| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
Click here to switch to the map view.
The map label for this gene is 218929116
Identifier: 218929116
GI number: 218929116
Start: 2279186
End: 2279722
Strand: Direct
Name: 218929116
Synonym: YPO2006
Alternate gene names: NA
Gene position: 2279186-2279722 (Clockwise)
Preceding gene: 218929114
Following gene: 218929117
Centisome position: 48.98
GC content: 55.31
Gene sequence:
>537_bases GTGGCCATTGAGCATGATTGCTCGGTACACGGTAAAAGCGTGGCGCACCAGCTGAGTGCCTCGATAAAACCGGCAGAAGA CCCTCAACAAGCTGCGACTACCTTTTTTGCCGGTAGTTTCTCGTATGCGCTGGAGCGGGCAGCCAACTGGGCACACGACT CTCCTGGAGGTGCTCGTCTGATCTTGGCGGATGATGCGTTTTCTGCAGAACTGGTGCCCGCACTGCTGGCCAGAGGTATC GACTTAGGTTCAAGACAGATTTATGTAGCGGCGATAGCCCCGCAACCCATAGGCGAAAAAGCTTCCACGCTGGCTTCTGC TTGGCACCAACGCTGGGGGGGAACGCCTGGAGGCTATTTTTGGGAAACGATGGCGGCCTTGCAGGTTGCCAGCCAGTATC CTGATTTTCCTGCACAAACCCTGCTGGGAGCGCTGAATTTTGACGCACAGCATGAGAGTCATCCTGCCAGTTTTTCACTC TGGCTGGCTACGCATCGTGGACTGCAGATTGTCCTGACTCCAGAGGTAAGCATATGA
Upstream 100 bases:
>100_bases ACATCTGACCACGTATCCTACCACCTGGCGTTTATGTGATAACGATGAGGATTATGTCATATGGTTATTACCGCTACTAA CGTCTCATGGGCAGGATGCC
Downstream 100 bases:
>100_bases ATATTAATACAGTTCCGCTGGCAACGGATTTTGCCAATCTGCTGGCTGCCCGGCGACTATTTTTCGGTAAGGGAGCACAA CATGAAACCGATTATGGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MAIEHDCSVHGKSVAHQLSASIKPAEDPQQAATTFFAGSFSYALERAANWAHDSPGGARLILADDAFSAELVPALLARGI DLGSRQIYVAAIAPQPIGEKASTLASAWHQRWGGTPGGYFWETMAALQVASQYPDFPAQTLLGALNFDAQHESHPASFSL WLATHRGLQIVLTPEVSI
Sequences:
>Translated_178_residues MAIEHDCSVHGKSVAHQLSASIKPAEDPQQAATTFFAGSFSYALERAANWAHDSPGGARLILADDAFSAELVPALLARGI DLGSRQIYVAAIAPQPIGEKASTLASAWHQRWGGTPGGYFWETMAALQVASQYPDFPAQTLLGALNFDAQHESHPASFSL WLATHRGLQIVLTPEVSI >Mature_177_residues AIEHDCSVHGKSVAHQLSASIKPAEDPQQAATTFFAGSFSYALERAANWAHDSPGGARLILADDAFSAELVPALLARGID LGSRQIYVAAIAPQPIGEKASTLASAWHQRWGGTPGGYFWETMAALQVASQYPDFPAQTLLGALNFDAQHESHPASFSLW LATHRGLQIVLTPEVSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19006; Mature: 18875
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIEHDCSVHGKSVAHQLSASIKPAEDPQQAATTFFAGSFSYALERAANWAHDSPGGARL CCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCEEE ILADDAFSAELVPALLARGIDLGSRQIYVAAIAPQPIGEKASTLASAWHQRWGGTPGGYF EEECCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHH WETMAALQVASQYPDFPAQTLLGALNFDAQHESHPASFSLWLATHRGLQIVLTPEVSI HHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEEECCCEEEEECCCCCC >Mature Secondary Structure AIEHDCSVHGKSVAHQLSASIKPAEDPQQAATTFFAGSFSYALERAANWAHDSPGGARL CCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCEEE ILADDAFSAELVPALLARGIDLGSRQIYVAAIAPQPIGEKASTLASAWHQRWGGTPGGYF EEECCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHH WETMAALQVASQYPDFPAQTLLGALNFDAQHESHPASFSLWLATHRGLQIVLTPEVSI HHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEEECCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA