-2280955 (Clockwise)
Preceding gene: 218929117
Following gene: 218929123
Centisome position: 49.0
GC content: 41.35
Gene sequence:
>399_bases ATGTCAGCGATTGAACAGTTATCTTATTATCAAAAAAAATTGGCTTATGAAACAGACTCATGGGATCTGTATCTGGCATT AAAGAACAGCGAAAATGTCGTTGTGGTCGATGGACGCAGTAAAGAGGTGTACCAGAGGGAACATATTCCGGGAGCTATCA ACCAGCCTCACAAAGAAATCTGTTTTAATAACACTGAAAAGTTAGATAAAACAAAAATATATATCTGCTACTGTGATGGT ATTGGTTGTAATGCTTCTACCAAAACCGCGATGAAATTGATGACGCTGGGCTTTCAGGTAAAAGAATTGTTGGGAGGTCT GGACTGGTGGAAACGCGATGGTTATTCCACTGAGGGTATCGAGGGGAAAGAAGGTACACCGATTTCCTGCGGTTGCTGA
Upstream 100 bases:
>100_bases CTGTATGCCGGCAAACTCGCCAGTTCCCGCCAAGCCGTTGAACAGATTGCTGCAGCGTTGGATATTGAGCACAAATTTCC CTGTAAAAAATGAGGTTATT
Downstream 100 bases:
>100_bases GGATCCGGATATAGACCTGTCCTGATATAGGTTGACACTTTTTTGCCTTAAAACGCCTGATGAACTTCATCGGGCGTTTT GTATTTTAACGACAGATGAG
Product: putative rhodanese-like protein
Products: NA
Alternate protein names: Rhodanese Domain Protein; Rhodanese-Related Sulfurtransferase; Rhodanese-Like Protein; Rhodanese-Like Domain-Containing Protein; Rhodanese-Related Sulfurtransferase Protein; Rhodanese Sulfurtransferase; Transcriptional Regulator AraC Family; Rhodanese Domain Sulfurtransferase; Sulfurtransferase; Rhodanese Protein; Rhodanese-Like Sulfurtransferase
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MSAIEQLSYYQKKLAYETDSWDLYLALKNSENVVVVDGRSKEVYQREHIPGAINQPHKEICFNNTEKLDKTKIYICYCDG IGCNASTKTAMKLMTLGFQVKELLGGLDWWKRDGYSTEGIEGKEGTPISCGC
Sequences:
>Translated_132_residues MSAIEQLSYYQKKLAYETDSWDLYLALKNSENVVVVDGRSKEVYQREHIPGAINQPHKEICFNNTEKLDKTKIYICYCDG IGCNASTKTAMKLMTLGFQVKELLGGLDWWKRDGYSTEGIEGKEGTPISCGC >Mature_131_residues SAIEQLSYYQKKLAYETDSWDLYLALKNSENVVVVDGRSKEVYQREHIPGAINQPHKEICFNNTEKLDKTKIYICYCDGI GCNASTKTAMKLMTLGFQVKELLGGLDWWKRDGYSTEGIEGKEGTPISCGC
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14915; Mature: 14784
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAIEQLSYYQKKLAYETDSWDLYLALKNSENVVVVDGRSKEVYQREHIPGAINQPHKEI CCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEECCCHHHHHHHCCCCCCCCCHHHH CFNNTEKLDKTKIYICYCDGIGCNASTKTAMKLMTLGFQVKELLGGLDWWKRDGYSTEGI HCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCHHHHHHHCCCCHHHCCCCCCCCC EGKEGTPISCGC CCCCCCCCCCCC >Mature Secondary Structure SAIEQLSYYQKKLAYETDSWDLYLALKNSENVVVVDGRSKEVYQREHIPGAINQPHKEI CHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEECCCHHHHHHHCCCCCCCCCHHHH CFNNTEKLDKTKIYICYCDGIGCNASTKTAMKLMTLGFQVKELLGGLDWWKRDGYSTEGI HCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCHHHHHHHCCCCHHHCCCCCCCCC EGKEGTPISCGC CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA